Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 3e-28
seq5 131 1e-25
seq8 123 2e-23
seq1 122 8e-23
seq2 118 9e-22
seq4 107 2e-18
seq9 87.8 2e-12
>seq6
Length=30401905
Score = 140 bits (154), Expect = 3e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||||| || ||||| || || |||||||| ||| || ||||| ||||||
Sbjct 27218344 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 27218285
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || |||||| |||||||||||||||| || || || ||||||||||||||
Sbjct 27218284 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 27218225
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | |||||||| | ||| ||||||| ||| | || ||
Sbjct 27218224 GATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTT 27218165
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || || || ||||| ||||||||
Sbjct 27218164 GCCGGTGAGGGTCTTCACAAAGATCTGCAT 27218135
Score = 120 bits (132), Expect = 3e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || ||||| || |||||||||||||| || ||||| ||||||
Sbjct 26903066 CACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGTCCATCCTC 26903007
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || || ||||||| |||||||| || || || || |||||||||||
Sbjct 26903006 GAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTG 26902947
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| || || | ||| ||||| | || | || ||
Sbjct 26902946 GATCTTCGCCTTCACGTTGTCGATCGTATCAGAAGACTCAACCTCAAGCGTAATGGTCTT 26902887
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||||||||| || || ||||||||||||||| ||
Sbjct 26902886 GCCGGTCAGGGTCTTGACAAAAATCTGCATGCCT 26902853
Score = 116 bits (128), Expect = 3e-21
Identities = 154/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || |||||||| |||||||||||||| || || || |||||
Sbjct 26902838 CACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACCGTCCTC 26902779
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || |||||||||||||||| || ||||| || |||||||||||
Sbjct 26902778 AAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTG 26902719
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| ||||||| ||||||||||| || | || ||
Sbjct 26902718 GATCTTCGCCTTCACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTT 26902659
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| |||| || || ||||| ||||||||| ||
Sbjct 26902658 TCCTGTCAAGGTCTTCACAAAGATCTGCATGCCT 26902625
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || ||||||||||| | ||||| |||||| || ||
Sbjct 26902604 GTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTG 26902545
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||||||||| ||||| || || || ||||||||||||||| ||| ||
Sbjct 26902544 CTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTT 26902485
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | || || | | ||| ||||||| ||| | || ||||| ||
Sbjct 26902484 GGCCTTCACATCGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 26902425
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||||||
Sbjct 26902424 GAGTGTCTTCACAAAGATCTGCAT 26902401
Score = 95.1 bits (104), Expect = 1e-14
Identities = 332/510 (65%), Gaps = 10/510 (2%)
Strand=Plus/Minus
Query 44794 CGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATAACTTTGGC 44853
||||||| | |||||||| ||||| ||| | || |||| | || || ||
Sbjct 1929885 CGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATCGACGGCGGCGAGCGC---TTCGC 1929829
Query 44854 CGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTT-TGCGG 44912
||| || | ||||| |||||| ||||| || | ||||| ||||| || ||||
Sbjct 1929828 CGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGC 1929769
Query 44913 CGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGA 44972
| || || | | || | ||| | ||||| || || || || |||||| | |
Sbjct 1929768 C-ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCA 1929710
Query 44973 TTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGAGTCG 45032
| || | ||||| || || ||| | |||| ||||||||| || || || ||
Sbjct 1929709 TCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTC--CTCTACGACCTCCTCCG 1929652
Query 45033 ATCAAAAGTTGGACGCGCCCACCGTCAACGACATGTTCTCCGAAGCCGTGGCCATCGAGA 45092
|| | | |||| | | |||| | || || || |||| ||||||| ||||||||
Sbjct 1929651 CGGCAA-GCTCGACGAGGCACGCGTCCAGGAGATCGTCGCCGACGCCGTGGACATCGAGA 1929593
Query 45093 TGGAATTTTT-TGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAACGCGAATATGATG 45151
||| || | ||| || || || |||| || | || || ||||||| | | |||
Sbjct 1929592 GGGAGTTCGTCTGC-GACGCGCTCCCCGTCGCGCTCGTCGGGATGAACGGCGAGCTCATG 1929534
Query 45152 AGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCAGTTAAAGTATCCCAAGATG 45211
|| ||||||| ||||| |||||||| || || ||| | | | || ||||||
Sbjct 1929533 AGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTCGGGTGCAAGAAGATG 1929474
Query 45212 TACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTTGGAGGGCAAAACTAAt 45271
||| | | ||||| ||||| | ||| | || || || ||||||| || ||
Sbjct 1929473 TACAACGTCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAAC 1929414
Query 45272 ttttttGAGAAACGCGTCGGCGAATACAAG 45301
|| || ||||| ||||||||||| ||| ||
Sbjct 1929413 TTCTTCGAGAAGCGCGTCGGCGACTACCAG 1929384
Score = 87.8 bits (96), Expect = 2e-12
Identities = 88/113 (78%), Gaps = 1/113 (1%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| ||| ||||| || || ||||||||||| | ||||| ||||||
Sbjct 27218879 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 27218820
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGAT-CGGGAGGTATGCCCTCC 118640
||||| || ||||| |||| ||||||||||| | |||| || |||||||||
Sbjct 27218819 AAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGGATGCCCTCC 27218767
>seq5
Length=25164199
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | |||||||| || ||||||||||| || | ||||| ||||||
Sbjct 21087698 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 21087757
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| ||||||| | |||||| || || || ||||||||||| ||
Sbjct 21087758 CAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTG 21087817
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | |||||||| |||||| ||||| | ||| | || ||
Sbjct 21087818 GATCTTCGCCTTCACGTTATCAATGGTGTCCGAGCTCTCAACCTCAAGGGTAATAGTCTT 21087877
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || || ||||||||||||||
Sbjct 21087878 GCCAGTGAGTGTCTTGACAAAAATCTGCAT 21087907
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || || || || |||||||| || | |||||| ||| ||||||||
Sbjct 21088388 GTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTG 21088447
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| |||||| |||||||||||||||| || || || || ||||||||||| || ||
Sbjct 21088448 CTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTT 21088507
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | ||| |||| | ||| ||||| | ||| | || ||||| ||
Sbjct 21088508 GGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGT 21088567
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||| ||||||||
Sbjct 21088568 GAGAGTCTTCACAAAGATCTGCAT 21088591
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || ||||||||||| ||| | ||||| ||| ||
Sbjct 21087470 CACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCTTC 21087529
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| || |||||||| || || || || || ||||| ||
Sbjct 21087530 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTATCCTG 21087589
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||| | |||||| ||||| | || | || ||
Sbjct 21087590 GATCTTAGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTCTT 21087649
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || ||||| || ||||| ||||||||
Sbjct 21087650 GCCAGTGAGAGTCTTGACAAAGATCTGCAT 21087679
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||||| || ||||| || || |||||||| ||| | ||||| |||||
Sbjct 3097280 CACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 3097339
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||| || || ||| ||||||| |||||||| || || || || || ||||||||
Sbjct 3097340 GAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTG 3097399
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||| ||||| | || | || ||
Sbjct 3097400 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTT 3097459
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 3097460 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 3097489
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || | || | |||||||||||| || |||
Sbjct 21088167 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 21088226
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| ||||||||||| || || || || ||||||||||| || ||| |||
Sbjct 21088227 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 21088286
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||| || | ||| ||||| | ||| | || ||||| |||| ||
Sbjct 21088287 ACGTTGTCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTC 21088346
Query 118722 TTTACAAAAATCTGCATGGCT 118742
|| ||||| || |||||| ||
Sbjct 21088347 TTGACAAAGATTTGCATGCCT 21088367
>seq8
Length=23026653
Score = 123 bits (136), Expect = 2e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || ||||| || ||||||||||| || | ||||| |||||||
Sbjct 4139833 CAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGA 4139892
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || ||| ||||||| |||||||| || ||||| || ||||||||||| |
Sbjct 4139893 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGA 4139952
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| |||||||| | ||| ||||| | ||| | | ||||
Sbjct 4139953 TCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGC 4140012
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||| || || ||||| ||||||||
Sbjct 4140013 CGGTCAGGGTCTTCACAAAGATCTGCAT 4140040
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| || ||||| || ||||||||||| || | ||||| |||||||
Sbjct 4124569 CAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGA 4124628
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCT--GCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||| || || ||| ||||||| |||| |||| || || | ||||||||||||||
Sbjct 4124629 GCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGGTCTGGGGAAATGCCCTCCTTGTCCTG 4124688
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||| || || | |||| |||||| | ||| ||||| | ||| | | ||
Sbjct 4124689 GATCTTTGCCTTCACATTGTCGATGGTGTCTGATGACTCCACCTCAAGGGTGATGGACTT 4124748
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||||||| || ||||| ||||||||
Sbjct 4124749 GCCGGTCAGAGTCTTCACAAAGATCTGCAT 4124778
Score = 96.9 bits (106), Expect = 3e-15
Identities = 110/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| || || ||| ||||||| |||||||| || ||||| || |||||||||||| |
Sbjct 4139030 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCTTGGA 4139089
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | |||| |||||||| | ||| ||||| | ||| | | ||||
Sbjct 4139090 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGC 4139149
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || ||||| ||||||||
Sbjct 4139150 CGGTTAGGGTCTTCACAAAGATCTGCAT 4139177
>seq1
Length=43445878
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || || |||||||| ||| | |||||| |||||
Sbjct 9972236 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 9972177
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| ||||||| |||||||| ||||| || || |||||||||||
Sbjct 9972176 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTG 9972117
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||| ||||| | || | ||| ||
Sbjct 9972116 GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTT 9972057
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 9972056 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 9972027
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || || |||||||| ||| | |||||| |||||
Sbjct 9981444 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 9981385
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| ||||||| |||||||| ||||| || || |||||||||||
Sbjct 9981384 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTG 9981325
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||| ||||| | || | ||| ||
Sbjct 9981324 GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTT 9981265
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 9981264 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 9981235
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || ||||| || || |||||||| ||| || ||||| |||||
Sbjct 21648093 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTC 21648152
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| ||||||| |||||||| || || || || |||||||||||
Sbjct 21648153 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 21648212
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
| || || || | | || ||||| ||||||| ||||| | || | || ||
Sbjct 21648213 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 21648272
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || || || ||||||||
Sbjct 21648273 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 21648302
>seq2
Length=36083738
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || || |||||||| ||| || ||||| ||||||
Sbjct 2262219 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCCTC 2262278
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || |||||| |||| ||||||||||| || || || || |||||||||||
Sbjct 2262279 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 2262338
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | |||||| | |||||| ||||| | || | || ||
Sbjct 2262339 GATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTT 2262398
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || || || ||||||||
Sbjct 2262399 CCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||||| || ||||| || || |||||||| || | || | ||||||
Sbjct 2262447 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTC 2262506
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| ||||||| |||||||| || || || ||||||||||||||
Sbjct 2262507 CAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 2262566
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| |||||| ||||| | ||| | || ||
Sbjct 2262567 GATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTT 2262626
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| || || || || ||||| ||||||||
Sbjct 2262627 GCCTGTGAGGGTCTTGACAAAGATCTGCAT 2262656
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || || |||||||| || | || | |||||| |||||
Sbjct 2262998 GTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTG 2263057
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||||||||||||||| || || || |||||||||||||| || ||
Sbjct 2263058 CTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 2263117
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| | | ||| ||||||| ||| | || ||||||||
Sbjct 2263118 GGCCTTGACATTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGT 2263177
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||| ||||||||
Sbjct 2263178 CAATGTCTTCACAAAGATCTGCAT 2263201
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| | || | |||||| ||||| || |||
Sbjct 2262777 GTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2262836
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| ||||||| |||||||| || || || |||||||||||||| || || ||
Sbjct 2262837 GCAAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2262896
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| | ||| ||||| | ||| | || ||||||||||||||
Sbjct 2262897 ACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTC 2262956
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 2262957 TTGACGAAGATCTGCATG 2262974
>seq4
Length=32292456
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || ||||| || || | ||||| |||||
Sbjct 28749969 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28749910
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| ||||||| |||||||| || ||||| ||||||||||| ||
Sbjct 28749909 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28749850
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | | ||| ||||| | ||| | ||| |||
Sbjct 28749849 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 28749790
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||| ||||||||
Sbjct 28749789 CCAGTAAGGGTCTTCACAAAGATCTGCAT 28749761
Score = 105 bits (116), Expect = 6e-18
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || ||||| |||||||| || | ||||| |||||||||||| || |||
Sbjct 28749729 GTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCA 28749670
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||||||||||||||| || || || || ||||||||||| || || ||
Sbjct 28749669 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 28749610
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||||||||| | ||| | || |||||||| || ||
Sbjct 28749609 ACATTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTC 28749550
Query 118722 TTTACAAAAATCTGCATGGCT 118742
|| || || || |||||| ||
Sbjct 28749549 TTCACGAATATTTGCATGCCT 28749529
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || ||||| || || | ||||| |||||
Sbjct 28750197 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750138
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| ||||||| |||||||| || ||||| ||||||||||| ||
Sbjct 28750137 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750078
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | | ||| ||||| | ||| | || |||
Sbjct 28750077 ATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTG 28750018
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || || ||||||||
Sbjct 28750017 CCGGTGAGGGTCTTCACGAAGATCTGCAT 28749989
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || ||||| || || | ||||| |||||
Sbjct 28750425 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750366
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| ||||||| |||||||| || ||||| ||||||||||| ||
Sbjct 28750365 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750306
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||||| | | ||| ||||| | ||| | || |||
Sbjct 28750305 ATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTG 28750246
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || || ||||||||
Sbjct 28750245 CCGGTGAGGGTCTTCACGAAGATCTGCAT 28750217
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||| ||||| | ||| ||| |||||| ||||| || |||
Sbjct 28749501 GTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCA 28749442
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| || |||||||| || ||||| ||||||||||| || ||| || ||
Sbjct 28749441 GCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGAATCTTAGCCTTC 28749382
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | || || | | ||| ||||| | ||| | || ||||| || || ||
Sbjct 28749381 ACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTC 28749322
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 28749321 TTAACGAATATCTGCAT 28749305
>seq9
Length=22605696
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | || ||||| || ||||||||||| ||| || ||||| ||||||
Sbjct 13618181 CACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 13618240
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCC 118636
|||||| || || ||| |||||||||||||||| || || || || ||
Sbjct 13618241 GAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGGGATACC 13618288
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || ||||||||||| ||| || |||||| ||| ||
Sbjct 12264456 ACCAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCC 12264397
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||||| || || ||| | || | |||||| ||||| ||||| || || ||||||||
Sbjct 12264396 AGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTC 12264341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433779176560096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |