Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq6 116 4e-21 seq2 113 5e-20 seq5 111 2e-19 seq4 111 2e-19 seq8 104 3e-17 >seq1 Length=43445878 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| || ||||| || || |||| || Sbjct 21648093 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTC 21648152 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | ||| | | |||||||||| Sbjct 21648153 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 21648212 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | || |||| || | ||||||||| ||||| || | ||||||||| || Sbjct 21648213 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 21648272 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || ||||| || ||||| ||||| Sbjct 21648273 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 21648302 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || ||| |||| || |||||||| || ||||| Sbjct 9972218 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 9972159 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| ||| | | |||||||||| ||| || || | ||| Sbjct 9972158 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 9972100 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | |||||| || || ||||| || ||||| | Sbjct 9972099 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 9972040 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 9972039 CGAAGATCTGCATCTT 9972024 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || ||| |||| || |||||||| || ||||| Sbjct 9981426 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 9981367 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| ||| | | |||||||||| ||| || || | ||| Sbjct 9981366 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 9981308 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | |||||| || || ||||| || ||||| | Sbjct 9981307 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 9981248 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 9981247 CGAAGATCTGCATCTT 9981232 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117 |||||| || || || ||| ||||||||| |||| |||||||||||||||| ||||| Sbjct 24127564 AAAATTATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACT 24127623 Query 60118 CACCACTATACTAC 60131 |||||||||||||| Sbjct 24127624 CACCACTATACTAC 24127637 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| | |||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 29638799 AAACAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 29638740 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 29638739 TCACCACTATACTAC 29638725 >seq6 Length=30401905 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || ||||| |||||||||||||| ||||| |||| || |||||||| || || || Sbjct 26902820 CTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCAAA 26902761 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 26902760 GATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 26902701 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| ||| || || |||| |||||||| || || || | ||||| || Sbjct 26902700 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 26902641 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 26902640 AAAGATCTGCAT 26902629 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||||| ||| |||||| ||||| |||||||||||||| || || | || || Sbjct 26903066 CACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGTCCATCCTC 26903007 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || || || ||||| ||||||||||| | || | | |||||||||| Sbjct 26903006 GAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTG 26902947 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | ||| || || || || || | ||| ||||| | Sbjct 26902946 GATCTTCGCCTTCA-CGTTGTCGATCGTATCAGAAGACTCAACCTCAAGCGTAATGGTCT 26902888 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| ||||| || ||||| Sbjct 26902887 TGCCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || |||||||| |||||||| Sbjct 27218326 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 27218267 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 27218266 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 27218207 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 27218206 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 27218147 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 27218146 AAAGATCTGCAT 27218135 >seq2 Length=36083738 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || |||| |||| || | ||| | ||| |||||| || || ||||| || || Sbjct 2262746 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 2262805 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | || || |||||||| ||||| || ||||| ||||||||||| | || Sbjct 2262806 AAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 2262865 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | || |||||||||| ||| || |||| ||| | | | ||||| || |||| Sbjct 2262866 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAAGACTCCA 2262924 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 2262925 CCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2262973 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| ||||| || Sbjct 2262465 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2262524 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 2262525 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2262583 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | |||||||| ||||| || || |||| Sbjct 2262584 TGTCGATGGTGTCCGAGCTC---TCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCT 2262640 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 2262641 TGACAAAGATCTGCAT 2262656 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| ||||| || Sbjct 2263010 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2263069 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 2263070 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 2263129 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || ||||| |||| ||||| || ||||| || | ||||| || Sbjct 2263130 GTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 2263189 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 2263190 AAAGATCTGCAT 2263201 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| || | ||| |||||| || || ||||| || ||||| || || | || || Sbjct 2262219 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCCTC 2262278 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| |||||||| || || ||||||||||| | || | | |||||||||| Sbjct 2262279 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 2262338 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 43150 ||| || || | | | | ||||| |||| || || || | |||||||| Sbjct 2262339 GATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC---TCAACCTCCAAAGTGATGGT 2262395 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || | ||||| || ||||| ||||| Sbjct 2262396 CTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428 >seq5 Length=25164199 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || |||| |||| || | ||| | ||| |||||| || || ||||| || || Sbjct 21087908 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 21087967 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || | |||| || |||||||| ||||| || || || ||||||||||| | || Sbjct 21087968 GAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCTGGGGG 21088027 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | || |||||||||| ||| || |||| ||| | | | |||||| || || | Sbjct 21088028 AATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGTTGTCGATCGTGTCTGATGACTCGA 21088086 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | ||| ||||| ||||| || || ||||| || ||||| |||||| Sbjct 21088087 CCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCATT 21088136 Score = 104 bits (114), Expect = 3e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 3097298 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3097357 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | ||||||||| ||| || || | ||| Sbjct 3097358 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3097416 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||||||| || ||||| || ||||| | Sbjct 3097417 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3097476 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 3097477 CGAAGATCTGCATCTT 3097492 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| || || ||| | || || |||||||| |||||||| Sbjct 21088401 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 21088460 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 21088461 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 21088520 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | || || || || || || | || ||||| ||||| || || ||||| ||| Sbjct 21088521 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 21088580 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 21088581 AAGATCTGCAT 21088591 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| ||||| || Sbjct 21088172 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 21088231 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | |||||||||| || | |||| | | ||| Sbjct 21088232 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC-TGGATCTTTGCCTTAACGT 21088290 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || || || || | ||||| || ||||| || | ||||| | Sbjct 21088291 TGTCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 21088350 Query 43171 CAAAGATTTGCAT 43183 ||||||||||||| Sbjct 21088351 CAAAGATTTGCAT 21088363 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 ||||| || || || ||| ||||||||| |||| |||||||||||||||| |||||| Sbjct 20807525 AAATTGTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATACTC 20807584 Query 60119 ACCACTATACTAC 60131 ||||||||||||| Sbjct 20807585 ACCACTATACTAC 20807597 >seq4 Length=32292456 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||||| ||| |||||| || || || || ||||| || || || |||| || Sbjct 28749969 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28749910 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| ||||| ||||||||||| | || | || |||||| ||| | Sbjct 28749909 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28749850 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | |||||| || || || || | ||||| || ||| Sbjct 28749849 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 28749790 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| |||||||| ||||| Sbjct 28749789 CCAGTAAGGGTCTTCACAAAGATCTGCAT 28749761 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||||| ||| |||||| || || || || ||||| || || || |||| || Sbjct 28750197 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750138 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| ||||| ||||||||||| | || | || |||||| ||| | Sbjct 28750137 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750078 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | |||||| || || || || | |||||||| ||| Sbjct 28750077 ATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTG 28750018 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || ||||| ||||| Sbjct 28750017 CCGGTGAGGGTCTTCACGAAGATCTGCAT 28749989 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||||| ||| |||||| || || || || ||||| || || || |||| || Sbjct 28750425 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750366 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| ||||| ||||||||||| | || | || |||||| ||| | Sbjct 28750365 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750306 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | |||||| || || || || | |||||||| ||| Sbjct 28750305 ATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTG 28750246 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || ||||| ||||| Sbjct 28750245 CCGGTGAGGGTCTTCACGAAGATCTGCAT 28750217 Score = 104 bits (114), Expect = 3e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 ||||| ||| |||||| || || || ||||| || ||||| ||| | || || |||||| Sbjct 28749507 TGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGC 28749448 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || |||||||| || || ||||||||||| | || | || |||||| ||| ||| | || Sbjct 28749447 TTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC-TGAATCTT 28749389 Query 43101 TG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | || | | | | ||| ||| || || || || | |||||||| ||||| || Sbjct 28749388 AGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGT 28749329 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || || || ||||| Sbjct 28749328 GAGGGTCTTAACGAATATCTGCAT 28749305 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || ||||| || || || || || | || || |||||||| ||||| || Sbjct 28749723 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 28749664 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 28749663 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 28749604 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||| ||| || || || | || ||||| ||||| || || ||||| || Sbjct 28749603 TCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 28749544 Query 43173 AAGATTTGCAT 43183 || |||||||| Sbjct 28749543 AATATTTGCAT 28749533 >seq8 Length=23026653 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| ||||| || || || | || || |||||||| || ||||| Sbjct 4139849 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCGGCGAA 4139908 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 4139909 GATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 4139968 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || ||||| || | ||||||| ||||| || || ||||| || Sbjct 4139969 GTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCAC 4140028 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 4140029 AAAGATCTGCAT 4140040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571748352888640