Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq6 138 7e-28
seq1 134 9e-27
seq4 125 5e-24
seq5 120 2e-22
seq2 105 4e-18
seq8 104 2e-17
seq3 91.5 1e-13
seq10 87.8 1e-12
seq9 87.8 1e-12
seq7 87.8 1e-12
>seq6
Length=30401905
Score = 138 bits (152), Expect = 7e-28
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231
||||| ||||| ||||| | || || ||||| ||||||||||||| ||| |||
Sbjct 27218352 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 27218293
Query 34232 TCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCC 34291
| || || | ||||||||| ||||| ||||| ||||||||||| ||| | || ||||
Sbjct 27218292 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 27218233
Query 34292 TTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTG 34351
||||| ||||| ||| | || | | || | || | || || || || | |||
Sbjct 27218232 TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTG 27218173
Query 34352 ATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| ||||||||||| || ||||||||||||||||||
Sbjct 27218172 ATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC 27218134
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | |||||| ||||| ||||| | ||| |||||||| |||||||| || | |
Sbjct 26902855 CCTCCCCTCAGCCTAAGCACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCC 26902796
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| || || ||||| ||||||||||| ||
Sbjct 26902795 AGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGG 26902736
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | | |||| || | ||| |||||
Sbjct 26902735 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCCGACGACTCGACC 26902676
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | |||||||| || || || | || |||||||||||||||||
Sbjct 26902675 TCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 26902629
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| || || || ||||| |||||||| || | ||| || | ||
Sbjct 26903068 AGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGTCCATCC 26903009
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||||||||| || ||||| ||||||||||| ||| | | |||||||||
Sbjct 26903008 TCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC 26902949
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | |||| ||| | || || || || | ||| |||||
Sbjct 26902948 TGGATCTTCGCCTTCACGTTGTCGATCGTATCAGAAGACTCAACCTCAAGCGTAATGGTC 26902889
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || || ||||| ||||||||
Sbjct 26902888 TTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||| || | || ||| | || || | |||||||| || ||
Sbjct 26902591 TCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAAG 26902532
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| || |||||||| || | || ||||||||| ||||| ||| | ||||
Sbjct 26902531 ATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTCACATCG 26902472
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | || || || || | |||||||| ||||| ||||| || ||||||
Sbjct 26902471 TCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACA 26902412
Query 34379 AAGATCTGCATC 34390
||||||||||||
Sbjct 26902411 AAGATCTGCATC 26902400
>seq1
Length=43445878
Score = 134 bits (148), Expect = 9e-27
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 21648076 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21648135
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281
||| ||| |||| |||| ||||||||| ||||| |||||||||||||||| || ||||
Sbjct 21648136 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 21648195
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTA-GATCGGCTATCGAATCGGTCGATTCGA 34340
| | ||||||||| | ||| ||| | | || | |||| ||| | || |
Sbjct 21648196 -ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTG-GATCGTGTCGCTGCTCTCCA 21648253
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
| |||| ||||||||| || || || || || ||||| ||||||||||||
Sbjct 21648254 CCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 21648303
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| |||||||||||||
Sbjct 9972253 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9972194
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||| ||||||||| ||||| |||||||||||||||||| ||
Sbjct 9972193 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9972134
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | || | || || ||
Sbjct 9972133 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9972074
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||| |||||| || || || || || || ||||| ||||||||||||
Sbjct 9972073 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 9972026
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| |||||||||||||
Sbjct 9981461 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9981402
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| |||| ||||||||| ||||| |||||||||||||||||| ||
Sbjct 9981401 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9981342
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | || | || || ||
Sbjct 9981341 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9981282
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||| |||||| || || || || || || ||||| ||||||||||||
Sbjct 9981281 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 9981234
Score = 111 bits (122), Expect = 1e-19
Identities = 174/246 (71%), Gaps = 5/246 (2%)
Strand=Plus/Plus
Query 34150 GATTTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTAT 34209
||| |||| | |||| ||| || | ||||| ||||| | || || ||||| ||
Sbjct 21638746 GATGTCGTTCATGCCGCGGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGAT 21638805
Query 34210 GTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTG 34269
||||||||||| |||| ||| |||| |||| ||||||||| ||||| |||||||||||
Sbjct 21638806 GTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTG 21638865
Query 34270 CTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAAT 34328
||||| || |||| |||| |||| ||||| ||| | ||| | | | | ||| |
Sbjct 21638866 CTGGTGCGGCGGG-ACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGT 21638924
Query 34329 CGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGAT---CT 34385
|| ||||| | | ||||||||| | ||| | || || ||||| || || ||
Sbjct 21638925 CGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCACGAATATCAGCT 21638984
Query 34386 GCATCG 34391
||||||
Sbjct 21638985 GCATCG 21638990
>seq4
Length=32292456
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| || || || ||||| ||||| ||||| | || ||| ||||
Sbjct 28750200 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCC 28750141
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| ||||||||||||||||| || | || |||||| ||
Sbjct 28750140 TCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCC 28750081
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | |||| || || || |||| ||||||||
Sbjct 28750080 TGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTC 28750021
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||||||| || ||||| |||||||||||
Sbjct 28750020 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28749989
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| || || || ||||| ||||| ||||| | || ||| ||||
Sbjct 28750428 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCC 28750369
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| ||||||||||||||||| || | || |||||| ||
Sbjct 28750368 TCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCC 28750309
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | |||| || || || |||| ||||||||
Sbjct 28750308 TGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTC 28750249
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||||||||| || ||||| |||||||||||
Sbjct 28750248 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28750217
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| || || || ||||| ||||| ||||| | || ||| ||||
Sbjct 28749972 AGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCC 28749913
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| ||||||||||||||||| || | || |||||| ||
Sbjct 28749912 TCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCC 28749853
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | |||| || | || || || |||| ||||| ||
Sbjct 28749852 TGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTC 28749793
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || || || |||||||||||||||||
Sbjct 28749792 TTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 28749761
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | ||| || ||||| | || ||| || || ||||||||||| |
Sbjct 28749759 CCGCCCCGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCA 28749700
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || || | |||||| || || || ||||| ||||||||||| ||
Sbjct 28749699 AGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGG 28749640
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | |||| || | ||| |||||
Sbjct 28749639 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCGATCGTGTCAGACGACTCGACC 28749580
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || ||||| ||||||||||| || ||||| || || |||||
Sbjct 28749579 TCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCAT 28749533
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || ||||| || || || ||||| ||||| || || | || ||| | ||
Sbjct 28749516 AGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCC 28749457
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| || || ||||||||||| || | || |||||| ||
Sbjct 28749456 TCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCC 28749397
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | |||| ||||| || || || |||| ||||||||
Sbjct 28749396 TGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTC 28749337
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
||||| ||||| || || || || |||||||||
Sbjct 28749336 TTGCCAGTGAGGGTCTTAACGAATATCTGCATC 28749304
Score = 84.2 bits (92), Expect = 1e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34256 AAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA 34315
|| ||||||||||||||||| || | || |||||| || ||||| ||| | |
Sbjct 28750578 AAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 28750519
Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375
| | | || | |||| || || || |||| |||||||| ||||||||||| || |||
Sbjct 28750518 TTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 28750459
Query 34376 ACAAAGATCTGCAT 34389
|| |||||||||||
Sbjct 28750458 ACGAAGATCTGCAT 28750445
>seq5
Length=25164199
Score = 120 bits (132), Expect = 2e-22
Identities = 149/203 (73%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| ||||||||||| | ||| || | || || | ||||||||| |||||
Sbjct 21088400 TTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAA 21088459
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||||| ||||||||||| || | | ||||||||| ||||| ||||| ||
Sbjct 21088460 GATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATT 21088519
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | ||| | || || || || | || ||||| ||||| |||||||| |||||
Sbjct 21088520 GTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCAC 21088579
Query 34378 AAAGATCTGCATC-GCTCGAATG 34399
||||||||||||| || |||||
Sbjct 21088580 AAAGATCTGCATCTGCAAGAATG 21088602
Score = 118 bits (130), Expect = 7e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||| ||||| | || || ||||| |||||||||||||
Sbjct 3097263 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3097322
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| ||||| ||||| ||||||||||| |||
Sbjct 3097323 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3097382
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| ||||| ||| | | | | || | || | || || ||
Sbjct 3097383 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3097442
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|||| ||||||||| || || || || || ||||| ||||||||||||
Sbjct 3097443 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATC 3097490
Score = 114 bits (126), Expect = 8e-21
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||| || | | |||| |||| ||||||||| || |||
Sbjct 21087945 TCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAA 21088004
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| ||| | || ||||||||| ||||| ||| | | |
Sbjct 21088005 ATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 21088064
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| |||| || | || ||||| || | ||| ||||| ||||| || || || |||||
Sbjct 21088065 TCGATCGTGTCTGATGACTCGACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACG 21088124
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 21088125 AAGATCTGCAT 21088135
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | || || ||||| ||||||||||||| || ||| | ||
Sbjct 21087468 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCT 21087527
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || ||||||||||| ||| | | ||||| ||
Sbjct 21087528 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTATCC 21087587
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | | || | |||| || || |||| || |||||
Sbjct 21087588 TGGATCTTAGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTC 21087647
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| |||||||| || ||||||||||||||
Sbjct 21087648 TTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 21087679
Score = 96.9 bits (106), Expect = 2e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 18416504 CCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 18416563
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
||| ||| |||| |||| |||||| || ||||| |||||||||||||| ||
Sbjct 18416564 AGCGTGCGGCCGTCCTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGATC 18416616
>seq2
Length=36083738
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||| || | | | || |||| ||||||||| || ||
Sbjct 2262783 TCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAG 2262842
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| ||||||||||| ||| | || ||||||||| ||||| ||| | | |
Sbjct 2262843 ATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 2262902
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | || || || || | |||||||| |||||||| ||||| || ||
Sbjct 2262903 TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACG 2262962
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 2262963 AAGATCTGCAT 2262973
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || | | | || |||| ||||||||| || ||
Sbjct 2263011 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAG 2263070
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| ||||||||||| ||| | || ||||||||| ||||| ||| | || |
Sbjct 2263071 ATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 2263130
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | || || || || | ||||| || |||||||| | || ||||||
Sbjct 2263131 TCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCACA 2263190
Query 34379 AAGATCTGCATC 34390
||||||||||||
Sbjct 2263191 AAGATCTGCATC 2263202
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | || || ||||| ||||||||||||| ||| || | ||
Sbjct 2262217 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCC 2262276
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| ||||| || || ||||||||||| ||| | | |||||||||
Sbjct 2262277 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 2262336
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | |||| || || |||| ||||||||
Sbjct 2262337 TGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTC 2262396
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| || || | || ||||| |||||||||||
Sbjct 2262397 TTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428
Score = 98.7 bits (108), Expect = 6e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||| ||||| | || || ||||| ||||||||||| | || | | | ||
Sbjct 2262445 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCC 2262504
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| || || ||||| ||||||||||| ||| | || |||||||||
Sbjct 2262505 TCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 2262564
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | || || |||| ||||||||
Sbjct 2262565 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTC 2262624
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| ||||| || || ||||||||||||||
Sbjct 2262625 TTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2262656
>seq8
Length=23026653
Score = 104 bits (114), Expect = 2e-17
Identities = 140/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || || | || || | ||||||||| |||||
Sbjct 4124586 TCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAG 4124645
Query 34259 ATGAGCCGCT--GCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316
||||| |||| ||||||| || | || ||||||||| |||||| ||| | ||
Sbjct 4124646 ATGAGGCGCTCTGCTGGTCTGGGGAAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACAT 4124705
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | || | || | || || || || | ||||||| |||||||| ||||| ||||
Sbjct 4124706 TGTCGATGGTGTCTGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCA 4124765
Query 34377 CAAAGATCTGCATC 34390
||||||||||||||
Sbjct 4124766 CAAAGATCTGCATC 4124779
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | || || | || || | ||||||||| |||||
Sbjct 4139850 TCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCGGCGAAG 4139909
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||| ||||||||||| || | | ||||||||| ||||| ||| | || |
Sbjct 4139910 ATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTG 4139969
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | || || || || | ||||||| |||||||| || || ||||||
Sbjct 4139970 TCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCACA 4140029
Query 34379 AAGATCTGCATC 34390
||||||||||||
Sbjct 4140030 AAGATCTGCATC 4140041
Score = 82.4 bits (90), Expect = 5e-11
Identities = 107/148 (72%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 34243 CTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTAT 34302
||||||||| ||||| ||||| ||||||||||| || | | ||||||||| ||
Sbjct 4139031 CTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCTTGGAT 4139090
Query 34303 CTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCC 34362
||| ||| | | | | || | || | || || || || | ||||||| |||||
Sbjct 4139091 CTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCC 4139150
Query 34363 GGTGAGAGTTTTCACAAAGATCTGCATC 34390
||| || || ||||||||||||||||||
Sbjct 4139151 GGTTAGGGTCTTCACAAAGATCTGCATC 4139178
>seq3
Length=46202548
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 11348842 CCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCC 11348783
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
||| ||| | || |||| |||||| || ||||| ||||| |||||||||||
Sbjct 11348782 AGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTC 11348730
>seq10
Length=17164355
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||| ||||| | || || ||||| ||||||||||||| |
Sbjct 12574649 CCGCCGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 12574708
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
||| || |||| |||| |||||| || ||||| || ||||||||||||||
Sbjct 12574709 AGCGTCCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTC 12574761
>seq9
Length=22605696
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 15391468 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 15391409
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
|| ||| | || |||| |||||| || ||||| ||||| |||||||||||
Sbjct 15391408 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTC 15391356
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 15402875 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 15402816
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
|| ||| | || |||| |||||| || ||||| ||||| |||||||||||
Sbjct 15402815 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTC 15402763
Score = 82.4 bits (90), Expect = 5e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 13618164 CCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCC 13618223
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
|| ||| | || || | |||||| || ||||| ||||| |||||||||||
Sbjct 13618224 AGGGTGCGGCCATCCTCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTC 13618276
Score = 82.4 bits (90), Expect = 5e-11
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||||||||| | || || ||||| ||||||||||||| |
Sbjct 15397474 CCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 15397415
Query 34223 AGCTG-ACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
|| | ||| |||| |||| |||||| || ||||| || || |||||||||||
Sbjct 15397414 AGGGGTGCGGCCGTCATCCAGCTGCTTCCCGGCGAAGAT-AGGCGCTGCTGGTC 15397362
>seq7
Length=26479886
Score = 87.8 bits (96), Expect = 1e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|||||||| || | ||||| ||||| | || || ||||| ||||||||||||| |
Sbjct 22381831 CCGCCGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 22381772
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC 34275
||| || |||| |||| |||||| || ||||| || ||||||||||||||
Sbjct 22381771 AGCGTCCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTC 22381719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323033854081280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |