Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq6 174 1e-38
seq2 114 1e-20
seq5 104 2e-17
seq1 100 3e-16
seq4 87.8 2e-12
seq9 86.0 6e-12
>seq6
Length=30401905
Score = 174 bits (192), Expect = 1e-38
Identities = 472/711 (66%), Gaps = 11/711 (2%)
Strand=Plus/Minus
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
|||||| | || || ||||| || |||||||| || || |||||| | | | ||
Sbjct 1930106 CACGTGCTCGCCTTCTTCGCGGCCTCCGATGGCATCGTGCTCGAGAACCTCGCCTCCAGG 1930047
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| || ||||| || | |||||| | ||| ||||| || || | |||||
Sbjct 1930046 TTCATGTCCGACGTGCAGGTCGCCGAGGCGCGCGCCTTCTACGGGTTCCAGATCGCCATC 1929987
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866
|| ||| | || || || ||||| ||||| || |||| |||||| | ||| ||| |
Sbjct 1929986 GAGAACATCCACTCGGAGATGTACTCGCTGCTGCTCGAGACGTACATCCGCGACGACGTC 1929927
Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAGA 57925
||||| | || ||| ||| ||||| || | ||||| | |||| ||||| ||
Sbjct 1929926 GAGAAGGACCGCCTCTTCCGCGCCATCGACACCGTCCCCGCCGTGCGCCGC-AAGGCCGA 1929868
Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTT 57985
||| | || |||||| | ||| | | | ||||||||| |||| |||| ||
Sbjct 1929867 CTGGGCCATGCGATGGATCGACGGCGGCGAGCGC---TTCGCCGAGCGGCTCGTCGCCTT 1929811
Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGA 58044
|||| |||||| || || ||||| |||||| ||| |||| || | || ||| | ||||
Sbjct 1929810 CGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGCCA-TCTTCTGGCTCAAGA 1929752
Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTC 58104
| ||||| || ||||| ||||| || || ||||||| | || || ||||||||||| |
Sbjct 1929751 AGCGCGGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCC 1929692
Query 58105 TCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGACGCGGGAT 58163
|||| || || || ||||| | ||| | | | | || | ||||| || |
Sbjct 1929691 TCCACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACGAGGCA- 1929633
Query 58164 CGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCC 58223
||| || ||| || || |||| || || | ||||| | ||||| ||| ||| ||
Sbjct 1929632 CGCGTCCAGGAGATCGTCGCCGACGCCGTGGACATCGAGAGGGAGTTCGTCTGCGACGCG 1929573
Query 58224 CTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTT 58283
|| || || || | |||| |||||| || | ||| ||||||| ||||| ||
Sbjct 1929572 CTCCCCGTCGCGCTCGTCGGGATGAACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTC 1929513
Query 58284 GCCGACAGACTTTTGCTCGAACT-GATTGGAGAGCGTCATTACAACACGAAAAATCCGTT 58342
|||||| | || | | | || | || | || |||||| || |||||
Sbjct 1929512 GCCGACCGGCTGCTCATGGCGCTCGGGTGCA-AGAAGATGTACAACGTCGCCAACCCGTT 1929454
Query 58343 TGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393
|| | ||| | || ||||| || |||||||||| ||||| ||||| ||
Sbjct 1929453 CGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAA 1929403
Score = 140 bits (154), Expect = 3e-28
Identities = 401/607 (66%), Gaps = 10/607 (2%)
Strand=Plus/Plus
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATT-TGGTCGAAAG 57745
|||||| | || || |||||||| |||||||| || || |||||| | | | ||
Sbjct 11442416 CACGTGCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTGCTCGAGAAACCTCGCCTCCAG 11442475
Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805
|| || ||||| || | |||| | | ||| ||||| || || | |||||
Sbjct 11442476 GTTCATGTCCGACGTGCAGGTCGCCGAGGGGCGCGCCTTCTACGGGTTCCAGATCGCCAT 11442535
Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865
|| ||| | || || || ||||| ||||| || |||| || ||| | ||| ||
Sbjct 11442536 CGAGAACATCCACTCCGAGATGTACTCGCTGCTGCTCGAGACCTACATCCGCGACGGCGC 11442595
Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAG 57924
|||||| || |||||| ||| ||||| || | || || | |||| ||||| |
Sbjct 11442596 CGAGAAGGACAGGCTGTTCCGCGCCATCGACACCGTCCCGGCCGTGCGCCGC-AAGGCCG 11442654
Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGT 57984
| ||| | || ||||| | ||| | | | ||||||||| | || |||| |
Sbjct 11442655 ACTGGGCCATGCGCTGGATCGACGGCGGCGAGCGC---TTCGCCGAGCGCCTCGTCGCCT 11442711
Query 57985 TCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAG 58043
||||| |||||| || || ||||| |||||| ||| |||| || | || ||| | |||
Sbjct 11442712 TCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGCCA-TCTTCTGGCTCAAG 11442770
Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103
|| || || || ||||| ||||| || || ||||||| | || || |||||||||||
Sbjct 11442771 AAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGC 11442830
Query 58104 CTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGACGCGGGA 58162
|| || || || || ||||| | ||| | | | | || | ||||| ||
Sbjct 11442831 CTGCACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACG-AGGC 11442889
Query 58163 TCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGC 58222
||| || || || || |||| || |||| ||||| | ||||| ||| ||| ||
Sbjct 11442890 GCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACATCGAGAGGGAGTTCGTCTGCGACGC 11442949
Query 58223 CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGT 58282
|| || || || | |||| |||||| || | ||| ||||||| ||||| ||
Sbjct 11442950 GCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGT 11443009
Query 58283 TGCCGAC 58289
||||||
Sbjct 11443010 CGCCGAC 11443016
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| ||||||| || || ||||| |||| || || ||||
Sbjct 26902628 CATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTCGAGGTCGAGTCGTC 26902687
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | || || || || ||||||||| || | || || |||||
Sbjct 26902688 GGACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCTCCTGACCA 26902747
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || || || ||||| ||| | || ||| | ||| || ||||| ||
Sbjct 26902748 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGGACCCTGGCTGATTACAA 26902807
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||| ||||| || |||||||| || || ||||| |||||||| ||
Sbjct 26902808 CATTCAGAAAGAGTCCACTCTTCACCTTGTGCTTAGGCTGAGGGGAGG 26902855
Score = 98.7 bits (108), Expect = 9e-16
Identities = 156/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || || ||||| || |||||| |||| ||||| | ||
Sbjct 27218135 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 27218194
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 27218195 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 27218254
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||||||||| ||| | || || || || ||| || |||
Sbjct 27218255 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCCGACTACAAC 27218314
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGG 31416
|| || || || || || || || || || || || || |||||
Sbjct 27218315 ATCCAGAAGGAGTCCACCCTCCACCTTGTGCTCAGGCTCAGGGG 27218358
>seq2
Length=36083738
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||||||||| ||||| || |||||| | || || || | ||
Sbjct 2262974 CATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTGGAGTCTTC 2262915
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | ||||| | || ||||||||| ||| | || || |||||
Sbjct 2262914 TGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 2262855
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || |||||||| ||| |||| || | ||| | ||| || ||
Sbjct 2262854 GCAGCGCCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCCGACTACAA 2262795
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||| || || || || || |||||||| || || | || ||||| ||
Sbjct 2262794 CATCCAGAAGGAGTCCACCCTTCATCTTGTTCTGCGCCTAAGGGGTGG 2262747
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| |||| ||||| || |||||| |||| || || | ||
Sbjct 2263201 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCCTCT 2263142
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 2263141 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2263082
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || |||||||| ||| |||| ||
Sbjct 2263081 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGA 2263047
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || |||||||| || |||||| | || ||||| ||
Sbjct 2262656 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTTGAGAGCTCG 2262597
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 2262596 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2262537
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| || || || |||||||| ||| |||| ||
Sbjct 2262536 CAGCGCCTCATCTTTGCTGGCAAGCAGCTGGAGGA 2262502
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| |||| || || || ||||| | || ||||| |||
Sbjct 2262428 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 2262369
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || | || ||||||||| || | || || ||||||
Sbjct 2262368 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 2262309
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
|||||||| || ||||||||||| ||| |||| || | | | || || ||| || ||
Sbjct 2262308 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGA-TGGACGCACCCTGGCCGACTACAA 2262250
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || || || || ||||| ||
Sbjct 2262249 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 2262217
>seq5
Length=25164199
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || || || | || || || | ||
Sbjct 21088135 ATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACCATTACGCTTGAGGTCGAGTCATCA 21088076
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| || || ||||||||| ||| | || || ||||||
Sbjct 21088075 GACACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 21088016
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || |||||||| ||| |||| ||| | || | ||| || |||
Sbjct 21088015 CAGCGTCTTATTTTTGCTGGCAAGCAGCTGGAGGACGGCAGAACCCTCGCCGACTACAAC 21087956
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || || || || |||||||| || || | || ||||| ||
Sbjct 21087955 ATCCAGAAGGAGTCCACCCTTCATCTTGTTCTGCGCCTAAGGGGTGG 21087909
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| || || ||||| |||| ||||| || |||||| | || ||||| | ||
Sbjct 21088364 CATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTC 21088305
Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310
|| | | || |||| | | || ||| | ||||||||| || | || || ||||
Sbjct 21088304 TGATACCATTGACAACGTTAAGGCAAAGA-TCCAGGACAAGGAGGGGATTCCCCCGGACC 21088246
Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370
|||||||||| || || |||||||| ||| | || || || ||| | || || |
Sbjct 21088245 AGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACA 21088186
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||| || || || || || ||||| || || || | || ||||| ||
Sbjct 21088185 ACATCCAGAAGGAGTCCACCCTTCACCTTGTCCTCCGCCTCAGGGGAGG 21088137
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || |||||||| || ||||| || || || | || ||||| |||
Sbjct 21087679 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCC 21087620
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||| |||||||| | || || ||||||
Sbjct 21087619 GACACCATCGACAATGTGAAGGCTAAGATCCAGGATAAGGAAGGTATTCCCCCAGACCAG 21087560
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| ||| ||||||| || | ||| || |||
Sbjct 21087559 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCGCCGACTACAAC 21087500
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| || || || || || || ||||| || | || ||||| |||
Sbjct 21087499 ATTCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTTAGGGGTGGT 21087452
>seq1
Length=43445878
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| ||||| ||||| || || |||||||| | || || || |
Sbjct 9972024 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCC 9972083
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | || || || || ||||||||| || | |||||||||
Sbjct 9972084 TCGGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGAC 9972143
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || ||||| ||||| ||| |||| ||| || | ||| ||
Sbjct 9972144 CAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTAC 9972203
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || ||||| || || ||||| ||
Sbjct 9972204 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 9972238
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| ||||| ||||| || || |||||||| | || || || |
Sbjct 9981232 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCC 9981291
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| |||| | || || || || ||||||||| || | |||||||||
Sbjct 9981292 TCGGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGAC 9981351
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||||| || || ||||| ||||| ||| |||| ||| || | ||| ||
Sbjct 9981352 CAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTAC 9981411
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || ||||| || || ||||| ||
Sbjct 9981412 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 9981446
>seq4
Length=32292456
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | |||
Sbjct 28749989 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCC 28750048
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||| ||||| ||| | || || ||||||
Sbjct 28750049 GACACAATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 28750108
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
||||| || || ||||||||||| ||| | || |||
Sbjct 28750109 CAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGAC 28750144
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | |||
Sbjct 28750217 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCC 28750276
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||| ||||| ||| | || || ||||||
Sbjct 28750277 GACACAATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 28750336
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
||||| || || ||||||||||| ||| | || |||
Sbjct 28750337 CAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGAC 28750372
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| || || ||||| || || ||| | || || || ||||
Sbjct 28749532 CATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCGTC 28749591
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | || || | || ||||||||| || | || || |||||
Sbjct 28749592 TGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCA 28749651
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || || ||||| || ||| | || || || | || || ||
Sbjct 28749652 GCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAA 28749711
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||| ||||| ||||| || || || || || || | || |||||||||
Sbjct 28749712 CATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTA 28749761
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || || ||||| ||||||||| | || ||||| | ||
Sbjct 28749761 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCT 28749820
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||| ||||| ||| | || || ||||||
Sbjct 28749821 GACACGATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 28749880
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348
||||| || || ||||||||||| ||| | || |||
Sbjct 28749881 CAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGAC 28749916
>seq9
Length=22605696
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344
|||||||||||| | || || || || |||||| | |||||||| ||||| ||| ||||
Sbjct 12264340 GGACAAGGAAGGGATCCCTCCAGATCAACAGCGTTTGATATTCGCCGGCAAGCAGCTGGA 12264399
Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || ||| || |||||||| || || || |||||||| ||||| ||
Sbjct 12264400 AGATGGGCGCACACTGGCCGACTACAACATTCAGAAGGAGTCAACTCTTCACCTGGTCCT 12264459
Query 31405 TAGACTGAGGGGCGG 31419
|| || ||||| ||
Sbjct 12264460 CAGGCTAAGGGGTGG 12264474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445712417688960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |