Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 174 1e-38 seq2 114 1e-20 seq5 104 2e-17 seq1 100 3e-16 seq4 87.8 2e-12 seq9 86.0 6e-12 >seq6 Length=30401905 Score = 174 bits (192), Expect = 1e-38 Identities = 472/711 (66%), Gaps = 11/711 (2%) Strand=Plus/Minus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| | || || ||||| || |||||||| || || |||||| | | | || Sbjct 1930106 CACGTGCTCGCCTTCTTCGCGGCCTCCGATGGCATCGTGCTCGAGAACCTCGCCTCCAGG 1930047 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| || | |||||| | ||| ||||| || || | ||||| Sbjct 1930046 TTCATGTCCGACGTGCAGGTCGCCGAGGCGCGCGCCTTCTACGGGTTCCAGATCGCCATC 1929987 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || || || ||||| ||||| || |||| |||||| | ||| ||| | Sbjct 1929986 GAGAACATCCACTCGGAGATGTACTCGCTGCTGCTCGAGACGTACATCCGCGACGACGTC 1929927 Query 57867 GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAGA 57925 ||||| | || ||| ||| ||||| || | ||||| | |||| ||||| || Sbjct 1929926 GAGAAGGACCGCCTCTTCCGCGCCATCGACACCGTCCCCGCCGTGCGCCGC-AAGGCCGA 1929868 Query 57926 GTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTT 57985 ||| | || |||||| | ||| | | | ||||||||| |||| |||| || Sbjct 1929867 CTGGGCCATGCGATGGATCGACGGCGGCGAGCGC---TTCGCCGAGCGGCTCGTCGCCTT 1929811 Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGA 58044 |||| |||||| || || ||||| |||||| ||| |||| || | || ||| | |||| Sbjct 1929810 CGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGCCA-TCTTCTGGCTCAAGA 1929752 Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTC 58104 | ||||| || ||||| ||||| || || ||||||| | || || ||||||||||| | Sbjct 1929751 AGCGCGGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCC 1929692 Query 58105 TCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGACGCGGGAT 58163 |||| || || || ||||| | ||| | | | | || | ||||| || | Sbjct 1929691 TCCACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACGAGGCA- 1929633 Query 58164 CGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCC 58223 ||| || ||| || || |||| || || | ||||| | ||||| ||| ||| || Sbjct 1929632 CGCGTCCAGGAGATCGTCGCCGACGCCGTGGACATCGAGAGGGAGTTCGTCTGCGACGCG 1929573 Query 58224 CTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTT 58283 || || || || | |||| |||||| || | ||| ||||||| ||||| || Sbjct 1929572 CTCCCCGTCGCGCTCGTCGGGATGAACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTC 1929513 Query 58284 GCCGACAGACTTTTGCTCGAACT-GATTGGAGAGCGTCATTACAACACGAAAAATCCGTT 58342 |||||| | || | | | || | || | || |||||| || ||||| Sbjct 1929512 GCCGACCGGCTGCTCATGGCGCTCGGGTGCA-AGAAGATGTACAACGTCGCCAACCCGTT 1929454 Query 58343 TGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || | ||| | || ||||| || |||||||||| ||||| ||||| || Sbjct 1929453 CGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAA 1929403 Score = 140 bits (154), Expect = 3e-28 Identities = 401/607 (66%), Gaps = 10/607 (2%) Strand=Plus/Plus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATT-TGGTCGAAAG 57745 |||||| | || || |||||||| |||||||| || || |||||| | | | || Sbjct 11442416 CACGTGCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTGCTCGAGAAACCTCGCCTCCAG 11442475 Query 57746 ATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 || || ||||| || | |||| | | ||| ||||| || || | ||||| Sbjct 11442476 GTTCATGTCCGACGTGCAGGTCGCCGAGGGGCGCGCCTTCTACGGGTTCCAGATCGCCAT 11442535 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 || ||| | || || || ||||| ||||| || |||| || ||| | ||| || Sbjct 11442536 CGAGAACATCCACTCCGAGATGTACTCGCTGCTGCTCGAGACCTACATCCGCGACGGCGC 11442595 Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGAT-CGCCAAGAAGGCAG 57924 |||||| || |||||| ||| ||||| || | || || | |||| ||||| | Sbjct 11442596 CGAGAAGGACAGGCTGTTCCGCGCCATCGACACCGTCCCGGCCGTGCGCCGC-AAGGCCG 11442654 Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGT 57984 | ||| | || ||||| | ||| | | | ||||||||| | || |||| | Sbjct 11442655 ACTGGGCCATGCGCTGGATCGACGGCGGCGAGCGC---TTCGCCGAGCGCCTCGTCGCCT 11442711 Query 57985 TCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAG 58043 ||||| |||||| || || ||||| |||||| ||| |||| || | || ||| | ||| Sbjct 11442712 TCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGCCA-TCTTCTGGCTCAAG 11442770 Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 || || || || ||||| ||||| || || ||||||| | || || ||||||||||| Sbjct 11442771 AAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGC 11442830 Query 58104 CTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAAC-CGACGCGGGA 58162 || || || || || ||||| | ||| | | | | || | ||||| || Sbjct 11442831 CTGCACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACG-AGGC 11442889 Query 58163 TCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGC 58222 ||| || || || || |||| || |||| ||||| | ||||| ||| ||| || Sbjct 11442890 GCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACATCGAGAGGGAGTTCGTCTGCGACGC 11442949 Query 58223 CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGT 58282 || || || || | |||| |||||| || | ||| ||||||| ||||| || Sbjct 11442950 GCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGT 11443009 Query 58283 TGCCGAC 58289 |||||| Sbjct 11443010 CGCCGAC 11443016 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||||| || || ||||| |||| || || |||| Sbjct 26902628 CATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTCGAGGTCGAGTCGTC 26902687 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || || ||||||||| || | || || ||||| Sbjct 26902688 GGACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCTCCTGACCA 26902747 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || || ||||| ||| | || ||| | ||| || ||||| || Sbjct 26902748 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGGACCCTGGCTGATTACAA 26902807 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||| ||||| || |||||||| || || ||||| |||||||| || Sbjct 26902808 CATTCAGAAAGAGTCCACTCTTCACCTTGTGCTTAGGCTGAGGGGAGG 26902855 Score = 98.7 bits (108), Expect = 9e-16 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || |||||| |||| ||||| | || Sbjct 27218135 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 27218194 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| ||| | || || |||||| Sbjct 27218195 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 27218254 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || || || ||| || ||| Sbjct 27218255 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCCGACTACAAC 27218314 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGG 31416 || || || || || || || || || || || || || ||||| Sbjct 27218315 ATCCAGAAGGAGTCCACCCTCCACCTTGTGCTCAGGCTCAGGGG 27218358 >seq2 Length=36083738 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| || |||||| | || || || | || Sbjct 2262974 CATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTGGAGTCTTC 2262915 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 2262914 TGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCA 2262855 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || |||||||| ||| |||| || | ||| | ||| || || Sbjct 2262854 GCAGCGCCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCCGACTACAA 2262795 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || || || |||||||| || || | || ||||| || Sbjct 2262794 CATCCAGAAGGAGTCCACCCTTCATCTTGTTCTGCGCCTAAGGGGTGG 2262747 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| |||| ||||| || |||||| |||| || || | || Sbjct 2263201 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCCTCT 2263142 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 2263141 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2263082 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || || |||||||| ||| |||| || Sbjct 2263081 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGA 2263047 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || |||||||| || |||||| | || ||||| || Sbjct 2262656 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTTGAGAGCTCG 2262597 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 2262596 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2262537 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || || |||||||| ||| |||| || Sbjct 2262536 CAGCGCCTCATCTTTGCTGGCAAGCAGCTGGAGGA 2262502 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| || || || ||||| | || ||||| ||| Sbjct 2262428 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACTTTGGAGGTTGAGAGCTCC 2262369 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || ||||||||| || | || || |||||| Sbjct 2262368 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 2262309 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||||||||| ||| |||| || | | | || || ||| || || Sbjct 2262308 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGA-TGGACGCACCCTGGCCGACTACAA 2262250 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || || || ||||| || Sbjct 2262249 CATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 2262217 >seq5 Length=25164199 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || || || | || || || | || Sbjct 21088135 ATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACCATTACGCTTGAGGTCGAGTCATCA 21088076 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| ||| | || || |||||| Sbjct 21088075 GACACGATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 21088016 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| ||| |||| ||| | || | ||| || ||| Sbjct 21088015 CAGCGTCTTATTTTTGCTGGCAAGCAGCTGGAGGACGGCAGAACCCTCGCCGACTACAAC 21087956 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || |||||||| || || | || ||||| || Sbjct 21087955 ATCCAGAAGGAGTCCACCCTTCATCTTGTTCTGCGCCTAAGGGGTGG 21087909 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| |||| ||||| || |||||| | || ||||| | || Sbjct 21088364 CATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTC 21088305 Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 || | | || |||| | | || ||| | ||||||||| || | || || |||| Sbjct 21088304 TGATACCATTGACAACGTTAAGGCAAAGA-TCCAGGACAAGGAGGGGATTCCCCCGGACC 21088246 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 |||||||||| || || |||||||| ||| | || || || ||| | || || | Sbjct 21088245 AGCAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACA 21088186 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || || || || || ||||| || || || | || ||||| || Sbjct 21088185 ACATCCAGAAGGAGTCCACCCTTCACCTTGTCCTCCGCCTCAGGGGAGG 21088137 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || || || | || ||||| ||| Sbjct 21087679 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCC 21087620 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| |||||||| | || || |||||| Sbjct 21087619 GACACCATCGACAATGTGAAGGCTAAGATCCAGGATAAGGAAGGTATTCCCCCAGACCAG 21087560 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| ||||||| || | ||| || ||| Sbjct 21087559 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCGCCGACTACAAC 21087500 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| || || || || || || ||||| || | || ||||| ||| Sbjct 21087499 ATTCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTTAGGGGTGGT 21087452 >seq1 Length=43445878 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| || || |||||||| | || || || | Sbjct 9972024 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCC 9972083 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || || || ||||||||| || | ||||||||| Sbjct 9972084 TCGGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGAC 9972143 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| |||| ||| || | ||| || Sbjct 9972144 CAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTAC 9972203 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| || || ||||| || Sbjct 9972204 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 9972238 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| || || |||||||| | || || || | Sbjct 9981232 AAGATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCC 9981291 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| |||| | || || || || ||||||||| || | ||||||||| Sbjct 9981292 TCGGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGAC 9981351 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || ||||| ||||| ||| |||| ||| || | ||| || Sbjct 9981352 CAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTAC 9981411 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| || || ||||| || Sbjct 9981412 AACATCCAGAAGGAGTCGACCCTCCACCTGGTGCT 9981446 >seq4 Length=32292456 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | ||| Sbjct 28749989 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCC 28750048 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| ||||| ||| | || || |||||| Sbjct 28750049 GACACAATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 28750108 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| || || ||||||||||| ||| | || ||| Sbjct 28750109 CAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGAC 28750144 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | ||| Sbjct 28750217 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCC 28750276 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| ||||| ||| | || || |||||| Sbjct 28750277 GACACAATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 28750336 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| || || ||||||||||| ||| | || ||| Sbjct 28750337 CAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGAC 28750372 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| || || ||||| || || ||| | || || || |||| Sbjct 28749532 CATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCGTC 28749591 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || | || ||||||||| || | || || ||||| Sbjct 28749592 TGACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCA 28749651 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || ||||| || ||| | || || || | || || || Sbjct 28749652 GCAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAA 28749711 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||| ||||| || || || || || || | || ||||||||| Sbjct 28749712 CATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGGTA 28749761 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| ||||||||| | || ||||| | || Sbjct 28749761 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCT 28749820 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||| ||||| ||| | || || |||||| Sbjct 28749821 GACACGATCGACAATGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 28749880 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||| || || ||||||||||| ||| | || ||| Sbjct 28749881 CAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGAC 28749916 >seq9 Length=22605696 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 |||||||||||| | || || || || |||||| | |||||||| ||||| ||| |||| Sbjct 12264340 GGACAAGGAAGGGATCCCTCCAGATCAACAGCGTTTGATATTCGCCGGCAAGCAGCTGGA 12264399 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||| || |||||||| || || || |||||||| ||||| || Sbjct 12264400 AGATGGGCGCACACTGGCCGACTACAACATTCAGAAGGAGTCAACTCTTCACCTGGTCCT 12264459 Query 31405 TAGACTGAGGGGCGG 31419 || || ||||| || Sbjct 12264460 CAGGCTAAGGGGTGG 12264474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445712417688960