Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq10 641 5e-179 seq8 641 5e-179 seq7 641 5e-179 seq5 190 3e-43 seq6 114 2e-20 seq11 100 4e-16 >seq10 Length=17164355 Score = 641 bits (710), Expect = 5e-179 Identities = 719/956 (75%), Gaps = 4/956 (0%) Strand=Plus/Plus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 |||||| | ||| | || |||||||| ||||| || || | || ||||| || || Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425 Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491 ||||| ||||| ||| | | | || || |||| |||||| | || ||||||||||| | Sbjct 15960426 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 15960483 Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551 |||| || |||||||| || || || || |||||| |||||||| || | |||||||| | Sbjct 15960484 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 15960543 Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCA 135611 | || ||||||||||| |||| ||| || || ||||| | ||||| || || | Sbjct 15960544 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 15960603 Query 135612 TCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGG 135671 | ||||||||||| ||| ||||||||||| |||| ||||| ||||||||| | ||| | | Sbjct 15960604 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 15960663 Query 135672 TCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACC 135731 | | |||||| | | ||||| | ||| |||||||| ||||||||||| || || Sbjct 15960664 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 15960723 Query 135732 GACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTG 135791 | ||||||||||| ||||||||| ||| || || ||||| |||||||| |||||||| | Sbjct 15960724 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 15960783 Query 135792 CTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCA 135851 |||||||| || | ||||| |||| ||||| |||| |||||||||||| | || | Sbjct 15960784 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 15960843 Query 135852 TTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATC 135911 | ||||| ||||| |||| ||| |||| ||||||||||| || ||||| || ||||||| Sbjct 15960844 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 15960903 Query 135912 CTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATG 135971 | || |||||||| || || ||||| || ||||| ||||| || ||| ||||||||||| Sbjct 15960904 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 15960963 Query 135972 GATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATG 136031 | || | || ||||||||| | | | || || ||||| ||||| || | | Sbjct 15960964 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 15961023 Query 136032 GTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCG 136091 |||||| || |||||||| ||||||||||| || ||||| || ||||||||||| || | Sbjct 15961024 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 15961083 Query 136092 GTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTG 136151 | || | |||||||||||||| || |||||||||||||| ||||||| ||| | | Sbjct 15961084 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 15961143 Query 136152 CTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCA 136211 ||||||||||||| || || || ||||| |||| | || | ||| ||||| |||| Sbjct 15961144 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 15961203 Query 136212 ACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACA 136271 | || || |||||||| |||||||| || | || | ||||||| || | || | Sbjct 15961204 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 15961263 Query 136272 CCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 | ||||| ||| | | || |||||| ||| |||||||| || |||||||| ||| Sbjct 15961264 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGT 15961319 >seq8 Length=23026653 Score = 641 bits (710), Expect = 5e-179 Identities = 719/956 (75%), Gaps = 4/956 (0%) Strand=Plus/Plus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 |||||| | ||| | || |||||||| ||||| || || | || ||||| || || Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515 Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491 ||||| ||||| ||| | | | || || |||| |||||| | || ||||||||||| | Sbjct 17290516 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 17290573 Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551 |||| || |||||||| || || || || |||||| |||||||| || | |||||||| | Sbjct 17290574 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 17290633 Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCA 135611 | || ||||||||||| |||| ||| || || ||||| | ||||| || || | Sbjct 17290634 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 17290693 Query 135612 TCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGG 135671 | ||||||||||| ||| ||||||||||| |||| ||||| ||||||||| | ||| | | Sbjct 17290694 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 17290753 Query 135672 TCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACC 135731 | | |||||| | | ||||| | ||| |||||||| ||||||||||| || || Sbjct 17290754 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 17290813 Query 135732 GACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTG 135791 | ||||||||||| ||||||||| ||| || || ||||| |||||||| |||||||| | Sbjct 17290814 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 17290873 Query 135792 CTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCA 135851 |||||||| || | ||||| |||| ||||| |||| |||||||||||| | || | Sbjct 17290874 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 17290933 Query 135852 TTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATC 135911 | ||||| ||||| |||| ||| |||| ||||||||||| || ||||| || ||||||| Sbjct 17290934 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 17290993 Query 135912 CTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATG 135971 | || |||||||| || || ||||| || ||||| ||||| || ||| ||||||||||| Sbjct 17290994 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 17291053 Query 135972 GATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATG 136031 | || | || ||||||||| | | | || || ||||| ||||| || | | Sbjct 17291054 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 17291113 Query 136032 GTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCG 136091 |||||| || |||||||| ||||||||||| || ||||| || ||||||||||| || | Sbjct 17291114 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 17291173 Query 136092 GTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTG 136151 | || | |||||||||||||| || |||||||||||||| ||||||| ||| | | Sbjct 17291174 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 17291233 Query 136152 CTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCA 136211 ||||||||||||| || || || ||||| |||| | || | ||| ||||| |||| Sbjct 17291234 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 17291293 Query 136212 ACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACA 136271 | || || |||||||| |||||||| || | || | ||||||| || | || | Sbjct 17291294 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 17291353 Query 136272 CCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 | ||||| ||| | | || |||||| ||| |||||||| || |||||||| ||| Sbjct 17291354 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGT 17291409 Score = 594 bits (658), Expect = 6e-165 Identities = 737/1006 (73%), Gaps = 6/1006 (1%) Strand=Plus/Minus Query 137875 TGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGGTCTGGACTACTACTTT 137934 |||| |||||| | | | || || ||||| ||||| || |||||||| ||| | |||| Sbjct 17282599 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 17282540 Query 137935 TTCCCACTGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCACAACGTTTGTTACAAGCT 137994 |||| ||||||||| || | || || ||| |||| || ||||| ||||| || | Sbjct 17282539 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 17282480 Query 137995 GGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAATTTCCTCACAGCAGCTG 138054 |||| ||||| || |||||| | ||| | ||||| |||||| | || ||||| | Sbjct 17282479 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTAACCGCAGCAG 17282420 Query 138055 TTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 138114 |||| || ||||| || | | | || ||| | | ||||| ||||| || || | | Sbjct 17282419 TTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 17282360 Query 138115 AAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 138174 |||| ||| | || |||| ||| | || || || ||||||||||| || ||||| | Sbjct 17282359 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATG 17282300 Query 138175 GGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGATCTCTCG-TCTGGTAGGC 138233 |||| ||| || || || |||||| | || || ||||| | |||| |||| | | Sbjct 17282299 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTT---C 17282243 Query 138234 A--TCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGT 138291 | | || || || || ||||| |||||||||| || |||||||| || || ||| | Sbjct 17282242 AATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTAT 17282183 Query 138292 TCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAG 138351 ||||||| ||||| |||| |||||| ||||||||||||| || ||||| || |||| Sbjct 17282182 TCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAG 17282123 Query 138352 CAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCTTTC 138411 | || || |||||| | | ||| | || || || ||||| ||||| | ||||| |||| Sbjct 17282122 CGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTC 17282063 Query 138412 ATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTA 138471 |||||||||| || || || | | || | |||||||| || ||||||||||| || | Sbjct 17282062 ATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAA 17282003 Query 138472 CAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTGAAC 138531 | || ||||| ||| | | ||| || || || ||||||| || || ||| | | Sbjct 17282002 CCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACC 17281943 Query 138532 CTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAATCT 138591 | ||||||| |||||||| ||||||||||| || ||||| || | ||||| ||||||| Sbjct 17281942 CAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCT 17281883 Query 138592 TTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCGTCA 138651 |||| |||||||| ||||| |||||| | || ||||||||||| ||||| || |||| Sbjct 17281882 TTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCA 17281823 Query 138652 TGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGTATG 138711 ||| | |||| ||| |||||| | | || || ||||| |||||||| || |||| Sbjct 17281822 CCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATG 17281763 Query 138712 ATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACACCA 138771 | ||||| || || ||||| |||||||| |||||||||||||| ||||| |||||||||| Sbjct 17281762 ACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCA 17281703 Query 138772 AGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTCACG 138831 | || |||||| | || || ||| | ||||| |||||||| || |||||| ||||| | Sbjct 17281702 AAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATG 17281643 Query 138832 AAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 138877 |||| || | || ||||| || || | ||| | || |||||||| Sbjct 17281642 AAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597 Score = 143 bits (158), Expect = 3e-29 Identities = 121/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 136031 GGTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTC 136090 |||||||| || |||||||| ||||||||||| || ||| | || ||||||||||| || Sbjct 13113499 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTT 13113558 Query 136091 GGTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTT 136150 || || | |||||||||||||| || |||||||||||||| ||||||||||| | Sbjct 13113559 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTG 13113618 Query 136151 GCTGCTTGGCCTGTTGTCGGTATCTGGTT 136179 |||||||||| ||| || || || ||||| Sbjct 13113619 GCTGCTTGGCATGTAGTAGGGATTTGGTT 13113647 >seq7 Length=26479886 Score = 641 bits (710), Expect = 5e-179 Identities = 719/956 (75%), Gaps = 4/956 (0%) Strand=Plus/Plus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 |||||| | ||| | || |||||||| ||||| || || | || ||||| || || Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244 Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491 ||||| ||||| ||| | | | || || |||| |||||| | || ||||||||||| | Sbjct 22562245 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22562302 Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551 |||| || |||||||| || || || || |||||| |||||||| || | |||||||| | Sbjct 22562303 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 22562362 Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCA 135611 | || ||||||||||| |||| ||| || || ||||| | ||||| || || | Sbjct 22562363 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 22562422 Query 135612 TCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGG 135671 | ||||||||||| ||| ||||||||||| |||| ||||| ||||||||| | ||| | | Sbjct 22562423 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562482 Query 135672 TCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACC 135731 | | |||||| | | ||||| | ||| |||||||| ||||||||||| || || Sbjct 22562483 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 22562542 Query 135732 GACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTG 135791 | ||||||||||| ||||||||| ||| || || ||||| |||||||| |||||||| | Sbjct 22562543 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 22562602 Query 135792 CTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCA 135851 |||||||| || | ||||| |||| ||||| |||| |||||||||||| | || | Sbjct 22562603 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 22562662 Query 135852 TTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATC 135911 | ||||| ||||| |||| ||| |||| ||||||||||| || ||||| || ||||||| Sbjct 22562663 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 22562722 Query 135912 CTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATG 135971 | || |||||||| || || ||||| || ||||| ||||| || ||| ||||||||||| Sbjct 22562723 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 22562782 Query 135972 GATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATG 136031 | || | || ||||||||| | | | || || ||||| ||||| || | | Sbjct 22562783 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 22562842 Query 136032 GTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCG 136091 |||||| || |||||||| ||||||||||| || ||||| || ||||||||||| || | Sbjct 22562843 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 22562902 Query 136092 GTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTG 136151 | || | |||||||||||||| || |||||||||||||| ||||||| ||| | | Sbjct 22562903 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 22562962 Query 136152 CTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCA 136211 ||||||||||||| || || || ||||| |||| | || | ||| ||||| |||| Sbjct 22562963 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 22563022 Query 136212 ACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACA 136271 | || || |||||||| |||||||| || | || | ||||||| || | || | Sbjct 22563023 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 22563082 Query 136272 CCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 | ||||| ||| | | || |||||| ||| |||||||| || |||||||| ||| Sbjct 22563083 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGT 22563138 Score = 181 bits (200), Expect = 1e-40 Identities = 230/311 (74%), Gaps = 4/311 (1%) Strand=Plus/Plus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 |||||| | ||| | || |||||||| ||||| || || | || ||||| || || Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920 Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491 ||||| ||||| ||| | | | || || |||| |||||| | || ||||||||||| | Sbjct 22561921 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22561978 Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551 |||| || |||||||| | || || | | |||| |||||||| || | |||||||| | Sbjct 22561979 CTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACA 22562038 Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCA 135611 | || ||||||||||| |||| ||| || || ||||| | |||| || || | Sbjct 22562039 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAA 22562098 Query 135612 TCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGG 135671 | ||||||||||| ||| ||||||||||| |||| ||||| ||||||||| | ||| | | Sbjct 22562099 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562158 Query 135672 TCTTCCACTTC 135682 | | |||||| Sbjct 22562159 TTCTACACTTC 22562169 >seq5 Length=25164199 Score = 190 bits (210), Expect = 3e-43 Identities = 194/253 (77%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 138508 CAAATACTTTTAAAGCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTG 138567 ||||||| || || ||| | || ||||||| |||||||| |||||||| || || | Sbjct 21599136 CAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACCG 21599195 Query 138568 CTAACCGTTACTGGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACT 138627 |||| || | ||||| ||||||||||| |||||||| ||||| |||||| | || | Sbjct 21599196 CTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATT 21599255 Query 138628 TCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACTAGTAGTATTGGTATTATTGGTC 138687 |||||||||| ||||| || |||| ||| |||| |||| |||||| | | || | Sbjct 21599256 TCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGCC 21599315 Query 138688 TTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATC 138747 | ||||| |||||||| || ||||| ||||| || || |||| ||||||| ||||||| Sbjct 21599316 TGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGATC 21599375 Query 138748 CTGAATTCGAGAC 138760 ||||||| ||||| Sbjct 21599376 CTGAATTTGAGAC 21599388 >seq6 Length=30401905 Score = 114 bits (126), Expect = 2e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 138687 CTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGAT 138746 || ||||| ||| |||| | |||||| ||||| | ||||||| |||||||||||| || Sbjct 9625634 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAGAACAT 9625693 Query 138747 CCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGG 138806 |||||||| ||||| |||| |||||| || |||||| | || || || | ||||| ||| Sbjct 9625694 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 9625753 Query 138807 ATGGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGA 138866 ||| || ||||| ||| ||||| || | || ||||| || || | ||| | Sbjct 9625754 ATGATAACTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGT 9625813 Query 138867 GGCAAC 138872 || ||| Sbjct 9625814 GGAAAC 9625819 >seq11 Length=21200727 Score = 100 bits (110), Expect = 4e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 138748 CTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGA 138807 ||||||| ||||| ||||||||||| || |||||| | || || ||| | ||||| |||| Sbjct 11535663 CTGAATTGGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGA 11535604 Query 138808 TGGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAG 138867 |||| || |||||| ||||| ||||| || | || ||||| || || | ||| | | Sbjct 11535603 TGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTG 11535544 Query 138868 GCAACGCTCT 138877 | |||||||| Sbjct 11535543 GAAACGCTCT 11535534 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 138444 GCTCTGCTCTGTGCTATTCATGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAA 138503 |||||||| || ||||||||||| || || || ||||| ||| | | ||| || || || Sbjct 4414134 GCTCTGCTATGCGCTATTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGAT 4414075 Query 138504 CAATCAAATACTTTTAAAGCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTT 138563 ||||||| || || ||| | || ||||||| |||||||| ||||||||||| Sbjct 4414074 GGTGCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 4414015 Query 138564 ACTGCTAACCGTTACTGGTC 138583 || ||||| || | ||||| Sbjct 4414014 ACCGCTAATCGCTTTTGGTC 4413995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627891953075200