Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_006884.2
Length=178249
Score E
Sequences producing significant alignments: (Bits) Value
seq10 515 4e-141
seq8 515 4e-141
seq7 515 4e-141
seq5 82.4 9e-11
>seq10
Length=17164355
Score = 515 bits (570), Expect = 4e-141
Identities = 703/976 (72%), Gaps = 4/976 (0%)
Strand=Plus/Plus
Query 170675 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 170734
||| |||| ||| || || || | ||| | || ||||| ||||| || ||||||||
Sbjct 15960375 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC- 15960433
Query 170735 TGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGA 170793
| ||| | || || || || || ||| | || ||||||||||| |||||||| ||
Sbjct 15960434 TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGA 15960493
Query 170794 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 170853
||| || || || | || || ||| | |||||||| | || || ||||| || |||||
Sbjct 15960494 TATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTC 15960553
Query 170854 TGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGC 170913
|||||| | |||| |||| || || ||||| ||||| || || || ||||||||
Sbjct 15960554 TGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGC 15960613
Query 170914 AGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTT 170973
|| || | || |||||||| ||||| || |||||||| || || || || | |||||
Sbjct 15960614 TGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 15960673
Query 170974 CCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGACTAGGAAT 171033
| | |||| | || || |||||| | |||||||||| | | | || || ||
Sbjct 15960674 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTAT 15960733
Query 171034 GAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCT 171093
| | |||||||| ||| ||||| ||||| ||||| | || || || || ||| |
Sbjct 15960734 GCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTT 15960793
Query 171094 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 171153
| || || | ||||| || ||||||||||||||||| |||| || || |||||
Sbjct 15960794 GATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 15960853
Query 171154 GTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATAT 171213
|||||||| ||| | || ||||| ||||| || ||||| || ||||| || || || ||
Sbjct 15960854 TTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACAT 15960913
Query 171214 GGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGT 171273
| ||||||||| ||| | ||||| ||| || |||||||| ||||| ||||| | ||
Sbjct 15960914 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 15960973
Query 171274 GACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTT 171333
|| ||| | | ||||| || || ||||| ||||| | || | || || | ||
Sbjct 15960974 AACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATT 15961033
Query 171334 CGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAAT 171393
|| ||||| ||||| || ||||| ||||| || |||||||| || || || |||||||
Sbjct 15961034 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAAT 15961093
Query 171394 CTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCC 171453
|||||| ||||| || |||||||||||||| |||||||||||| | |||| | ||
Sbjct 15961094 CTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 15961153
Query 171454 TGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 171513
|||||| | | ||||| || || | ||||| |||| ||||| ||||| || |||||
Sbjct 15961154 TGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGG 15961213
Query 171514 ATTCAACTTCAACCAATCAGTTGTAGAT-GCAAACGGAAAGATTGTACCAACATGGGGAG 171572
|||||| ||||||||||| || || ||| || || || || | || |||| |
Sbjct 15961214 ATTCAATTTCAACCAATCTGTAGTTGATAGCCAA-GGTCGCGTTATTAATACTTGGGCTG 15961272
Query 171573 ATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACT 171632
|| | | ||| | || || ||||| |||||||| ||||| ||| | ||||| |||||||
Sbjct 15961273 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 15961332
Query 171633 TCCCACTAGACCTAGC 171648
|||| |||||||||||
Sbjct 15961333 TCCCTCTAGACCTAGC 15961348
>seq8
Length=23026653
Score = 515 bits (570), Expect = 4e-141
Identities = 703/976 (72%), Gaps = 4/976 (0%)
Strand=Plus/Plus
Query 170675 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 170734
||| |||| ||| || || || | ||| | || ||||| ||||| || ||||||||
Sbjct 17290465 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC- 17290523
Query 170735 TGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGA 170793
| ||| | || || || || || ||| | || ||||||||||| |||||||| ||
Sbjct 17290524 TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGA 17290583
Query 170794 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 170853
||| || || || | || || ||| | |||||||| | || || ||||| || |||||
Sbjct 17290584 TATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTC 17290643
Query 170854 TGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGC 170913
|||||| | |||| |||| || || ||||| ||||| || || || ||||||||
Sbjct 17290644 TGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGC 17290703
Query 170914 AGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTT 170973
|| || | || |||||||| ||||| || |||||||| || || || || | |||||
Sbjct 17290704 TGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 17290763
Query 170974 CCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGACTAGGAAT 171033
| | |||| | || || |||||| | |||||||||| | | | || || ||
Sbjct 17290764 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTAT 17290823
Query 171034 GAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCT 171093
| | |||||||| ||| ||||| ||||| ||||| | || || || || ||| |
Sbjct 17290824 GCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTT 17290883
Query 171094 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 171153
| || || | ||||| || ||||||||||||||||| |||| || || |||||
Sbjct 17290884 GATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 17290943
Query 171154 GTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATAT 171213
|||||||| ||| | || ||||| ||||| || ||||| || ||||| || || || ||
Sbjct 17290944 TTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACAT 17291003
Query 171214 GGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGT 171273
| ||||||||| ||| | ||||| ||| || |||||||| ||||| ||||| | ||
Sbjct 17291004 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 17291063
Query 171274 GACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTT 171333
|| ||| | | ||||| || || ||||| ||||| | || | || || | ||
Sbjct 17291064 AACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATT 17291123
Query 171334 CGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAAT 171393
|| ||||| ||||| || ||||| ||||| || |||||||| || || || |||||||
Sbjct 17291124 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAAT 17291183
Query 171394 CTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCC 171453
|||||| ||||| || |||||||||||||| |||||||||||| | |||| | ||
Sbjct 17291184 CTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 17291243
Query 171454 TGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 171513
|||||| | | ||||| || || | ||||| |||| ||||| ||||| || |||||
Sbjct 17291244 TGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGG 17291303
Query 171514 ATTCAACTTCAACCAATCAGTTGTAGAT-GCAAACGGAAAGATTGTACCAACATGGGGAG 171572
|||||| ||||||||||| || || ||| || || || || | || |||| |
Sbjct 17291304 ATTCAATTTCAACCAATCTGTAGTTGATAGCCAA-GGTCGCGTTATTAATACTTGGGCTG 17291362
Query 171573 ATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACT 171632
|| | | ||| | || || ||||| |||||||| ||||| ||| | ||||| |||||||
Sbjct 17291363 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 17291422
Query 171633 TCCCACTAGACCTAGC 171648
|||| |||||||||||
Sbjct 17291423 TCCCTCTAGACCTAGC 17291438
Score = 340 bits (376), Expect = 2e-88
Identities = 696/1038 (67%), Gaps = 21/1038 (2%)
Strand=Plus/Minus
Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854
||||| || | || || |||||| || || ||||| || || | |||||||||||
Sbjct 17282609 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17282550
Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914
|| || ||||| ||||||||||| | || | ||||||||||| ||| || |||||
Sbjct 17282549 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17282490
Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974
|| || || ||||| || ||||| | || || ||| | || || || || |||
Sbjct 17282489 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTA 17282430
Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034
|| |||||||| || || |||| || | | | || | | ||| | ||||||||
Sbjct 17282429 ACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 17282370
Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094
|| || |||||||| ||| || || |||| |||||||||||| || |||| |||||
Sbjct 17282369 CCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 17282310
Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154
|| | ||||| | |||| ||| |||||||||||| | | || ||||| |||| |
Sbjct 17282309 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGG 17282250
Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACG 172214
|||| | || ||||| || ||| | ||||||| | || || || ||
Sbjct 17282249 TCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTT 17282190
Query 172215 AGCATCTTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGT 172274
| | || || || |||||| | || || |||||||||| || || |||||
Sbjct 17282189 TCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGC 17282130
Query 172275 GTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAAT 172334
|| ||||| || ||||| | || | ||| | || || || || ||| || | ||
Sbjct 17282129 GTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAAC 17282070
Query 172335 CCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACAT 172394
||||||||||||||||| || || || || | || | || | ||||| || || |||
Sbjct 17282069 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 17282010
Query 172395 GGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATT 172454
|| ||||| || | ||||| | | ||| | || ||| |||
Sbjct 17282009 GGGGCAACCGTGGAAAACACTCTATTTGAGG------------ACGGTGATGGT------ 17281968
Query 172455 CAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATT 172514
| | || ||| | || || | || || || | |||||||||||| ||| |
Sbjct 17281967 ---GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTC 17281911
Query 172515 ACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTA 172574
|| ||||| | || ||||| || || |||||| | || ||||| || ||| | | |||
Sbjct 17281910 ACCGCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTA 17281851
Query 172575 CACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTA 172634
|| ||| ||||| | || ||||| |||| ||| | |||| |||| || | ||
Sbjct 17281850 CATTTCTTTATGCTATTTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTC 17281791
Query 172635 GGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAA 172694
|| || || || ||||| | || || ||||| || || || || || | ||||| |||
Sbjct 17281790 GGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAA 17281731
Query 172695 GACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCA 172754
|| || || ||||| || |||||||| || || |||||| | || || ||||| | ||
Sbjct 17281730 GATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCG 17281671
Query 172755 TGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCA 172814
|||||| || || ||||| || ||||| || || | ||||| || || || | |||
Sbjct 17281670 TGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCA 17281611
Query 172815 CGAGGCAACGCACTATAA 172832
|| || ||||| || |||
Sbjct 17281610 CGTGGAAACGCTCTTTAA 17281593
Score = 111 bits (122), Expect = 2e-19
Identities = 152/211 (72%), Gaps = 1/211 (0%)
Strand=Plus/Plus
Query 171268 TCTAGTGAC-ATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCT 171326
||| | ||| |||| | | ||||| || || ||||| ||||| | || | || |
Sbjct 13113443 TCTGGAGACTATCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTT 13113502
Query 171327 ATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTA 171386
| || || || ||||| ||||| || ||||| ||| | || |||||||| || || ||
Sbjct 13113503 ACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTTGGCC 13113562
Query 171387 GATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTG 171446
||||||||||||| ||||| || |||||||||||||| |||||||| ||| | ||||
Sbjct 13113563 GATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTGGCTG 13113622
Query 171447 TATTCCCTGTAGTCTGTGTATGGTTAACCTC 171477
| | |||||| | | ||||| | |||
Sbjct 13113623 CTTGGCATGTAGTAGGGATTTGGTTCATCTC 13113653
>seq7
Length=26479886
Score = 515 bits (570), Expect = 4e-141
Identities = 703/976 (72%), Gaps = 4/976 (0%)
Strand=Plus/Plus
Query 170675 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 170734
||| |||| ||| || || || | ||| | || ||||| ||||| || ||||||||
Sbjct 22562194 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC- 22562252
Query 170735 TGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGA 170793
| ||| | || || || || || ||| | || ||||||||||| |||||||| ||
Sbjct 22562253 TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGA 22562312
Query 170794 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 170853
||| || || || | || || ||| | |||||||| | || || ||||| || |||||
Sbjct 22562313 TATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTC 22562372
Query 170854 TGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGC 170913
|||||| | |||| |||| || || ||||| ||||| || || || ||||||||
Sbjct 22562373 TGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGC 22562432
Query 170914 AGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTT 170973
|| || | || |||||||| ||||| || |||||||| || || || || | |||||
Sbjct 22562433 TGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 22562492
Query 170974 CCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAGACTAGGAAT 171033
| | |||| | || || |||||| | |||||||||| | | | || || ||
Sbjct 22562493 CTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTAT 22562552
Query 171034 GAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGCAGTATTCCT 171093
| | |||||||| ||| ||||| ||||| ||||| | || || || || ||| |
Sbjct 22562553 GCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTT 22562612
Query 171094 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 171153
| || || | ||||| || ||||||||||||||||| |||| || || |||||
Sbjct 22562613 GATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTAC 22562672
Query 171154 GTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCCCTTCCATAT 171213
|||||||| ||| | || ||||| ||||| || ||||| || ||||| || || || ||
Sbjct 22562673 TTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACAT 22562732
Query 171214 GGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGGTTCTCTAGT 171273
| ||||||||| ||| | ||||| ||| || |||||||| ||||| ||||| | ||
Sbjct 22562733 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 22562792
Query 171274 GACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGGCTATAAGTT 171333
|| ||| | | ||||| || || ||||| ||||| | || | || || | ||
Sbjct 22562793 AACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATT 22562852
Query 171334 CGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAAT 171393
|| ||||| ||||| || ||||| ||||| || |||||||| || || || |||||||
Sbjct 22562853 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAAT 22562912
Query 171394 CTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCCC 171453
|||||| ||||| || |||||||||||||| |||||||||||| | |||| | ||
Sbjct 22562913 CTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 22562972
Query 171454 TGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 171513
|||||| | | ||||| || || | ||||| |||| ||||| ||||| || |||||
Sbjct 22562973 TGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGG 22563032
Query 171514 ATTCAACTTCAACCAATCAGTTGTAGAT-GCAAACGGAAAGATTGTACCAACATGGGGAG 171572
|||||| ||||||||||| || || ||| || || || || | || |||| |
Sbjct 22563033 ATTCAATTTCAACCAATCTGTAGTTGATAGCCAA-GGTCGCGTTATTAATACTTGGGCTG 22563091
Query 171573 ATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACACAACT 171632
|| | | ||| | || || ||||| |||||||| ||||| ||| | ||||| |||||||
Sbjct 22563092 ATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 22563151
Query 171633 TCCCACTAGACCTAGC 171648
|||| |||||||||||
Sbjct 22563152 TCCCTCTAGACCTAGC 22563167
Score = 134 bits (148), Expect = 2e-26
Identities = 212/301 (70%), Gaps = 2/301 (1%)
Strand=Plus/Plus
Query 170675 TGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTAATGATCCCA 170734
||| |||| ||| || || || | ||| | || ||||| ||||| || ||||||||
Sbjct 22561870 TGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCC- 22561928
Query 170735 TGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCCTCCAGTCGA 170793
| ||| | || || || || || ||| | || ||||||||||| |||||||| ||
Sbjct 22561929 TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGA 22561988
Query 170794 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 170853
||| || | || | | | ||| | |||||||| | || || ||||| || |||||
Sbjct 22561989 TATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTC 22562048
Query 170854 TGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCATCTGGGAAGC 170913
|||||| | |||| |||| || || ||||| |||| || || || ||||||||
Sbjct 22562049 TGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAATTTGGGAAGC 22562108
Query 170914 AGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTATTTTCCACTT 170973
|| || | || |||||||| ||||| || |||||||| || || || || | |||||
Sbjct 22562109 TGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTT 22562168
Query 170974 C 170974
|
Sbjct 22562169 C 22562169
>seq5
Length=25164199
Score = 82.4 bits (90), Expect = 9e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 172494 GAAGAAACTTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCA 172553
|||||||||||| || | || ||||| | || ||||| || || |||||| | ||
Sbjct 21599171 GAAGAAACTTATTCAATAGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCT 21599230
Query 172554 TTTTCAAACAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGG 172613
||||| || ||| | | ||||| ||| ||||| | || ||||| |||| ||| |||
Sbjct 21599231 TTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACCGGTTAATGG 21599290
Query 172614 ACATCATCTATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCT 172673
| |||| || | || || || || || ||||| | || || ||||| || ||
Sbjct 21599291 ATGAGTACTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCC 21599350
Query 172674 CAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAAC 172711
|| | || | |||| ||||| || || ||||| ||
Sbjct 21599351 CAGAAAATCCGTGCAGTGGAAGATCCTGAATTTGAGAC 21599388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570199740448320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |