Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=25164199 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| ||||||||||| || ||||| || || || |||||| | || ||| | Sbjct 21087908 AATGCAGATTTTTGTCAAGACACTCACTGGCAAGACTATTACCCTTGAGGTTGAGAGCTC 21087849 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| | || || || || ||||| || ||| ||||| || || Sbjct 21087848 GGACACCATTGATAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCA 21087789 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| ||||| || | ||| ||||| || | || |||| | ||| | || || || || Sbjct 21087788 GCAGAGACTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACAA 21087729 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTG 115495 |||||| || |||||||| |||| ||||| Sbjct 21087728 CATTCAGAAGGAGTCTACCCTACACTTGGTG 21087698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425293778570560