Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq10 600 1e-166 seq8 600 1e-166 seq7 600 1e-166 seq5 156 5e-33 seq3 132 5e-26 >seq10 Length=17164355 Score = 600 bits (664), Expect = 1e-166 Identities = 730/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Plus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 ||||||| | ||| | || ||| | ||||||||||| | || ||||| || | Sbjct 15960365 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 15960424 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | ||||| ||||| || || |||| ||| | || || | Sbjct 15960425 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 15960483 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || |||||||| || | || ||| || | || || |||| Sbjct 15960484 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 15960543 Query 166232 ACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCA 166291 | || ||||||||||| || | || | || || || || | ||||| || || | Sbjct 15960544 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 15960603 Query 166292 TCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAG 166351 | |||||||| ||||| ||||||| ||| | || || || ||||||| |||| | | Sbjct 15960604 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 15960663 Query 166352 TCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACC 166411 | | |||||| | | || | | || ||||||||||| |||||| || || || Sbjct 15960664 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 15960723 Query 166412 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCG 166471 | || |||||||||||||||||| || ||||| || || ||||||||||| || ||| Sbjct 15960724 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 15960783 Query 166472 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTA 166531 | || ||| || | || ||| | |||||||| ||||||||| | ||||| | || | Sbjct 15960784 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 15960843 Query 166532 TCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACC 166591 | ||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| | Sbjct 15960844 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 15960903 Query 166592 CCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACG 166651 | || || ||| | |||||||| ||||||||||| || || || ||| || ||||| | Sbjct 15960904 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 15960963 Query 166652 GCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTAT 166710 | | || || || | | | | || | || |||||||||| || ||| || | Sbjct 15960964 GTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 15961022 Query 166711 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTC 166770 ||||||| ||||||||||| |||||||| || || || ||||| ||||||||||| || Sbjct 15961023 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 15961082 Query 166771 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTC 166830 || || | ||||||||||| ||| || ||||||||||| || | ||||||||| | Sbjct 15961083 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 15961142 Query 166831 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTC 166890 || || |||||||| || || || ||||| |||||| | ||| |||| || ||||| ||| Sbjct 15961143 GCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 15961202 Query 166891 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 166950 || || ||||| ||||| |||||||| || | | ||| | || ||||| || | || Sbjct 15961203 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 15961262 Query 166951 ACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAAT 167010 |||||||| ||| || ||||||||||| ||| |||||||||||||||||||| |||||| Sbjct 15961263 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 15961322 Query 167011 GCTCACAACTTCCCTCTGGATCTTGCTGCT 167040 ||||||||||||||||| || || |||||| Sbjct 15961323 GCTCACAACTTCCCTCTAGACCTAGCTGCT 15961352 >seq8 Length=23026653 Score = 600 bits (664), Expect = 1e-166 Identities = 730/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Plus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 ||||||| | ||| | || ||| | ||||||||||| | || ||||| || | Sbjct 17290455 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 17290514 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | ||||| ||||| || || |||| ||| | || || | Sbjct 17290515 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 17290573 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || |||||||| || | || ||| || | || || |||| Sbjct 17290574 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 17290633 Query 166232 ACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCA 166291 | || ||||||||||| || | || | || || || || | ||||| || || | Sbjct 17290634 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 17290693 Query 166292 TCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAG 166351 | |||||||| ||||| ||||||| ||| | || || || ||||||| |||| | | Sbjct 17290694 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 17290753 Query 166352 TCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACC 166411 | | |||||| | | || | | || ||||||||||| |||||| || || || Sbjct 17290754 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 17290813 Query 166412 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCG 166471 | || |||||||||||||||||| || ||||| || || ||||||||||| || ||| Sbjct 17290814 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 17290873 Query 166472 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTA 166531 | || ||| || | || ||| | |||||||| ||||||||| | ||||| | || | Sbjct 17290874 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 17290933 Query 166532 TCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACC 166591 | ||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| | Sbjct 17290934 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 17290993 Query 166592 CCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACG 166651 | || || ||| | |||||||| ||||||||||| || || || ||| || ||||| | Sbjct 17290994 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 17291053 Query 166652 GCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTAT 166710 | | || || || | | | | || | || |||||||||| || ||| || | Sbjct 17291054 GTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 17291112 Query 166711 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTC 166770 ||||||| ||||||||||| |||||||| || || || ||||| ||||||||||| || Sbjct 17291113 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 17291172 Query 166771 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTC 166830 || || | ||||||||||| ||| || ||||||||||| || | ||||||||| | Sbjct 17291173 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 17291232 Query 166831 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTC 166890 || || |||||||| || || || ||||| |||||| | ||| |||| || ||||| ||| Sbjct 17291233 GCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 17291292 Query 166891 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 166950 || || ||||| ||||| |||||||| || | | ||| | || ||||| || | || Sbjct 17291293 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 17291352 Query 166951 ACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAAT 167010 |||||||| ||| || ||||||||||| ||| |||||||||||||||||||| |||||| Sbjct 17291353 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 17291412 Query 167011 GCTCACAACTTCCCTCTGGATCTTGCTGCT 167040 ||||||||||||||||| || || |||||| Sbjct 17291413 GCTCACAACTTCCCTCTAGACCTAGCTGCT 17291442 Score = 529 bits (586), Expect = 2e-145 Identities = 730/1017 (72%), Gaps = 8/1017 (1%) Strand=Plus/Minus Query 167300 TTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 167359 |||||| | |||| |||||| | | | ||||| ||||| ||||| || |||||||| Sbjct 17282609 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17282550 Query 167360 TTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 167419 || | |||||||| ||||||| | || | || || ||| |||| || || || ||| Sbjct 17282549 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17282490 Query 167420 GTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACC--TTG--AGGGTGCTAATTT 167475 || || ||||||||||| || |||||| |||| | ||| ||| ||| ||||| Sbjct 17282489 GTAACTTCTTGGTATACCCATGGATTGGCG---AGTTCCTATTTGGAAGGTTGC-AATTT 17282434 Query 167476 TCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTG 167535 | || |||||||| || || ||||| | | | | || ||| | | ||||| || Sbjct 17282433 CTTAACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATG 17282374 Query 167536 GGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTT 167595 ||| || || | || |||||||| | | ||||| || | || || || ||| |||| Sbjct 17282373 GGGCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTT 17282314 Query 167596 TGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAG 167655 ||| || ||||| || || ||||| || ||||| || ||| | || |||||||| | Sbjct 17282313 TGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 17282254 Query 167656 TAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTT 167715 | | || | || ||||| ||||| ||| | || ||||| || || ||||| || Sbjct 17282253 TCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTT 17282194 Query 167716 TGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTT 167775 ||| || || || || || ||||| || || || ||| ||||||||||||| ||| || Sbjct 17282193 TGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTT 17282134 Query 167776 TGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCT 167835 ||| || |||||||||||| ||||| | || ||| | || || || ||||| |||||| | Sbjct 17282133 TGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTT 17282074 Query 167836 CAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAAT 167895 ||||| || ||||||||||||||||| || | |||||| || |||| | || || Sbjct 17282073 GAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTAT 17282014 Query 167896 CCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTTCAA 167955 ||||| | || || || || ||||| | ||| || ||||| ||||| || ||| Sbjct 17282013 TCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCG 17281954 Query 167956 AGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTG 168015 || ||| | | ||||| | || ||||||||||| |||||||| ||||| || || || Sbjct 17281953 CGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTG 17281894 Query 168016 GTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTT 168075 ||| ||||| |||||| ||||||| |||||| |||||||| || ||||||||||| || Sbjct 17281893 GTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATT 17281834 Query 168076 CGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCT 168135 || || |||| || | |||| ||| ||||||| | |||| || || || || || Sbjct 17281833 TGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCT 17281774 Query 168136 TCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAAC 168195 ||||| |||||||| || || |||||| | | ||||| || ||||| || ||||| || Sbjct 17281773 ACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 17281714 Query 168196 TTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGA 168255 |||||| || ||||| || || | || || || | ||||| |||||||| | || Sbjct 17281713 TTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGA 17281654 Query 168256 CCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312 || || |||||||| || ||||||| || || || | ||| | || |||||||| Sbjct 17281653 TCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597 Score = 129 bits (142), Expect = 7e-25 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740 || |||||||||| || ||| || | |||||||| ||||||||||| |||||||| Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528 Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 166800 || || || |||| ||||||||||| || || || | ||||||||||| ||| || Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588 Query 166801 AACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 166859 ||||||||||| || | ||||| ||| | || || |||| ||| || || || ||||| Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGTT 13113647 Score = 82.4 bits (90), Expect = 9e-11 Identities = 118/165 (72%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 167696 TCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGT 167755 ||||| | |||| || |||| | || || || || ||||| || ||||| |||||| Sbjct 3892088 TCTGGCTCAATTGTCGTTCTTGTTTTCGTATTCCTGATTTATCCACTAGGACAATCCAGT 3892147 Query 167756 TGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAG 167815 | |||||||| | | |||| ||||||||||| |||| | ||||| || || Sbjct 3892148 TAGTTCTTTGTGCTGAGTTTTGTCACATCAGCGATATTTCAATTCATCCTATT-CTCCAA 3892206 Query 167816 GGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTT 167860 || || ||||| | ||| | ||||| || ||||| ||||||||| Sbjct 3892207 GGATTTCATAATTTAACGTTGAACCCATTTCATATAATGGGAGTT 3892251 >seq7 Length=26479886 Score = 600 bits (664), Expect = 1e-166 Identities = 730/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Plus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 ||||||| | ||| | || ||| | ||||||||||| | || ||||| || | Sbjct 22562184 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22562243 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | ||||| ||||| || || |||| ||| | || || | Sbjct 22562244 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22562302 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| ||||| || |||||||| || | || ||| || | || || |||| Sbjct 22562303 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 22562362 Query 166232 ACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCA 166291 | || ||||||||||| || | || | || || || || | ||||| || || | Sbjct 22562363 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 22562422 Query 166292 TCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAG 166351 | |||||||| ||||| ||||||| ||| | || || || ||||||| |||| | | Sbjct 22562423 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562482 Query 166352 TCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACC 166411 | | |||||| | | || | | || ||||||||||| |||||| || || || Sbjct 22562483 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 22562542 Query 166412 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCG 166471 | || |||||||||||||||||| || ||||| || || ||||||||||| || ||| Sbjct 22562543 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 22562602 Query 166472 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTA 166531 | || ||| || | || ||| | |||||||| ||||||||| | ||||| | || | Sbjct 22562603 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 22562662 Query 166532 TCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACC 166591 | ||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| | Sbjct 22562663 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 22562722 Query 166592 CCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACG 166651 | || || ||| | |||||||| ||||||||||| || || || ||| || ||||| | Sbjct 22562723 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 22562782 Query 166652 GCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTAT 166710 | | || || || | | | | || | || |||||||||| || ||| || | Sbjct 22562783 GTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 22562841 Query 166711 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTC 166770 ||||||| ||||||||||| |||||||| || || || ||||| ||||||||||| || Sbjct 22562842 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 22562901 Query 166771 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTC 166830 || || | ||||||||||| ||| || ||||||||||| || | ||||||||| | Sbjct 22562902 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 22562961 Query 166831 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTC 166890 || || |||||||| || || || ||||| |||||| | ||| |||| || ||||| ||| Sbjct 22562962 GCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 22563021 Query 166891 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 166950 || || ||||| ||||| |||||||| || | | ||| | || ||||| || | || Sbjct 22563022 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 22563081 Query 166951 ACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAAT 167010 |||||||| ||| || ||||||||||| ||| |||||||||||||||||||| |||||| Sbjct 22563082 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 22563141 Query 167011 GCTCACAACTTCCCTCTGGATCTTGCTGCT 167040 ||||||||||||||||| || || |||||| Sbjct 22563142 GCTCACAACTTCCCTCTAGACCTAGCTGCT 22563171 Score = 116 bits (128), Expect = 4e-21 Identities = 214/311 (69%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112 ||||||| | ||| | || ||| | ||||||||||| | || ||||| || | Sbjct 22561860 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22561919 Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171 |||||| || || | ||| | |||| | ||||| || || |||| ||| | || || | Sbjct 22561920 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATCGCTGCCC 22561978 Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231 |||| || ||||| |||| || |||| || || | || ||| || | || || |||| Sbjct 22561979 CTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACA 22562038 Query 166232 ACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCA 166291 | || ||||||||||| || | || | || || || || | |||| || || | Sbjct 22562039 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAA 22562098 Query 166292 TCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAG 166351 | |||||||| ||||| ||||||| ||| | || || || ||||||| |||| | | Sbjct 22562099 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562158 Query 166352 TCTTCCACTTC 166362 | | |||||| Sbjct 22562159 TTCTACACTTC 22562169 >seq5 Length=25164199 Score = 156 bits (172), Expect = 5e-33 Identities = 187/254 (74%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 167942 GCAAACACTTTCAAAGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACT 168001 ||||| || ||| || ||| | | ||||| | || ||||||||||| || ||||| Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194 Query 168002 GCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCAC 168061 ||||| || || ||||| ||||| |||||| ||||||| |||||| |||||||| || Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254 Query 168062 TTCTTTATGCTTTTCGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGT 168121 ||||||||||| || || || |||| || |||| ||| ||||||| | |||| Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314 Query 168122 CTCGCACTTAATCTTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGAT 168181 || || || || || ||||| |||||||| || || ||| || | | |||| || ||| Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374 Query 168182 CCAGAGTTTGAAAC 168195 || || ||||| || Sbjct 21599375 CCTGAATTTGAGAC 21599388 >seq3 Length=46202548 Score = 132 bits (146), Expect = 5e-26 Identities = 131/168 (78%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 166852 ATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 166911 || ||||| |||||| | ||| |||| || ||||| ||||| || ||||| ||||| ||| Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739 Query 166912 AACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGATGTCCTCAAC 166971 ||||| || | | ||| | || ||||| || | | |||||||| ||| || ||||| Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680 Query 166972 CGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAAC 167019 ||||| ||| | |||||||||||||||||| |||||||||||| || Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567163308204800