Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq6 143 5e-29
seq73 93.3 9e-14
seq12 93.3 9e-14
seq11 93.3 9e-14
seq10 93.3 9e-14
seq9 93.3 9e-14
seq5 93.3 9e-14
seq3 93.3 9e-14
seq1 93.3 9e-14
seq1127 91.5 3e-13
seq2 91.5 3e-13
seq8 87.8 4e-12
>seq6
Length=30401905
Score = 143 bits (158), Expect = 5e-29
Identities = 551/853 (65%), Gaps = 22/853 (3%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||||| ||| ||||| |||||||| ||||||| ||||| | |
Sbjct 1929406 TCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGCTCCATCCAGTCGAACGGGTTGGCG 1929465
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| |||||| ||| || || || | || | ||||| || || ||||| |
Sbjct 1929466 ACGTTGTACATCTTCTTGCACCCGAGCGCCATGAGCAGCCGGTCGGCGACGAACTCGATG 1929525
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAGAT 251741
||||| | ||| || || |||||| || | | |||| ||| || || ||||
Sbjct 1929526 TACTGGCTCATGAGCTCGCCGTTCATCCCGACGAGCGCGACGGGGAGC-GCGTCGCAGAC 1929584
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801
||| ||| | ||| || | || || || | || || ||| || ||||| ||
Sbjct 1929585 GAACTCCCTCTCGATGTCCACGGCGTCGGCGACGATCTCCTGGACGCGTGCCTCGTCGAG 1929644
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
|||| || ||| ||||| | | || | ||| || |||||||||||
Sbjct 1929645 CTTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCGTCGCG 1929704
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
||||| ||||||||| | ||||| ||||| | || || ||| ||||||||||
Sbjct 1929705 GGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTTCTTGAGCCAGAA 1929764
Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981
||| ||||| ||||| || ||||| | | |||||||| || | | || || || ||
Sbjct 1929765 GATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAGGCGACGAGCCG 1929824
Query 251982 CTCAGCAAACGACTTGTCCTGCGACAA--GAACTTCTGTGCCCATGCTGCCTTCTTTCCA 252039
||| || || || | || || | | | | || ||||| | ||||| |
Sbjct 1929825 CTCGGCGAAGCGCTCG-CCGCCGTCGATCCATCGCATG-GCCCAGTCGGCCTTGCGGCGC 1929882
Query 252040 ACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGATG 252099
|| ||||||| || ||||| || ||||| || | |||| | ||||| ||||
Sbjct 1929883 ACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCGACGTCGTCGCGGATG 1929942
Query 252100 AGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTAA 252159
|| || ||||| || |||||||||||||| |||||| ||| || |||||| |
Sbjct 1929943 TACGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAC 1930002
Query 252160 GCATAGAATAGACGCGCGGAAGGGTCGGTGACTT--CCGT-GGA---AAAGTTGTTTGCA 252213
| |||| || ||||| | |||| ||| | ||| ||| || || ||
Sbjct 1930003 CCGTAGA--AGGCGCGC----GCCTCGGCGACCTGCACGTCGGACATGAACCTGGAGGCG 1930056
Query 252214 ATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAG 252273
| |||||| | ||| ||||||||| | | || |||||| | || | | || ||||
Sbjct 1930057 AGGTTCTCGAGCACGATGCCATCGGAGGCCGCGAAGAAGGCGAGCACGTGGGAGACGAAG 1930116
Query 252274 TGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGG--AA 252331
|| ||||| ||| ||| | | ||||| | ||| | ||||| |
Sbjct 1930117 TGGCGCTCGTCGGGCGACAGCGCGGCGTCCCAGTGGCGCGCGTC--GGCGGAGAGGTCCA 1930174
Query 252332 CTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGGT 252391
| || ||| |||||||||| | | ||||||||||||||| | | | | | ||||
Sbjct 1930175 CCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGT 1930234
Query 252392 ACTTGATTGGGAA 252404
|| |||| |||||
Sbjct 1930235 ACCTGATCGGGAA 1930247
Score = 141 bits (156), Expect = 2e-28
Identities = 400/608 (66%), Gaps = 6/608 (1%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||||| ||| ||||| |||||||| ||||||||||||| | |
Sbjct 11443117 TCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGCTCCATCCAGTCGAAGGGGTTGGCG 11443058
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| |||||| ||| ||| || || | || || |||||| || || ||||| |
Sbjct 11443057 ACGTTGTACATCTTCTTGCAGCCGAGCGCCATGAGGAGGCGGTCGGCGACGAACTCGATG 11442998
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAGAT 251741
||||| | ||| || || ||||||||| | | |||| ||| || || ||||
Sbjct 11442997 TACTGGCTCATGAGGTCGCCGTTCATGCCGACGAGCGCGACGGGGAGC-GCGTCGCAGAC 11442939
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801
||| ||| | ||| || | || || || | || || | || | ||| ||
Sbjct 11442938 GAACTCCCTCTCGATGTCGACGGCGTCGGCGACGATCTCGCGGACGCGCGCCTCGTCGAG 11442879
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
|||| || ||| ||||| | | || | |||||| |||||||||||
Sbjct 11442878 CTTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGCGAAGTCGCAGTGCAGGCCCTCGTCGCG 11442819
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
||||| ||||||||| | ||||| ||||| | ||| || ||| ||||||||||
Sbjct 11442818 GGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTCTTGAGCCAGAA 11442759
Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981
||| ||||| ||||| || ||||| | | |||||||| || | | || || |||||
Sbjct 11442758 GATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAGGCGACGAGGCG 11442699
Query 251982 CTCAGCAAACGACTTGTCCTGCGACAA--GAACTTCTGTGCCCATGCTGCCTTCTTTCCA 252039
||| || || || | || || | | | | || ||||| | ||||| |
Sbjct 11442698 CTCGGCGAAGCGCTCG-CCGCCGTCGATCCAGCGCATG-GCCCAGTCGGCCTTGCGGCGC 11442641
Query 252040 ACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGATG 252099
|| || |||| || ||||| || || || || | |||||| |||| ||||
Sbjct 11442640 ACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCTGTCCTTCTCGGCGCCGTCGCGGATG 11442581
Query 252100 AGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTAA 252159
| || ||||| || ||||||||||| || |||||| ||| || |||||| |
Sbjct 11442580 TAGGTCTCGAGCAGCAGCGAGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAC 11442521
Query 252160 GCATAGAA 252167
| |||||
Sbjct 11442520 CCGTAGAA 11442513
>seq73
Length=17659
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 16192 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 16133
Query 142563 CCCCAC 142568
||||||
Sbjct 16132 CCCCAC 16127
>seq12
Length=18681871
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 15819775 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 15819834
Query 142563 CCCCAC 142568
||||||
Sbjct 15819835 CCCCAC 15819840
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 16304253 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16304194
Query 142564 CCCAC 142568
|||||
Sbjct 16304193 CCCAC 16304189
>seq11
Length=21200727
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 21057914 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 21057855
Query 142563 CCCCAC 142568
||||||
Sbjct 21057854 CCCCAC 21057849
>seq10
Length=17164355
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 13499077 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 13499018
Query 142563 CCCCAC 142568
||||||
Sbjct 13499017 CCCCAC 13499012
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 14956583 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 14956524
Query 142563 CCCCAC 142568
||||||
Sbjct 14956523 CCCCAC 14956518
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 14956182 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 14956123
Query 142563 CCCCA 142567
|||||
Sbjct 14956122 CCCCA 14956118
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||| ||||||||||
Sbjct 14956415 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTCGAG 14956356
Query 142563 CCCCAC 142568
||||||
Sbjct 14956355 CCCCAC 14956350
>seq9
Length=22605696
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 3105764 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3105823
Query 142563 CCCCAC 142568
||||||
Sbjct 3105824 CCCCAC 3105829
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 8378425 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8378484
Query 142564 CCCAC 142568
|||||
Sbjct 8378485 CCCAC 8378489
>seq5
Length=25164199
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 22122194 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 22122253
Query 142563 CCCCAC 142568
||||||
Sbjct 22122254 CCCCAC 22122259
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 7893112 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 7893053
Query 142564 CCCAC 142568
|||||
Sbjct 7893052 CCCAC 7893048
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 16935550 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16935609
Query 142564 CCCAC 142568
|||||
Sbjct 16935610 CCCAC 16935614
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 18545964 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 18545905
Query 142564 CCCAC 142568
|||||
Sbjct 18545904 CCCAC 18545900
>seq3
Length=46202548
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 24182745 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 24182804
Query 142563 CCCCAC 142568
||||||
Sbjct 24182805 CCCCAC 24182810
>seq1
Length=43445878
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 10893881 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 10893940
Query 142563 CCCCAC 142568
||||||
Sbjct 10893941 CCCCAC 10893946
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 26600998 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 26600939
Query 142563 CCCCAC 142568
||||||
Sbjct 26600938 CCCCAC 26600933
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 27457646 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 27457587
Query 142563 CCCCAC 142568
||||||
Sbjct 27457586 CCCCAC 27457581
Score = 91.5 bits (100), Expect = 3e-13
Identities = 61/68 (90%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||
Sbjct 38921338 ATTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 38921279
Query 142561 AGCCCCAC 142568
||||||||
Sbjct 38921278 AGCCCCAC 38921271
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 33974317 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 33974258
Query 142563 CCCCAC 142568
|||||
Sbjct 33974257 GCCCAC 33974252
>seq1127
Length=558
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 308 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 249
Query 142564 CCCAC 142568
|||||
Sbjct 248 CCCAC 244
>seq2
Length=36083738
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 17505630 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 17505689
Query 142564 CCCAC 142568
|||||
Sbjct 17505690 CCCAC 17505694
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 17509966 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 17510025
Query 142564 CCCAC 142568
|||||
Sbjct 17510026 CCCAC 17510030
Score = 86.0 bits (94), Expect = 1e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716
|||| || |||||||| ||||||||||| ||| || | ||||| || ||||||||||
Sbjct 28687712 AGGTGGCACAGTTTTCCGGTTATGTATCAGAACACTCAGCGTACCACCATGGTGAGCAGA 28687653
Query 218717 GTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACT 218776
|| | || | ||| || ||||| || || | ||| ||||| || ||||| |||
Sbjct 28687652 GTTTAGCTAGTACTATTACTGGAATGGCTCAAGATTTTGTTGGCAGCAATAACATAAACC 28687593
Query 218777 TGCTGCTCCCCAACGGTCAGTTTGG 218801
| ||| ||||| ||||| |||||
Sbjct 28687592 TCTTGCAGCCCAATGGTCAATTTGG 28687568
>seq8
Length=23026653
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||
Sbjct 3877357 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3877416
Query 142563 CCCCAC 142568
||||||
Sbjct 3877417 CCCCAC 3877422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027709217187608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |