Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6 143 5e-29 seq73 93.3 9e-14 seq12 93.3 9e-14 seq11 93.3 9e-14 seq10 93.3 9e-14 seq9 93.3 9e-14 seq5 93.3 9e-14 seq3 93.3 9e-14 seq1 93.3 9e-14 seq1127 91.5 3e-13 seq2 91.5 3e-13 seq8 87.8 4e-12 >seq6 Length=30401905 Score = 143 bits (158), Expect = 5e-29 Identities = 551/853 (65%), Gaps = 22/853 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| |||||||| ||||||| ||||| | | Sbjct 1929406 TCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGCTCCATCCAGTCGAACGGGTTGGCG 1929465 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| ||| || || || | || | ||||| || || ||||| | Sbjct 1929466 ACGTTGTACATCTTCTTGCACCCGAGCGCCATGAGCAGCCGGTCGGCGACGAACTCGATG 1929525 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAGAT 251741 ||||| | ||| || || |||||| || | | |||| ||| || || |||| Sbjct 1929526 TACTGGCTCATGAGCTCGCCGTTCATCCCGACGAGCGCGACGGGGAGC-GCGTCGCAGAC 1929584 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801 ||| ||| | ||| || | || || || | || || ||| || ||||| || Sbjct 1929585 GAACTCCCTCTCGATGTCCACGGCGTCGGCGACGATCTCCTGGACGCGTGCCTCGTCGAG 1929644 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 |||| || ||| ||||| | | || | ||| || ||||||||||| Sbjct 1929645 CTTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGCGAAGTCGCAGTGGAGGCCCTCGTCGCG 1929704 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 ||||| ||||||||| | ||||| ||||| | || || ||| |||||||||| Sbjct 1929705 GGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTTCTTGAGCCAGAA 1929764 Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981 ||| ||||| ||||| || ||||| | | |||||||| || | | || || || || Sbjct 1929765 GATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAGGCGACGAGCCG 1929824 Query 251982 CTCAGCAAACGACTTGTCCTGCGACAA--GAACTTCTGTGCCCATGCTGCCTTCTTTCCA 252039 ||| || || || | || || | | | | || ||||| | ||||| | Sbjct 1929825 CTCGGCGAAGCGCTCG-CCGCCGTCGATCCATCGCATG-GCCCAGTCGGCCTTGCGGCGC 1929882 Query 252040 ACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGATG 252099 || ||||||| || ||||| || ||||| || | |||| | ||||| |||| Sbjct 1929883 ACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCGACGTCGTCGCGGATG 1929942 Query 252100 AGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTAA 252159 || || ||||| || |||||||||||||| |||||| ||| || |||||| | Sbjct 1929943 TACGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCGATGGCGATCTGGAAC 1930002 Query 252160 GCATAGAATAGACGCGCGGAAGGGTCGGTGACTT--CCGT-GGA---AAAGTTGTTTGCA 252213 | |||| || ||||| | |||| ||| | ||| ||| || || || Sbjct 1930003 CCGTAGA--AGGCGCGC----GCCTCGGCGACCTGCACGTCGGACATGAACCTGGAGGCG 1930056 Query 252214 ATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAG 252273 | |||||| | ||| ||||||||| | | || |||||| | || | | || |||| Sbjct 1930057 AGGTTCTCGAGCACGATGCCATCGGAGGCCGCGAAGAAGGCGAGCACGTGGGAGACGAAG 1930116 Query 252274 TGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGG--AA 252331 || ||||| ||| ||| | | ||||| | ||| | ||||| | Sbjct 1930117 TGGCGCTCGTCGGGCGACAGCGCGGCGTCCCAGTGGCGCGCGTC--GGCGGAGAGGTCCA 1930174 Query 252332 CTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGGT 252391 | || ||| |||||||||| | | ||||||||||||||| | | | | | |||| Sbjct 1930175 CCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGT 1930234 Query 252392 ACTTGATTGGGAA 252404 || |||| ||||| Sbjct 1930235 ACCTGATCGGGAA 1930247 Score = 141 bits (156), Expect = 2e-28 Identities = 400/608 (66%), Gaps = 6/608 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| |||||||| ||||||||||||| | | Sbjct 11443117 TCGAAGAAGTTGGTCTTGCCCTGCAGGGAGATGAGCTCCATCCAGTCGAAGGGGTTGGCG 11443058 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | |||||| ||| ||| || || | || || |||||| || || ||||| | Sbjct 11443057 ACGTTGTACATCTTCTTGCAGCCGAGCGCCATGAGGAGGCGGTCGGCGACGAACTCGATG 11442998 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATA-CGACAAGGAATTGCCTCACAGAT 251741 ||||| | ||| || || ||||||||| | | |||| ||| || || |||| Sbjct 11442997 TACTGGCTCATGAGGTCGCCGTTCATGCCGACGAGCGCGACGGGGAGC-GCGTCGCAGAC 11442939 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801 ||| ||| | ||| || | || || || | || || | || | ||| || Sbjct 11442938 GAACTCCCTCTCGATGTCGACGGCGTCGGCGACGATCTCGCGGACGCGCGCCTCGTCGAG 11442879 Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861 |||| || ||| ||||| | | || | |||||| ||||||||||| Sbjct 11442878 CTTGCCGCGGAGGAGGTCGTAGAGGAGGCAGGCGAAGTCGCAGTGCAGGCCCTCGTCGCG 11442819 Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921 ||||| ||||||||| | ||||| ||||| | ||| || ||| |||||||||| Sbjct 11442818 GGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTCTTGAGCCAGAA 11442759 Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981 ||| ||||| ||||| || ||||| | | |||||||| || | | || || ||||| Sbjct 11442758 GATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAGGCGACGAGGCG 11442699 Query 251982 CTCAGCAAACGACTTGTCCTGCGACAA--GAACTTCTGTGCCCATGCTGCCTTCTTTCCA 252039 ||| || || || | || || | | | | || ||||| | ||||| | Sbjct 11442698 CTCGGCGAAGCGCTCG-CCGCCGTCGATCCAGCGCATG-GCCCAGTCGGCCTTGCGGCGC 11442641 Query 252040 ACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGATG 252099 || || |||| || ||||| || || || || | |||||| |||| |||| Sbjct 11442640 ACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCTGTCCTTCTCGGCGCCGTCGCGGATG 11442581 Query 252100 AGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTAA 252159 | || ||||| || ||||||||||| || |||||| ||| || |||||| | Sbjct 11442580 TAGGTCTCGAGCAGCAGCGAGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAC 11442521 Query 252160 GCATAGAA 252167 | ||||| Sbjct 11442520 CCGTAGAA 11442513 >seq73 Length=17659 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 16192 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 16133 Query 142563 CCCCAC 142568 |||||| Sbjct 16132 CCCCAC 16127 >seq12 Length=18681871 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 15819775 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 15819834 Query 142563 CCCCAC 142568 |||||| Sbjct 15819835 CCCCAC 15819840 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 16304253 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16304194 Query 142564 CCCAC 142568 ||||| Sbjct 16304193 CCCAC 16304189 >seq11 Length=21200727 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 21057914 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 21057855 Query 142563 CCCCAC 142568 |||||| Sbjct 21057854 CCCCAC 21057849 >seq10 Length=17164355 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 13499077 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 13499018 Query 142563 CCCCAC 142568 |||||| Sbjct 13499017 CCCCAC 13499012 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 14956583 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 14956524 Query 142563 CCCCAC 142568 |||||| Sbjct 14956523 CCCCAC 14956518 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 14956182 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 14956123 Query 142563 CCCCA 142567 ||||| Sbjct 14956122 CCCCA 14956118 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || |||||| |||||||||| Sbjct 14956415 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTCGAG 14956356 Query 142563 CCCCAC 142568 |||||| Sbjct 14956355 CCCCAC 14956350 >seq9 Length=22605696 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 3105764 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3105823 Query 142563 CCCCAC 142568 |||||| Sbjct 3105824 CCCCAC 3105829 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 8378425 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8378484 Query 142564 CCCAC 142568 ||||| Sbjct 8378485 CCCAC 8378489 >seq5 Length=25164199 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 22122194 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 22122253 Query 142563 CCCCAC 142568 |||||| Sbjct 22122254 CCCCAC 22122259 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 7893112 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 7893053 Query 142564 CCCAC 142568 ||||| Sbjct 7893052 CCCAC 7893048 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 16935550 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16935609 Query 142564 CCCAC 142568 ||||| Sbjct 16935610 CCCAC 16935614 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 18545964 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 18545905 Query 142564 CCCAC 142568 ||||| Sbjct 18545904 CCCAC 18545900 >seq3 Length=46202548 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 24182745 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 24182804 Query 142563 CCCCAC 142568 |||||| Sbjct 24182805 CCCCAC 24182810 >seq1 Length=43445878 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 10893881 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 10893940 Query 142563 CCCCAC 142568 |||||| Sbjct 10893941 CCCCAC 10893946 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 26600998 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 26600939 Query 142563 CCCCAC 142568 |||||| Sbjct 26600938 CCCCAC 26600933 Score = 93.3 bits (102), Expect = 9e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 27457646 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 27457587 Query 142563 CCCCAC 142568 |||||| Sbjct 27457586 CCCCAC 27457581 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || ||||| |||||||||||||||||||| || ||||||| || ||||||||||||||| Sbjct 38921338 ATTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 38921279 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 38921278 AGCCCCAC 38921271 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||| Sbjct 33974317 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 33974258 Query 142563 CCCCAC 142568 ||||| Sbjct 33974257 GCCCAC 33974252 >seq1127 Length=558 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 308 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 249 Query 142564 CCCAC 142568 ||||| Sbjct 248 CCCAC 244 >seq2 Length=36083738 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 17505630 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 17505689 Query 142564 CCCAC 142568 ||||| Sbjct 17505690 CCCAC 17505694 Score = 91.5 bits (100), Expect = 3e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||| Sbjct 17509966 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 17510025 Query 142564 CCCAC 142568 ||||| Sbjct 17510026 CCCAC 17510030 Score = 86.0 bits (94), Expect = 1e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 218657 AGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGA 218716 |||| || |||||||| ||||||||||| ||| || | ||||| || |||||||||| Sbjct 28687712 AGGTGGCACAGTTTTCCGGTTATGTATCAGAACACTCAGCGTACCACCATGGTGAGCAGA 28687653 Query 218717 GTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACT 218776 || | || | ||| || ||||| || || | ||| ||||| || ||||| ||| Sbjct 28687652 GTTTAGCTAGTACTATTACTGGAATGGCTCAAGATTTTGTTGGCAGCAATAACATAAACC 28687593 Query 218777 TGCTGCTCCCCAACGGTCAGTTTGG 218801 | ||| ||||| ||||| ||||| Sbjct 28687592 TCTTGCAGCCCAATGGTCAATTTGG 28687568 >seq8 Length=23026653 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 3877357 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3877416 Query 142563 CCCCAC 142568 |||||| Sbjct 3877417 CCCCAC 3877422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027709217187608