Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 143 6e-29
seq1 140 8e-28
seq4 122 2e-22
seq2 122 2e-22
seq8 109 1e-18
seq6 102 2e-16
seq9 95.1 3e-14
>seq5
Length=25164199
Score = 143 bits (158), Expect = 6e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| |||||||| | || ||||| || | ||| || || ||||| || |||||||||
Sbjct 3097263 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3097322
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || |||||||| || ||||| || |||
Sbjct 3097323 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3097382
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || |||||||| || || |||||||| || || | || || || ||
Sbjct 3097383 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3097442
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| |||||||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct 3097443 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 3097489
Score = 118 bits (130), Expect = 3e-21
Identities = 146/197 (74%), Gaps = 12/197 (6%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||||||||| ||||| || ||||| | || || || ||||||
Sbjct 21087489 TCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAG 21087548
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| ||||| || |||||| || ||||| ||||||||||| || || |||||
Sbjct 21087549 ATCAGGCGCTGCTG---GTCTGGGGGAATACCTTCCTTATCCTGGATCTTAGCCTTCACA 21087605
Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || | || |||| || || || || || || ||||| || || ||||||
Sbjct 21087606 TTGTCGATGGTGTCGGAGCTC---TCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTC 21087662
Query 288457 TTGACGAATATCTGCAT 288473
||||| || ||||||||
Sbjct 21087663 TTGACAAAGATCTGCAT 21087679
Score = 113 bits (124), Expect = 1e-19
Identities = 165/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | || | || || ||||||| ||| || || ||||| || ||||||||
Sbjct 21087908 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 21087967
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || | ||||| || | || || || || || || |||||||| || |||||
Sbjct 21087968 GAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGCTG---GTCTGG 21088024
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| || || || || |||||||| ||||| || ||||| || || | || || ||
Sbjct 21088025 GGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGATGACTC 21088084
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| || ||||| || ||||| || || || ||||| ||||| |||||||||
Sbjct 21088085 GACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCATT 21088136
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/198 (71%), Gaps = 12/198 (6%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || ||||| || || ||||| || || || | || || || || |||
Sbjct 21087717 TCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 21087776
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || | ||| || |||||| || || || ||||||||||| ||||| ||||||
Sbjct 21087777 ATGAGTCTCTGCTGG---TCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACG 21087833
Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || | || |||| || || || || || || ||||| || || || |||
Sbjct 21087834 TTATCAATGGTGTCCGAGCTC---TCAACCTCAAGGGTAATAGTCTTGCCAGTGAGTGTC 21087890
Query 288457 TTGACGAATATCTGCATT 288474
||||| || |||||||||
Sbjct 21087891 TTGACAAAAATCTGCATT 21087908
Score = 93.3 bits (102), Expect = 1e-13
Identities = 160/231 (69%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| || | ||| | || || || |||| ||| || || ||||| || ||||| ||
Sbjct 21088136 TCCTCCCCTGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 21088195
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || | || || || | || || || || |||||||||||||| || || ||
Sbjct 21088196 AAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTG---GTCCGG 21088252
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| || || || || |||||||| || || || ||||| || || | ||| || ||
Sbjct 21088253 GGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTC 21088312
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || |||| |||||||| || || |||||
Sbjct 21088313 AACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 21088363
>seq1
Length=43445878
Score = 140 bits (154), Expect = 8e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| |||||||| | || || || || | || || || ||||| || |||||||||
Sbjct 9972253 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9972194
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || |||||||| || ||||| || |||
Sbjct 9972193 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9972134
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| ||||| |||||||| || || | || || || ||
Sbjct 9972133 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9972074
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct 9972073 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9972027
Score = 140 bits (154), Expect = 8e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| |||||||| | || || || || | || || || ||||| || |||||||||
Sbjct 9981461 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9981402
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || || || |||||||| || ||||| || |||
Sbjct 9981401 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9981342
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| ||||| |||||||| || || | || || || ||
Sbjct 9981341 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9981282
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct 9981281 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9981235
>seq4
Length=32292456
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| |||||||| || || ||||| ||||| || | || || || ||||||
Sbjct 28750179 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 28750120
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || ||||| || ||||| ||| || || ||||||||||| || || |||||
Sbjct 28750119 ATGAGCCGCTGCTGG---TCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 28750063
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| || || || || || ||||| ||||| ||||| || |||||
Sbjct 28750062 TTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 28750003
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 28750002 ACGAAGATCTGCAT 28749989
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| |||||||| || || ||||| ||||| || | || || || ||||||
Sbjct 28750407 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 28750348
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || ||||| || ||||| ||| || || ||||||||||| || || |||||
Sbjct 28750347 ATGAGCCGCTGCTGG---TCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 28750291
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | ||| || || || || || ||||| ||||| ||||| || |||||
Sbjct 28750290 TTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 28750231
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 28750230 ACGAAGATCTGCAT 28750217
Score = 107 bits (118), Expect = 5e-18
Identities = 141/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| |||||||| || || ||||| ||||| || | || || || ||||||
Sbjct 28749951 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 28749892
Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || ||||| || ||||| ||| || || ||||||||||| || || |||||
Sbjct 28749891 ATGAGCCGCTGCTGG---TCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 28749835
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | || || || || || | ||||||||||| || || || |||||
Sbjct 28749834 TTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTC 28749775
Query 288460 ACGAATATCTGCAT 288473
|| || ||||||||
Sbjct 28749774 ACAAAGATCTGCAT 28749761
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| ||||| || ||||| || || || || || | || || || ||||||
Sbjct 28749495 TCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAG 28749436
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || ||||| || ||||| || || |||||||| || || || ||||| ||
Sbjct 28749435 ATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTG 28749376
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | |||| || || || || | ||||| ||||| || || || ||||| |||
Sbjct 28749375 TCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACG 28749316
Query 288463 AATATCTGCAT 288473
|||||||||||
Sbjct 28749315 AATATCTGCAT 28749305
Score = 87.8 bits (96), Expect = 4e-12
Identities = 156/230 (68%), Gaps = 21/230 (9%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | ||| || || ||||| || ||||||||
Sbjct 28750656 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCA 28750597
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365
|| ||||| || || || || ||| || ||||| || |||||
Sbjct 28750596 AGGGTGCGGCCATCCTCNAA---------------GATGAGCCGCTGCTGG---TCTGGA 28750555
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||| || || ||||||||||| || || ||||| || || || | ||| || ||
Sbjct 28750554 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCA 28750495
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| ||||| || ||||| ||||| ||||||||
Sbjct 28750494 ACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28750445
>seq2
Length=36083738
Score = 122 bits (134), Expect = 2e-22
Identities = 170/236 (72%), Gaps = 12/236 (5%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| ||||| | || || || || | ||| || || ||||| || ||||||
Sbjct 2262199 TGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 2262258
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
|| || |||||||| || || | || || || ||||||||||||||||| || |||
Sbjct 2262259 GCCAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTG---GTCT 2262315
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTC 288417
||| || || || || |||||||| || || ||||| || || || | || ||||
Sbjct 2262316 GGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC 2262375
Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || | ||||| |||||||| |||| ||||| ||||| ||||||||
Sbjct 2262376 ---TCAACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428
Score = 116 bits (128), Expect = 9e-21
Identities = 165/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| | || | || || ||||||| ||| || || ||||| || ||||||||
Sbjct 2262746 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 2262805
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || | || || || | || || || || ||||| || ||||| || |||||
Sbjct 2262806 AAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGG---TCTGG 2262862
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| || || || || |||||||| || || || ||||| || || | || || ||
Sbjct 2262863 GGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTC 2262922
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| |||||||||||||||||||| ||||||||
Sbjct 2262923 CACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2262973
>seq8
Length=23026653
Score = 109 bits (120), Expect = 1e-18
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| ||||| | || || ||||| | ||| || || || || || |||||
Sbjct 4124547 TGACCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCA 4124606
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
|| || |||||||| || || | || || || |||||||| || |||| | | |||
Sbjct 4124607 GCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGG-TCT 4124665
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || |||||||| || || ||||| || || || | || ||
Sbjct 4124666 GGGGAAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGATGAC 4124725
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| | ||| |||||||||||||| || || ||||||||
Sbjct 4124726 TCCACCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 4124778
>seq6
Length=30401905
Score = 102 bits (112), Expect = 2e-16
Identities = 128/173 (74%), Gaps = 2/173 (1%)
Strand=Plus/Plus
Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212
|||| ||||| | ||| ||||||| || || ||||| ||||| || || || || |||
Sbjct 11442967 TCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCA 11443026
Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271
||| ||||| | |||| ||||||| ||| || ||||||| || ||||| ||
Sbjct 11443027 TGGCGCTCGGCTGCAAGAAGATGTACAACGTCGCC-AACCCCTTCGACTGGATGGAGCTC 11443085
Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324
|| || || | || ||||| ||||||||||| ||||| ||| ||||||| ||
Sbjct 11443086 ATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCA 11443138
Score = 93.3 bits (102), Expect = 1e-13
Identities = 126/173 (73%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212
|||| ||||| | ||| ||||||| || || ||||| ||||| || || || | |||
Sbjct 1929556 TCGGGATGAACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCA 1929497
Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271
||| ||||| | |||| ||||||| ||| || || |||| || ||||| ||
Sbjct 1929496 TGGCGCTCGGGTGCAAGAAGATGTACAACGTCGCC-AACCCGTTCGACTGGATGGAGCTC 1929438
Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324
|| || || | || ||||| ||||||||||| ||||| ||| ||||||| ||
Sbjct 1929437 ATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCA 1929385
>seq9
Length=22605696
Score = 95.1 bits (104), Expect = 3e-14
Identities = 85/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || |||||||| || || || ||||| || || | ||||| || ||
Sbjct 13619195 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACC 13619254
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct 13619255 TCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTCACGAAGATCTGCAT 13619301
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
||||| || |||||||| || || || ||||| || || | ||||| || || ||
Sbjct 15390664 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 15390605
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct 15390604 AGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 15390561
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
||||| || |||||||| || || || ||||| || || | ||||| || || ||
Sbjct 15396648 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 15396589
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct 15396588 AGCGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCAT 15396545
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
||||| || |||||||| || || || || || || || | ||||| || || |||
Sbjct 21775035 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 21774976
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| |||||||| ||||| ||||| ||||| ||||||||
Sbjct 21774975 AGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21774932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179507972448464
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