Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 143 6e-29 seq1 140 8e-28 seq4 122 2e-22 seq2 122 2e-22 seq8 109 1e-18 seq6 102 2e-16 seq9 95.1 3e-14 >seq5 Length=25164199 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 3097263 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3097322 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 3097323 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3097382 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || |||||||| || || | || || || || Sbjct 3097383 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3097442 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 3097443 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 3097489 Score = 118 bits (130), Expect = 3e-21 Identities = 146/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||||||| ||||| || ||||| | || || || |||||| Sbjct 21087489 TCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAG 21087548 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| ||||| || |||||| || ||||| ||||||||||| || || ||||| Sbjct 21087549 ATCAGGCGCTGCTG---GTCTGGGGGAATACCTTCCTTATCCTGGATCTTAGCCTTCACA 21087605 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || || || || || ||||| || || |||||| Sbjct 21087606 TTGTCGATGGTGTCGGAGCTC---TCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTC 21087662 Query 288457 TTGACGAATATCTGCAT 288473 ||||| || |||||||| Sbjct 21087663 TTGACAAAGATCTGCAT 21087679 Score = 113 bits (124), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || | || || ||||||| ||| || || ||||| || |||||||| Sbjct 21087908 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 21087967 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||||| || | || || || || || || |||||||| || ||||| Sbjct 21087968 GAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGCTG---GTCTGG 21088024 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || || || |||||||| ||||| || ||||| || || | || || || Sbjct 21088025 GGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGATGACTC 21088084 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||| || ||||| || || || ||||| ||||| ||||||||| Sbjct 21088085 GACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCATT 21088136 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| || || ||||| || || || | || || || || ||| Sbjct 21087717 TCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAG 21087776 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| || |||||| || || || ||||||||||| ||||| |||||| Sbjct 21087777 ATGAGTCTCTGCTGG---TCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACG 21087833 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || || || || || ||||| || || || ||| Sbjct 21087834 TTATCAATGGTGTCCGAGCTC---TCAACCTCAAGGGTAATAGTCTTGCCAGTGAGTGTC 21087890 Query 288457 TTGACGAATATCTGCATT 288474 ||||| || ||||||||| Sbjct 21087891 TTGACAAAAATCTGCATT 21087908 Score = 93.3 bits (102), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| | || || || |||| ||| || || ||||| || ||||| || Sbjct 21088136 TCCTCCCCTGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 21088195 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || || || | || || || || |||||||||||||| || || || Sbjct 21088196 AAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTG---GTCCGG 21088252 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || || || |||||||| || || || ||||| || || | ||| || || Sbjct 21088253 GGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTC 21088312 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || |||| |||||||| || || ||||| Sbjct 21088313 AACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 21088363 >seq1 Length=43445878 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | || || || ||||| || ||||||||| Sbjct 9972253 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9972194 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 9972193 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9972134 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | || || || || Sbjct 9972133 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9972074 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 9972073 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9972027 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | || || || ||||| || ||||||||| Sbjct 9981461 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 9981402 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 9981401 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 9981342 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | || || || || Sbjct 9981341 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 9981282 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 9981281 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9981235 >seq4 Length=32292456 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| || || ||||| ||||| || | || || || |||||| Sbjct 28750179 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 28750120 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || ||||| ||| || || ||||||||||| || || ||||| Sbjct 28750119 ATGAGCCGCTGCTGG---TCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 28750063 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || || || ||||| ||||| ||||| || ||||| Sbjct 28750062 TTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 28750003 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 28750002 ACGAAGATCTGCAT 28749989 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| || || ||||| ||||| || | || || || |||||| Sbjct 28750407 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 28750348 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || ||||| ||| || || ||||||||||| || || ||||| Sbjct 28750347 ATGAGCCGCTGCTGG---TCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 28750291 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || || || ||||| ||||| ||||| || ||||| Sbjct 28750290 TTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTC 28750231 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 28750230 ACGAAGATCTGCAT 28750217 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| || || ||||| ||||| || | || || || |||||| Sbjct 28749951 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 28749892 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || ||||| ||| || || ||||||||||| || || ||||| Sbjct 28749891 ATGAGCCGCTGCTGG---TCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 28749835 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || || | ||||||||||| || || || ||||| Sbjct 28749834 TTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTC 28749775 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 28749774 ACAAAGATCTGCAT 28749761 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| ||||| || ||||| || || || || || | || || || |||||| Sbjct 28749495 TCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAG 28749436 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || |||||||| || || || ||||| || Sbjct 28749435 ATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATTG 28749376 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| || || || || | ||||| ||||| || || || ||||| ||| Sbjct 28749375 TCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACG 28749316 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 28749315 AATATCTGCAT 28749305 Score = 87.8 bits (96), Expect = 4e-12 Identities = 156/230 (68%), Gaps = 21/230 (9%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || |||||||| Sbjct 28750656 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCA 28750597 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| || || || || ||| || ||||| || ||||| Sbjct 28750596 AGGGTGCGGCCATCCTCNAA---------------GATGAGCCGCTGCTGG---TCTGGA 28750555 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || ||||||||||| || || ||||| || || || | ||| || || Sbjct 28750554 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCA 28750495 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||| ||||| |||||||| Sbjct 28750494 ACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28750445 >seq2 Length=36083738 Score = 122 bits (134), Expect = 2e-22 Identities = 170/236 (72%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 2262199 TGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 2262258 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || |||||||| || || | || || || ||||||||||||||||| || ||| Sbjct 2262259 GCCAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTG---GTCT 2262315 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTC 288417 ||| || || || || |||||||| || || ||||| || || || | || |||| Sbjct 2262316 GGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC 2262375 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| |||| ||||| ||||| |||||||| Sbjct 2262376 ---TCAACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428 Score = 116 bits (128), Expect = 9e-21 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || | || || ||||||| ||| || || ||||| || |||||||| Sbjct 2262746 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 2262805 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || || || | || || || || ||||| || ||||| || ||||| Sbjct 2262806 AAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGG---TCTGG 2262862 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || || || |||||||| || || || ||||| || || | || || || Sbjct 2262863 GGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTC 2262922 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 2262923 CACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2262973 >seq8 Length=23026653 Score = 109 bits (120), Expect = 1e-18 Identities = 165/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || ||||| | ||| || || || || || ||||| Sbjct 4124547 TGACCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCA 4124606 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || |||||||| || || | || || || |||||||| || |||| | | ||| Sbjct 4124607 GCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGG-TCT 4124665 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || |||||||| || || ||||| || || || | || || Sbjct 4124666 GGGGAAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGATGAC 4124725 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| | ||| |||||||||||||| || || |||||||| Sbjct 4124726 TCCACCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 4124778 >seq6 Length=30401905 Score = 102 bits (112), Expect = 2e-16 Identities = 128/173 (74%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| | ||| ||||||| || || ||||| ||||| || || || || ||| Sbjct 11442967 TCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCA 11443026 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| ||||| | |||| ||||||| ||| || ||||||| || ||||| || Sbjct 11443027 TGGCGCTCGGCTGCAAGAAGATGTACAACGTCGCC-AACCCCTTCGACTGGATGGAGCTC 11443085 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || || || | || ||||| ||||||||||| ||||| ||| ||||||| || Sbjct 11443086 ATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCA 11443138 Score = 93.3 bits (102), Expect = 1e-13 Identities = 126/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| | ||| ||||||| || || ||||| ||||| || || || | ||| Sbjct 1929556 TCGGGATGAACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCA 1929497 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| ||||| | |||| ||||||| ||| || || |||| || ||||| || Sbjct 1929496 TGGCGCTCGGGTGCAAGAAGATGTACAACGTCGCC-AACCCGTTCGACTGGATGGAGCTC 1929438 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || || || | || ||||| ||||||||||| ||||| ||| ||||||| || Sbjct 1929437 ATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCA 1929385 >seq9 Length=22605696 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | ||||| || || Sbjct 13619195 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACC 13619254 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct 13619255 TCCAGCGTGATCGTCTTCCCGGTCAGCGTCTTCACGAAGATCTGCAT 13619301 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || || || ||||| || || | ||||| || || || Sbjct 15390664 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 15390605 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 15390604 AGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 15390561 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || || || ||||| || || | ||||| || || || Sbjct 15396648 CCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACCTCC 15396589 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 15396588 AGCGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCAT 15396545 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || || || || || || || | ||||| || || ||| Sbjct 21775035 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 21774976 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 21774975 AGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21774932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179507972448464