Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 192 6e-44 seq5 127 2e-24 seq2 120 3e-22 seq8 113 4e-20 seq1 107 2e-18 seq4 89.7 5e-13 >seq6 Length=30401905 Score = 192 bits (212), Expect = 6e-44 Identities = 350/505 (69%), Gaps = 8/505 (2%) Strand=Plus/Plus Query 47075 CGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACTCTGGC 47134 ||||||| | |||||||| ||||||||| | || || || | | || | || Sbjct 11442638 CGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGACGGCGGCGAG--CGCT-TCGC 11442694 Query 47135 CGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGG 47193 ||| || | |||| |||||| ||||||||| |||||||||||||| ||| |||| Sbjct 11442695 CGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGC 11442754 Query 47194 CGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAA 47253 | || || | | || | || | ||||| |||||||| || ||||||||| | Sbjct 11442755 C-ATCTTCTGGCTCAAGAAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCA 11442813 Query 47254 TCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCG 47313 |||| | ||||| ||||||||| | |||| ||||| ||| |||| || || || Sbjct 11442814 TCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTACGAC-CTCC--TCC 11442870 Query 47314 ATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGA 47373 ||| | |||| | | |||| |||| || | ||||| ||||||| ||| |||| Sbjct 11442871 GCGGCAAGCTCGACGAGGCGCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACATCGAGA 11442930 Query 47374 TGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGA 47433 |||||| || ||| || || |||| | | || || ||||||| || | |||| Sbjct 11442931 GGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATGA 11442990 Query 47434 GAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTT 47493 | |||||||||| || |||||||||||||| ||| | ||| | ||||| | Sbjct 11442991 GCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCATGGCGCTCGGCTGCAAGAAGATGT 11443050 Query 47494 ACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACT 47553 || || || || || ||||| | ||| | ||| || || ||||||||||||||| Sbjct 11443051 ACAACGTCGCCAACCCCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACT 11443110 Query 47554 TTTTCGAGAAGCGCGTCGGCGAATA 47578 | |||||||||||||||||||| || Sbjct 11443111 TCTTCGAGAAGCGCGTCGGCGACTA 11443135 Score = 190 bits (210), Expect = 2e-43 Identities = 359/521 (69%), Gaps = 8/521 (2%) Strand=Plus/Minus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118 |||| | | | ||| ||||||| | |||||||| ||||||||| | || || || Sbjct 1929901 TCGACACCGTCCCCGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATCGACGGCG 1929842 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 | | || | ||||| || | |||| |||||| ||||||||| ||||||||| Sbjct 1929841 GCGAG--CGCT-TCGCCGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCT 1929785 Query 47179 CGGGCAGCTT-TGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACG 47237 ||||| ||| |||| | || || | | || | ||| | ||||| |||||||| Sbjct 1929784 CGGGCTCCTTCTGCGCC-ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCCTCACC 1929726 Query 47238 TTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTAC 47297 || ||||||||| ||||| | ||||| ||||| ||| | |||| ||||| ||| | Sbjct 1929725 TTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTC 1929666 Query 47298 TACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAA 47357 ||| || || || ||| | |||| | | |||| || || | ||||| Sbjct 1929665 TACGAC-CTCC--TCCGCGGCAAGCTCGACGAGGCACGCGTCCAGGAGATCGTCGCCGAC 1929609 Query 47358 GCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATG 47417 ||||| | ||| |||| |||||| || ||| || || |||| | | || || ||| Sbjct 1929608 GCCGTGGACATCGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGGATG 1929549 Query 47418 AACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTA 47477 |||| ||| | ||||| |||||||||| || ||||||||||| |||||| | ||| Sbjct 1929548 AACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTC 1929489 Query 47478 AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTC 47537 || ||||| ||| || || || || ||||| | ||| | ||| || || Sbjct 1929488 GGGTGCAAGAAGATGTACAACGTCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTG 1929429 Query 47538 GAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||||||||||||||| |||||||||||||||||||| || Sbjct 1929428 CAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 1929388 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| ||||| ||| || ||||| || ||| Sbjct 27218331 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 27218272 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 27218271 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 27218212 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||||| ||| || |||| ||| | || |||||||| || || Sbjct 27218211 ACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 27218152 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 27218151 TTCACAAAGATCTGCAT 27218135 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || ||||| |||||||| || Sbjct 26903083 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 26903024 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || || |||| | |||||||| || || || Sbjct 26903023 AGGGTGCGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 26902964 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| ||| | ||||| ||| || || | | ||| || Sbjct 26902963 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGT-CGATCGTATCAGAAGACTCAAC 26902905 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || ||||||||||| || || ||||||||||||||| || Sbjct 26902904 CTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCATGCCT 26902853 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| ||||| |||||||| ||| || ||| || || ||||| || || Sbjct 26902825 GTGGACTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACCGTCCTCAAGCTGCTTGCCG 26902766 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || ||||| || |||||||||||| ||| ||| ||| Sbjct 26902765 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTC 26902706 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||||| |||||| |||| || | || || || |||| || Sbjct 26902705 ACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTC 26902646 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||| ||||||||| || Sbjct 26902645 TTCACAAAGATCTGCATGCCT 26902625 >seq5 Length=25164199 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| |||| |||||||| || ||||| ||||| || | | ||||| ||| || Sbjct 21087698 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 21087757 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || ||||| |||| | || |||||| || || || ||||||||||| ||| Sbjct 21087758 CAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTG 21087817 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| ||| ||| | | || | |||||||| ||||| || || | ||| | || || Sbjct 21087818 GATCTTCGCCTTCACGTTATCAATGGTGTCCGAGCTCTCAACCTCAAGGGTAATAGTCTT 21087877 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| || || || || |||||||||||||| Sbjct 21087878 GCCAGTGAGTGTCTTGACAAAAATCTGCAT 21087907 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| || | | |||||| ||| || ||||| || ||| Sbjct 21088395 GTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCA 21088454 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 21088455 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTT 21088514 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| |||| ||| || || | ||| | || ||||| || ||||| Sbjct 21088515 ACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTC 21088574 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 21088575 TTCACAAAGATCTGCAT 21088591 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || |||| || | ||| | || ||||| || || || ||||| ||| | Sbjct 21087908 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 21087967 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | || || ||||| || ||||| | || | |||||||| || || || Sbjct 21087968 GAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCTGGGGG 21088027 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| ||| ||| ||||| |||| |||| ||||| | ||||| Sbjct 21088028 AATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG-TCGATCGTGTCTGATGACTCGA 21088086 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || ||||| || || || || || || |||||||| Sbjct 21088087 CCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 21088135 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | | ||| || ||||| || ||| Sbjct 21088167 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 21088226 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || || |||||||||||| ||| || ||| Sbjct 21088227 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 21088286 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | | ||| || || | ||| | || ||||| |||| || Sbjct 21088287 ACGTTG-TCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGT 21088345 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || ||||| || |||||| || Sbjct 21088346 CTTGACAAAGATTTGCATGCCT 21088367 >seq2 Length=36083738 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || |||| || | ||| | || ||||| || || || ||||| ||| | Sbjct 2262746 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 2262805 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || ||||| || ||||| |||| | |||||||| || || || Sbjct 2262806 AAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 2262865 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| ||| || ||||| |||| |||| |||||| | | ||| | Sbjct 2262866 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCGATGGTGTCAGAAGACTCCA 2262924 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 | || | ||| | || |||||||||||||| || || || ||||||||| Sbjct 2262925 CCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 2262974 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | ||| || ||||| || ||| Sbjct 2262460 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2262519 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 2262520 GCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2262579 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||||| ||||| || || | ||| | || ||||| || || || Sbjct 2262580 ACGTTG-TCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGT 2262638 Query 127096 TTTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 2262639 CTTGACAAAGATCTGCAT 2262656 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| ||| || Sbjct 2262202 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2262261 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || |||||| |||||| |||||||| || || || Sbjct 2262262 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 2262321 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | || | |||||| | ||||| || Sbjct 2262322 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACC 2262381 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| || || || || |||||||| Sbjct 2262382 TCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | ||| || ||||| || ||| Sbjct 2263005 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2263064 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 2263065 GCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2263124 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || |||| ||| | || |||||||||| || Sbjct 2263125 ACATTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTC 2263184 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 2263185 TTCACAAAGATCTGCAT 2263201 >seq8 Length=23026653 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | | |||||| || || ||||| || || Sbjct 4139844 GTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCG 4139903 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| || |||||||||||| ||| ||| ||| Sbjct 4139904 GCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTC 4139963 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||||| ||| || || | ||| | | ||||||||||| || Sbjct 4139964 ACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTC 4140023 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 4140024 TTCACAAAGATCTGCAT 4140040 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||| | ||| | || ||||| || ||||| ||||| || | Sbjct 4124550 CCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 4124609 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCT--GCTGATCGGGAG 127004 | ||||| || || ||||| || || ||| |||| | |||| |||| || || | Sbjct 4124610 AGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGGTCTGGGG 4124669 Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| ||| || ||| | | |||| |||||| | ||| | Sbjct 4124670 AAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGATGACTCCA 4124729 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | | |||||||||||||| || ||||| |||||||| Sbjct 4124730 CCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 4124778 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025 |||| || || ||| |||| | |||||||| || ||||| || ||||||||||| || Sbjct 4139030 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCTTGGA 4139089 Query 127026 TTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 | ||| ||| | |||| |||| |||||||| ||| || || | ||| | | ||| Sbjct 4139090 TCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTG 4139148 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || || || ||||| |||||||| Sbjct 4139149 CCGGTTAGGGTCTTCACAAAGATCTGCAT 4139177 >seq1 Length=43445878 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 9972256 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 9972197 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||| | |||||||| ||||| Sbjct 9972196 GCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGC 9972137 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || |||||||||||| ||| ||| ||| | |||| |||| |||||||| ||| Sbjct 9972136 GGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 9972078 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | ||| || || ||||| || || || || |||||||| Sbjct 9972077 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9972027 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 9981464 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 9981405 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||| | |||||||| ||||| Sbjct 9981404 GCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGC 9981345 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || |||||||||||| ||| ||| ||| | |||| |||| |||||||| ||| Sbjct 9981344 GGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 9981286 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | ||| || || ||||| || || || || |||||||| Sbjct 9981285 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9981235 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||||| || | ||| ||||| || || || ||||| ||| || Sbjct 21648076 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21648135 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 21648136 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 21648195 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| | ||| ||||| | | || ||||| | ||||| || Sbjct 21648196 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACC 21648255 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || ||||| || || || || |||||||| Sbjct 21648256 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21648302 >seq4 Length=32292456 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || || | | ||||| || || ||||| || ||| Sbjct 28749957 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 28749898 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || ||| Sbjct 28749897 GCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 28749838 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || || | ||| | ||| ||||| || || || Sbjct 28749837 ACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTC 28749778 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 28749777 TTCACAAAGATCTGCAT 28749761 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| || ||||| || | | ||||| ||| || ||||| || ||| Sbjct 28749729 GTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCA 28749670 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 28749669 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 28749610 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| || | ||| | || |||||||| || || Sbjct 28749609 ACATTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTC 28749550 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || || |||||| || Sbjct 28749549 TTCACGAATATTTGCATGCCT 28749529 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || || | | ||||| || || ||||| || ||| Sbjct 28750185 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 28750126 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || ||| Sbjct 28750125 GCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 28750066 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || || | ||| | || |||||||| || || Sbjct 28750065 ACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 28750006 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 28750005 TTCACGAAGATCTGCAT 28749989 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || || | | ||||| || || ||||| || ||| Sbjct 28750413 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 28750354 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || ||| Sbjct 28750353 GCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 28750294 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || || | ||| | || |||||||| || || Sbjct 28750293 ACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 28750234 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 28750233 TTCACGAAGATCTGCAT 28750217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475443216853120