Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq6 192 6e-44
seq5 127 2e-24
seq2 120 3e-22
seq8 113 4e-20
seq1 107 2e-18
seq4 89.7 5e-13
>seq6
Length=30401905
Score = 192 bits (212), Expect = 6e-44
Identities = 350/505 (69%), Gaps = 8/505 (2%)
Strand=Plus/Plus
Query 47075 CGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACTCTGGC 47134
||||||| | |||||||| ||||||||| | || || || | | || | ||
Sbjct 11442638 CGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGACGGCGGCGAG--CGCT-TCGC 11442694
Query 47135 CGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGG 47193
||| || | |||| |||||| ||||||||| |||||||||||||| ||| ||||
Sbjct 11442695 CGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGC 11442754
Query 47194 CGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAA 47253
| || || | | || | || | ||||| |||||||| || ||||||||| |
Sbjct 11442755 C-ATCTTCTGGCTCAAGAAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCA 11442813
Query 47254 TCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCG 47313
|||| | ||||| ||||||||| | |||| ||||| ||| |||| || || ||
Sbjct 11442814 TCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTACGAC-CTCC--TCC 11442870
Query 47314 ATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGA 47373
||| | |||| | | |||| |||| || | ||||| ||||||| ||| ||||
Sbjct 11442871 GCGGCAAGCTCGACGAGGCGCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACATCGAGA 11442930
Query 47374 TGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGA 47433
|||||| || ||| || || |||| | | || || ||||||| || | ||||
Sbjct 11442931 GGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATGA 11442990
Query 47434 GAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTT 47493
| |||||||||| || |||||||||||||| ||| | ||| | ||||| |
Sbjct 11442991 GCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCATGGCGCTCGGCTGCAAGAAGATGT 11443050
Query 47494 ACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACT 47553
|| || || || || ||||| | ||| | ||| || || |||||||||||||||
Sbjct 11443051 ACAACGTCGCCAACCCCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACT 11443110
Query 47554 TTTTCGAGAAGCGCGTCGGCGAATA 47578
| |||||||||||||||||||| ||
Sbjct 11443111 TCTTCGAGAAGCGCGTCGGCGACTA 11443135
Score = 190 bits (210), Expect = 2e-43
Identities = 359/521 (69%), Gaps = 8/521 (2%)
Strand=Plus/Minus
Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118
|||| | | | ||| ||||||| | |||||||| ||||||||| | || || ||
Sbjct 1929901 TCGACACCGTCCCCGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATCGACGGCG 1929842
Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178
| | || | ||||| || | |||| |||||| ||||||||| |||||||||
Sbjct 1929841 GCGAG--CGCT-TCGCCGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCT 1929785
Query 47179 CGGGCAGCTT-TGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACG 47237
||||| ||| |||| | || || | | || | ||| | ||||| ||||||||
Sbjct 1929784 CGGGCTCCTTCTGCGCC-ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCCTCACC 1929726
Query 47238 TTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTAC 47297
|| ||||||||| ||||| | ||||| ||||| ||| | |||| ||||| ||| |
Sbjct 1929725 TTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTC 1929666
Query 47298 TACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAA 47357
||| || || || ||| | |||| | | |||| || || | |||||
Sbjct 1929665 TACGAC-CTCC--TCCGCGGCAAGCTCGACGAGGCACGCGTCCAGGAGATCGTCGCCGAC 1929609
Query 47358 GCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATG 47417
||||| | ||| |||| |||||| || ||| || || |||| | | || || |||
Sbjct 1929608 GCCGTGGACATCGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGGATG 1929549
Query 47418 AACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTA 47477
|||| ||| | ||||| |||||||||| || ||||||||||| |||||| | |||
Sbjct 1929548 AACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTC 1929489
Query 47478 AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTC 47537
|| ||||| ||| || || || || ||||| | ||| | ||| || ||
Sbjct 1929488 GGGTGCAAGAAGATGTACAACGTCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTG 1929429
Query 47538 GAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
|||||||||||||||| |||||||||||||||||||| ||
Sbjct 1929428 CAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 1929388
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| ||| ||||| ||| || ||||| || |||
Sbjct 27218331 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 27218272
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || || || ||||||||||||||| ||| || ||||
Sbjct 27218271 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 27218212
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||||| ||| || |||| ||| | || |||||||| || ||
Sbjct 27218211 ACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 27218152
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 27218151 TTCACAAAGATCTGCAT 27218135
Score = 118 bits (130), Expect = 1e-21
Identities = 167/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || ||||| || ||||| |||||||| ||
Sbjct 26903083 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 26903024
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || || || |||| | |||||||| || || ||
Sbjct 26903023 AGGGTGCGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 26902964
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| ||| ||| | ||||| ||| || || | | ||| ||
Sbjct 26902963 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGT-CGATCGTATCAGAAGACTCAAC 26902905
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117
|| | || | || ||||||||||| || || ||||||||||||||| ||
Sbjct 26902904 CTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCATGCCT 26902853
Score = 111 bits (122), Expect = 1e-19
Identities = 145/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| |||||||| ||||| |||||||| ||| || ||| || || ||||| || ||
Sbjct 26902825 GTGGACTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACCGTCCTCAAGCTGCTTGCCG 26902766
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | |||||||| || ||||| || |||||||||||| ||| ||| |||
Sbjct 26902765 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTC 26902706
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||||| |||||| |||| || | || || || |||| ||
Sbjct 26902705 ACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTC 26902646
Query 127097 TTTACAAAAATCTGCATGGCT 127117
|| ||||| ||||||||| ||
Sbjct 26902645 TTCACAAAGATCTGCATGCCT 26902625
>seq5
Length=25164199
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
|||||| |||| |||||||| || ||||| ||||| || | | ||||| ||| ||
Sbjct 21087698 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 21087757
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
||||| || ||||| |||| | || |||||| || || || ||||||||||| |||
Sbjct 21087758 CAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTG 21087817
Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
||| ||| ||| | | || | |||||||| ||||| || || | ||| | || ||
Sbjct 21087818 GATCTTCGCCTTCACGTTATCAATGGTGTCCGAGCTCTCAACCTCAAGGGTAATAGTCTT 21087877
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| || || || || ||||||||||||||
Sbjct 21087878 GCCAGTGAGTGTCTTGACAAAAATCTGCAT 21087907
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || || || ||||| || | | |||||| ||| || ||||| || |||
Sbjct 21088395 GTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCA 21088454
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || || || || |||||||||||| ||| || |||
Sbjct 21088455 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTT 21088514
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | ||| |||| ||| || || | ||| | || ||||| || |||||
Sbjct 21088515 ACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTC 21088574
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 21088575 TTCACAAAGATCTGCAT 21088591
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | || |||| || | ||| | || ||||| || || || ||||| ||| |
Sbjct 21087908 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 21087967
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | || || ||||| || ||||| | || | |||||||| || || ||
Sbjct 21087968 GAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCTGGGGG 21088027
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||||||||||||| ||| ||| ||||| |||| |||| ||||| | |||||
Sbjct 21088028 AATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG-TCGATCGTGTCTGATGACTCGA 21088086
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || | || | || ||||| || || || || || || ||||||||
Sbjct 21088087 CCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 21088135
Score = 87.8 bits (96), Expect = 2e-12
Identities = 142/202 (70%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | | || | | ||| || ||||| || |||
Sbjct 21088167 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 21088226
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| |||||||| || || || || |||||||||||| ||| || |||
Sbjct 21088227 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 21088286
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||| || | | ||| || || | ||| | || ||||| |||| ||
Sbjct 21088287 ACGTTG-TCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGT 21088345
Query 127096 TTTTACAAAAATCTGCATGGCT 127117
|| ||||| || |||||| ||
Sbjct 21088346 CTTGACAAAGATTTGCATGCCT 21088367
>seq2
Length=36083738
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | || |||| || | ||| | || ||||| || || || ||||| ||| |
Sbjct 2262746 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 2262805
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| || | ||| || ||||| || ||||| |||| | |||||||| || || ||
Sbjct 2262806 AAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGG 2262865
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||||||||||||| ||| || ||||| |||| |||| |||||| | | ||| |
Sbjct 2262866 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCGATGGTGTCAGAAGACTCCA 2262924
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
| || | ||| | || |||||||||||||| || || || |||||||||
Sbjct 2262925 CCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 2262974
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | | || | ||| || ||||| || |||
Sbjct 2262460 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2262519
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | |||||||| || || || ||||||||||||||| ||| || ||||
Sbjct 2262520 GCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2262579
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| |||||||| ||||| || || | ||| | || ||||| || || ||
Sbjct 2262580 ACGTTG-TCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGT 2262638
Query 127096 TTTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 2262639 CTTGACAAAGATCTGCAT 2262656
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || ||||| || || || ||||| ||| ||
Sbjct 2262202 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 2262261
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || |||||| |||||| |||||||| || || ||
Sbjct 2262262 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 2262321
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||| | | || | |||||| | ||||| ||
Sbjct 2262322 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACC 2262381
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || || |||| || || || || ||||||||
Sbjct 2262382 TCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | | || | ||| || ||||| || |||
Sbjct 2263005 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 2263064
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | |||||||| || || || ||||||||||||||| ||| || ||||
Sbjct 2263065 GCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 2263124
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | ||| || |||| ||| | || |||||||||| ||
Sbjct 2263125 ACATTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTC 2263184
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 2263185 TTCACAAAGATCTGCAT 2263201
>seq8
Length=23026653
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| ||||| || | | |||||| || || ||||| || ||
Sbjct 4139844 GTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCG 4139903
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| || |||||||||||| ||| ||| |||
Sbjct 4139904 GCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTC 4139963
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||||| ||| || || | ||| | | ||||||||||| ||
Sbjct 4139964 ACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTC 4140023
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 4140024 TTCACAAAGATCTGCAT 4140040
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||| | ||| | || ||||| || ||||| ||||| || |
Sbjct 4124550 CCACCACGGAGACGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 4124609
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCT--GCTGATCGGGAG 127004
| ||||| || || ||||| || || ||| |||| | |||| |||| || || |
Sbjct 4124610 AGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGGTCTGGGG 4124669
Query 127005 GTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||||||||||||| ||| || ||| | | |||| |||||| | ||| |
Sbjct 4124670 AAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGATGACTCCA 4124729
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| || | ||| | | |||||||||||||| || ||||| ||||||||
Sbjct 4124730 CCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 4124778
Score = 86.0 bits (94), Expect = 6e-12
Identities = 110/149 (74%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025
|||| || || ||| |||| | |||||||| || ||||| || ||||||||||| ||
Sbjct 4139030 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCTTGGA 4139089
Query 127026 TTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
| ||| ||| | |||| |||| |||||||| ||| || || | ||| | | |||
Sbjct 4139090 TCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTG 4139148
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||||| || || || ||||| ||||||||
Sbjct 4139149 CCGGTTAGGGTCTTCACAAAGATCTGCAT 4139177
>seq1
Length=43445878
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| || ||||| | || | ||||| || | || ||||| || || || ||||| |||
Sbjct 9972256 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 9972197
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| | ||||| || || ||||| || || ||| |||| | |||||||| |||||
Sbjct 9972196 GCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGC 9972137
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062
|| || |||||||||||| ||| ||| ||| | |||| |||| |||||||| |||
Sbjct 9972136 GGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 9972078
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | || | ||| || || ||||| || || || || ||||||||
Sbjct 9972077 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9972027
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| || ||||| | || | ||||| || | || ||||| || || || ||||| |||
Sbjct 9981464 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 9981405
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| | ||||| || || ||||| || || ||| |||| | |||||||| |||||
Sbjct 9981404 GCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGC 9981345
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062
|| || |||||||||||| ||| ||| ||| | |||| |||| |||||||| |||
Sbjct 9981344 GGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 9981286
Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | || | ||| || || ||||| || || || || ||||||||
Sbjct 9981285 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 9981235
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|| ||||| | || | ||||| || | ||| ||||| || || || ||||| ||| ||
Sbjct 21648076 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 21648135
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || ||| |||| | |||||||| || || ||
Sbjct 21648136 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 21648195
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| | ||| ||||| | | || ||||| | ||||| ||
Sbjct 21648196 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACC 21648255
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || || || ||||| || || || || ||||||||
Sbjct 21648256 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 21648302
>seq4
Length=32292456
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || || || || | | ||||| || || ||||| || |||
Sbjct 28749957 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 28749898
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || |||
Sbjct 28749897 GCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 28749838
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | ||| || || | ||| | ||| ||||| || || ||
Sbjct 28749837 ACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTC 28749778
Query 127097 TTTACAAAAATCTGCAT 127113
|| ||||| ||||||||
Sbjct 28749777 TTCACAAAGATCTGCAT 28749761
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || ||||| || ||||| || | | ||||| ||| || ||||| || |||
Sbjct 28749729 GTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCA 28749670
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | |||||||| || || || || |||||||||||| ||| || |||
Sbjct 28749669 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 28749610
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | |||||| || | ||| | || |||||||| || ||
Sbjct 28749609 ACATTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTC 28749550
Query 127097 TTTACAAAAATCTGCATGGCT 127117
|| || || || |||||| ||
Sbjct 28749549 TTCACGAATATTTGCATGCCT 28749529
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || || || || | | ||||| || || ||||| || |||
Sbjct 28750185 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 28750126
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || |||
Sbjct 28750125 GCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 28750066
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | ||| || || | ||| | || |||||||| || ||
Sbjct 28750065 ACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 28750006
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 28750005 TTCACGAAGATCTGCAT 28749989
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || || || || | | ||||| || || ||||| || |||
Sbjct 28750413 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCA 28750354
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || |||
Sbjct 28750353 GCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 28750294
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | ||| || || | ||| | || |||||||| || ||
Sbjct 28750293 ACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 28750234
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 28750233 TTCACGAAGATCTGCAT 28750217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475443216853120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |