Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq10 666 0.0
seq8 666 0.0
seq7 666 0.0
seq5 149 8e-31
seq3 129 7e-25
>seq10
Length=17164355
Score = 666 bits (738), Expect = 0.0
Identities = 742/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Minus
Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593
|||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 15961352 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 15961293
Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653
| ||||||||||| | || ||||| || || | || |||||||| | ||||| |
Sbjct 15961292 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 15961233
Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713
|| |||||||| ||||| ||||| || ||||| ||||| || |||| ||| | ||||||
Sbjct 15961232 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 15961173
Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773
|||||| || || || || ||||| || || | ||||||||| | ||||| ||||||||
Sbjct 15961172 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 15961113
Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833
|| ||| ||||||||||| | || ||||| || || ||||| || || || || ||
Sbjct 15961112 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 15961053
Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893
|||||||| |||||||| || | ||||| | || || || |||||||||||
Sbjct 15961052 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 15960993
Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953
| | || | ||||||||| | ||||||||||| |||||||| || ||||| || ||
Sbjct 15960992 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 15960933
Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013
|||||||| || || | |||||| || || ||||| |||||||| |||||||| |||||
Sbjct 15960932 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAA 15960873
Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073
|||| ||| ||||||| |||||||| || || | ||||||| | ||||||||| ||
Sbjct 15960872 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 15960813
Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133
|||||| | ||| || | | ||| ||||| | || || ||||| ||||| || |||||
Sbjct 15960812 TTGACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 15960753
Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193
||| ||||| ||||||||||| |||||| || |||||||||||||||||||| ||
Sbjct 15960752 AACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATATA 15960693
Query 8194 TGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAG 8253
| | ||| | | |||||| | | || || | ||||||| || ||||| |
Sbjct 15960692 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 15960633
Query 8254 CCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGA 8313
||||||||||| ||| || |||||||| || || || ||||| | || || || |||
Sbjct 15960632 CCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGA 15960573
Query 8314 AGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGG 8373
|| ||||| || ||||||||||| || ||||| || || | | ||||||| || ||
Sbjct 15960572 AGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAGG 15960513
Query 8374 TTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAA 8432
||||| || || ||||| || || ||||| ||||||| ||| |||| || || ||| |
Sbjct 15960512 CTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAGA 15960453
Query 8433 TAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGAT 8492
|| || | | | ||||| ||||||| ||||||||||| |||| || ||||| |
Sbjct 15960452 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGT 15960394
Query 8493 TGTTGGTGGAGGTTACCCAGTTACAGAA 8520
| | |||| |||| |||||| |||||
Sbjct 15960393 TTTCGGTGCTAGTTATCCAGTTGCAGAA 15960366
>seq8
Length=23026653
Score = 666 bits (738), Expect = 0.0
Identities = 742/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Minus
Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593
|||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 17291442 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 17291383
Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653
| ||||||||||| | || ||||| || || | || |||||||| | ||||| |
Sbjct 17291382 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 17291323
Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713
|| |||||||| ||||| ||||| || ||||| ||||| || |||| ||| | ||||||
Sbjct 17291322 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 17291263
Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773
|||||| || || || || ||||| || || | ||||||||| | ||||| ||||||||
Sbjct 17291262 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 17291203
Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833
|| ||| ||||||||||| | || ||||| || || ||||| || || || || ||
Sbjct 17291202 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 17291143
Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893
|||||||| |||||||| || | ||||| | || || || |||||||||||
Sbjct 17291142 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 17291083
Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953
| | || | ||||||||| | ||||||||||| |||||||| || ||||| || ||
Sbjct 17291082 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 17291023
Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013
|||||||| || || | |||||| || || ||||| |||||||| |||||||| |||||
Sbjct 17291022 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAA 17290963
Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073
|||| ||| ||||||| |||||||| || || | ||||||| | ||||||||| ||
Sbjct 17290962 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 17290903
Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133
|||||| | ||| || | | ||| ||||| | || || ||||| ||||| || |||||
Sbjct 17290902 TTGACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 17290843
Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193
||| ||||| ||||||||||| |||||| || |||||||||||||||||||| ||
Sbjct 17290842 AACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATATA 17290783
Query 8194 TGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAG 8253
| | ||| | | |||||| | | || || | ||||||| || ||||| |
Sbjct 17290782 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 17290723
Query 8254 CCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGA 8313
||||||||||| ||| || |||||||| || || || ||||| | || || || |||
Sbjct 17290722 CCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGA 17290663
Query 8314 AGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGG 8373
|| ||||| || ||||||||||| || ||||| || || | | ||||||| || ||
Sbjct 17290662 AGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAGG 17290603
Query 8374 TTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAA 8432
||||| || || ||||| || || ||||| ||||||| ||| |||| || || ||| |
Sbjct 17290602 CTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAGA 17290543
Query 8433 TAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGAT 8492
|| || | | | ||||| ||||||| ||||||||||| |||| || ||||| |
Sbjct 17290542 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGT 17290484
Query 8493 TGTTGGTGGAGGTTACCCAGTTACAGAA 8520
| | |||| |||| |||||| |||||
Sbjct 17290483 TTTCGGTGCTAGTTATCCAGTTGCAGAA 17290456
Score = 522 bits (578), Expect = 3e-143
Identities = 728/1015 (72%), Gaps = 4/1015 (0%)
Strand=Plus/Plus
Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322
|||||||| || | ||| | || || ||||| |||| || |||||||| || ||||||
Sbjct 17281597 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 17281656
Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382
| ||||||||| ||||| | ||| || || || || || || ||||| ||||| |||
Sbjct 17281657 TGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 17281716
Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442
|| || || ||||| |||||||| | ||| || || ||||| |||||||| || | |||
Sbjct 17281717 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 17281776
Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502
|| || || || || | | ||||| | |||| | ||| | || || |||||
Sbjct 17281777 TTCAGAGCCAGGCCGACTACGCCAATAGCACTCATCCATAAACCGGTGACCGGTACAAAT 17281836
Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562
|||||||||||||||| |||||| |||||| || || | ||||||||| || |||||
Sbjct 17281837 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 17281896
Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622
|| |||||||| |||||||| ||||| || || || |||| || || | ||| || |
Sbjct 17281897 AAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCGCGG 17281956
Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682
|| ||||||| ||||| || ||||| | ||| || || || || || || ||||||
Sbjct 17281957 AAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCCACGGTTGCCCCATGAATA 17282016
Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742
|| || |||| || | ||||| | || || || |||||||||||||| ||||| | |
Sbjct 17282017 GCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 17282076
Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802
||||| || || || || || | |||||| | ||| || ||||||||||| || |||||
Sbjct 17282077 GTCCAATTATGAAATCCTTGGAAGAAGAGGATGAATCGAAATATCGCTGCTACGCCAAAA 17282136
Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862
||||||||||||||||| ||| || || || ||||| || || || || || |||||
Sbjct 17282137 CTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGGATAAATCAGGAATACGGAAACAAAA 17282196
Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921
||||| || || ||||| || | |||||||| || || || | | || ||| || ||
Sbjct 17282197 ACAGCGATTGGGCCAGAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGC 17282255
Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981
| ||||| || || | |||||||||||| || ||||| || || ||||| || |||||
Sbjct 17282256 AAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCAACAAA 17282315
Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041
|| ||| || || || | ||| ||| || ||||| || || ||||| || |||||
Sbjct 17282316 AGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGTGCTTCCGGGCCCCA 17282375
Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101
||| || | | || ||| | | | | ||||| || || || || || || | |||
Sbjct 17282376 TAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGGGTGGAAACTGCTGCGGTTAAGAA 17282435
Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161
||| || || || | ||| ||| || | || || || ||||| || || |||||
Sbjct 17282436 ATTGCAACCTTCCAAATAGGAACTCGCCAATCCATGGGTATACCAAGAAGTTACAAAAGT 17282495
Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221
||| || || | |||||| || | || | |||||| ||| || || | || || ||
Sbjct 17282496 TGTCCCTGTAAACCAACCTCCTAAAGCGAAATAAGCACAAGGAAAAAGCAATAGGCCAGA 17282555
Query 7222 CCAACCAACAAAAACGAACCTATCAC-GCTTAAGCCAGTCATCGAGTACATCAAA 7275
||| || |||||||| || | || | | ||| |||||| || | | ||||||
Sbjct 17282556 CCATCCTACAAAAACAAAACGGTCCCTTCGTAA-CCAGTCGTCCATAATATCAAA 17282609
Score = 102 bits (112), Expect = 1e-16
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 7713 TGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGT 7772
||||||| || || || || |||| || || | ||| ||||| | ||||| |||||||
Sbjct 13113649 TGAACCAAATCCCTACTACATGCCAAGCAGCCAAGAAAAAGTGTAAAGAACGAGAGTTGT 13113590
Query 7773 TGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGT 7832
| || ||| ||||||||||| | || ||||| || || ||||| || | || || |
Sbjct 13113589 TAAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCATAATATTAT 13113530
Query 7833 AGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTT 7892
| |||||||| |||||||| || || ||||| | || || || ||||||||||
Sbjct 13113529 AAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTT 13113470
Query 7893 C 7893
|
Sbjct 13113469 C 13113469
>seq7
Length=26479886
Score = 666 bits (738), Expect = 0.0
Identities = 742/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Minus
Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593
|||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 22563171 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 22563112
Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653
| ||||||||||| | || ||||| || || | || |||||||| | ||||| |
Sbjct 22563111 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 22563052
Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713
|| |||||||| ||||| ||||| || ||||| ||||| || |||| ||| | ||||||
Sbjct 22563051 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 22562992
Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773
|||||| || || || || ||||| || || | ||||||||| | ||||| ||||||||
Sbjct 22562991 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 22562932
Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833
|| ||| ||||||||||| | || ||||| || || ||||| || || || || ||
Sbjct 22562931 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 22562872
Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893
|||||||| |||||||| || | ||||| | || || || |||||||||||
Sbjct 22562871 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 22562812
Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953
| | || | ||||||||| | ||||||||||| |||||||| || ||||| || ||
Sbjct 22562811 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 22562752
Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013
|||||||| || || | |||||| || || ||||| |||||||| |||||||| |||||
Sbjct 22562751 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAA 22562692
Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073
|||| ||| ||||||| |||||||| || || | ||||||| | ||||||||| ||
Sbjct 22562691 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 22562632
Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133
|||||| | ||| || | | ||| ||||| | || || ||||| ||||| || |||||
Sbjct 22562631 TTGACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 22562572
Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193
||| ||||| ||||||||||| |||||| || |||||||||||||||||||| ||
Sbjct 22562571 AACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATATA 22562512
Query 8194 TGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAG 8253
| | ||| | | |||||| | | || || | ||||||| || ||||| |
Sbjct 22562511 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 22562452
Query 8254 CCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGA 8313
||||||||||| ||| || |||||||| || || || ||||| | || || || |||
Sbjct 22562451 CCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGA 22562392
Query 8314 AGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGG 8373
|| ||||| || ||||||||||| || ||||| || || | | ||||||| || ||
Sbjct 22562391 AGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAGG 22562332
Query 8374 TTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAA 8432
||||| || || ||||| || || ||||| ||||||| ||| |||| || || ||| |
Sbjct 22562331 CTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAGA 22562272
Query 8433 TAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGAT 8492
|| || | | | ||||| ||||||| ||||||||||| |||| || ||||| |
Sbjct 22562271 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGT 22562213
Query 8493 TGTTGGTGGAGGTTACCCAGTTACAGAA 8520
| | |||| |||| |||||| |||||
Sbjct 22562212 TTTCGGTGCTAGTTATCCAGTTGCAGAA 22562185
Score = 154 bits (170), Expect = 2e-32
Identities = 208/287 (72%), Gaps = 2/287 (1%)
Strand=Plus/Minus
Query 8235 AAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGT 8294
||||||| || ||||| | ||||||||||| ||| || |||||||| || || || ||||
Sbjct 22562146 AAGGACCGCCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGT 22562087
Query 8295 GGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACA 8354
| || || || ||||| ||||| || ||||||||||| || ||||| || || |
Sbjct 22562086 TCAATCCGATCGCCGCAGAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAA 22562027
Query 8355 TGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGA 8414
| ||||||| || | |||| || | ||||| || || ||||| ||||||| ||
Sbjct 22562026 GTAAAGAACCAGAAACATGCCCACGAATATCATCAATATCTACTGGAGGGGCAGCGATGA 22561967
Query 8415 AAGCGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAAC 8473
| |||| || || ||| | || || | | | ||||| ||||||| |||||||||
Sbjct 22561966 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAAC 22561908
Query 8474 CAACCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520
|| |||| || ||||| || | |||| |||| |||||| |||||
Sbjct 22561907 CATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 22561861
>seq5
Length=25164199
Score = 149 bits (164), Expect = 8e-31
Identities = 186/255 (73%), Gaps = 0/255 (0%)
Strand=Plus/Minus
Query 6378 ACGTCTCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTC 6437
||||||| || || ||||| ||| |||| | ||| | || ||||| |||||||| || |
Sbjct 21599390 ACGTCTCAAATTCAGGATCTTCCACTGCACGGATTTTCTGGGAAACGAAGTCATAGGCAC 21599331
Query 6438 TAAGGTTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAA 6497
||||| || || || || | | ||||| || |||| ||| | || || |
Sbjct 21599330 GTAGGTTCAGAGCCAGGCCGACTACGCCAATAGTACTCATCCATTAACCGGTGACCGGTA 21599271
Query 6498 CAAACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAG 6557
|||| |||||||||||||||| |||||| |||||| || || | ||||||||| || |
Sbjct 21599270 CAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGG 21599211
Query 6558 ACCAGAAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACG 6617
|||| || |||||||| ||||| || ||||| || || || |||| || || | ||| |
Sbjct 21599210 ACCAAAAGCGATTAGCGGTGACTATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 21599151
Query 6618 CCTTGAAAGTATTTG 6632
| ||| |||||||
Sbjct 21599150 CGCGGAAGGTATTTG 21599136
>seq3
Length=46202548
Score = 129 bits (142), Expect = 7e-25
Identities = 130/168 (77%), Gaps = 1/168 (1%)
Strand=Plus/Plus
Query 7555 GTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGACCAGCACGGTTGAGCACGTC 7614
|| |||||||||||| |||||||| |||||||| ||||| |||||||||| | ||
Sbjct 10578632 GTGGTGAGCATTACGTTCGTGCATTACTTCCATAGCAAGATTTGCACGGTTGATGATATC 10578691
Query 7615 TGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATGGACTGGTTGAAGTTGAAACC 7674
||||| || | | || |||||||| | ||||| | || |||||||| ||||| ||
Sbjct 10578692 AGCCCAAGTATAAATAACGCGACCTTGGCTATCAACTACAGA-TGGTTGAAATTGAATCC 10578750
Query 7675 GTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGAACCAGAT 7722
||| || ||||| ||||| || |||| ||| | |||||||||||| ||
Sbjct 10578751 GTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAAAT 10578798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622049460686720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |