Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq10 616 2e-171 seq8 616 2e-171 seq7 616 2e-171 seq5 165 1e-35 seq3 114 2e-20 seq11 87.8 2e-12 seq4 87.8 2e-12 >seq10 Length=17164355 Score = 616 bits (682), Expect = 2e-171 Identities = 739/999 (74%), Gaps = 4/999 (0%) Strand=Plus/Plus Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797 ||||| | ||||||| | ||| |||| ||| | ||||| || || |||| ||||| Sbjct 15960356 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 15960415 Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856 ||| ||| ||||||| || || | ||| | |||||| |||| || || ||||||||| Sbjct 15960416 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 15960474 Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916 ||||||| || || || || || ||||| || ||||| || || ||||||| | | | Sbjct 15960475 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTT 15960534 Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976 | || ||||| || ||||||||||| || ||||| |||| || || || | |||| Sbjct 15960535 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACT 15960594 Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036 | || || || |||||||| ||||| |||| |||||| | || || || ||||||| Sbjct 15960595 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATG 15960654 Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096 | || | || | |||||| | |||| | | || ||||||||||||||||||| Sbjct 15960655 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 15960714 Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155 | || || |||||||||| || ||||| ||| || |||||||| ||||| || || Sbjct 15960715 TGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 15960773 Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215 || || | ||||| ||| | | || ||| | |||||||| |||||||| | ||| Sbjct 15960774 GCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATG 15960833 Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATC 180275 || | || || ||||| || ||||||| ||| |||| ||||| |||||||| |||||| Sbjct 15960834 CCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATC 15960893 Query 180276 CTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCC 180335 || ||||| || || |||||| | || ||||| ||||| ||||||||||| || ||| Sbjct 15960894 CTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGT 15960953 Query 180336 GCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCC 180395 || ||||| ||||| |||| |||||| || | | ||||||||||||| || || Sbjct 15960954 GCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCT 15961013 Query 180396 CAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACAT 180455 || | ||||||| ||||||||||| |||||||| || || || || || || ||| Sbjct 15961014 GCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCAT 15961073 Query 180456 GGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCAC 180515 || || || || || | |||||||| ||||| || |||||||| ||||| | ||| Sbjct 15961074 GGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 15961133 Query 180516 TTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 180575 |||||| |||| || |||||||| || || || ||||||||||| | || | || || Sbjct 15961134 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 15961193 Query 180576 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGT 180635 ||||| ||||| || ||||| ||||| |||||||| || | ||||| | |||||||| Sbjct 15961194 ATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGC 15961253 Query 180636 GTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCAC 180695 || | || |||||||| || | ||||||| ||| ||| ||||||||||| |||||| Sbjct 15961254 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 15961313 Query 180696 GAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734 || |||||||||||||||||||| || ||||| || ||| Sbjct 15961314 GAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 15961352 >seq8 Length=23026653 Score = 616 bits (682), Expect = 2e-171 Identities = 739/999 (74%), Gaps = 4/999 (0%) Strand=Plus/Plus Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797 ||||| | ||||||| | ||| |||| ||| | ||||| || || |||| ||||| Sbjct 17290446 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 17290505 Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856 ||| ||| ||||||| || || | ||| | |||||| |||| || || ||||||||| Sbjct 17290506 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 17290564 Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916 ||||||| || || || || || ||||| || ||||| || || ||||||| | | | Sbjct 17290565 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTT 17290624 Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976 | || ||||| || ||||||||||| || ||||| |||| || || || | |||| Sbjct 17290625 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACT 17290684 Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036 | || || || |||||||| ||||| |||| |||||| | || || || ||||||| Sbjct 17290685 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATG 17290744 Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096 | || | || | |||||| | |||| | | || ||||||||||||||||||| Sbjct 17290745 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 17290804 Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155 | || || |||||||||| || ||||| ||| || |||||||| ||||| || || Sbjct 17290805 TGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 17290863 Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215 || || | ||||| ||| | | || ||| | |||||||| |||||||| | ||| Sbjct 17290864 GCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATG 17290923 Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATC 180275 || | || || ||||| || ||||||| ||| |||| ||||| |||||||| |||||| Sbjct 17290924 CCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATC 17290983 Query 180276 CTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCC 180335 || ||||| || || |||||| | || ||||| ||||| ||||||||||| || ||| Sbjct 17290984 CTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGT 17291043 Query 180336 GCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCC 180395 || ||||| ||||| |||| |||||| || | | ||||||||||||| || || Sbjct 17291044 GCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCT 17291103 Query 180396 CAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACAT 180455 || | ||||||| ||||||||||| |||||||| || || || || || || ||| Sbjct 17291104 GCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCAT 17291163 Query 180456 GGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCAC 180515 || || || || || | |||||||| ||||| || |||||||| ||||| | ||| Sbjct 17291164 GGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 17291223 Query 180516 TTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 180575 |||||| |||| || |||||||| || || || ||||||||||| | || | || || Sbjct 17291224 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 17291283 Query 180576 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGT 180635 ||||| ||||| || ||||| ||||| |||||||| || | ||||| | |||||||| Sbjct 17291284 ATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGC 17291343 Query 180636 GTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCAC 180695 || | || |||||||| || | ||||||| ||| ||| ||||||||||| |||||| Sbjct 17291344 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 17291403 Query 180696 GAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734 || |||||||||||||||||||| || ||||| || ||| Sbjct 17291404 GAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 17291442 Score = 587 bits (650), Expect = 9e-163 Identities = 740/1014 (73%), Gaps = 2/1014 (0%) Strand=Plus/Minus Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483 ||||| || | || |||||| | | | ||||| ||||| ||||| || |||||||| Sbjct 17282609 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17282550 Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543 ||| | |||||||| ||||||| | || | || || ||| | || || || |||||| Sbjct 17282549 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17282490 Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCCTT 181603 || || || ||||| ||||| ||||||||| |||||| | || ||| |||||| | Sbjct 17282489 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTA 17282430 Query 181604 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 181663 || || || || || || ||||| | | | | || ||| | | ||||| ||||| Sbjct 17282429 ACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 17282370 Query 181664 CCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGTG 181723 || ||||| || || ||||| || ||| ||| | || || || ||| ||||||| Sbjct 17282369 CCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 17282310 Query 181724 GCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG- 181782 || ||||| || || || || || || ||||| ||| | | ||||||||||||||||| Sbjct 17282309 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGG 17282250 Query 181783 TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGT 181842 ||| || | | || || || ||||| ||| | || || || || || ||||| || || Sbjct 17282249 TCTGTTCA-ATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGT 17282191 Query 181843 CTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGG 181902 || ||||| || || ||||| ||||| |||||| |||||||||||||||||||||| || Sbjct 17282190 TTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGG 17282131 Query 181903 TGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 181962 || || ||||| || || ||| | |||||| |||| || ||||||||||||||| | || Sbjct 17282130 CGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAA 17282071 Query 181963 TCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCA 182022 || || ||||||||||| ||||| || | | || | || | || | || ||||| Sbjct 17282070 CCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCA 17282011 Query 182023 CGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGC 182082 || | |||||||| || ||||| | | | |||||||| |||||||| ||| || Sbjct 17282010 TGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGC 17281951 Query 182083 ATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTC 182142 || | ||||||||| |||||||| ||||||||||| || || || ||||| ||||| Sbjct 17281950 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTC 17281891 Query 182143 TCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGT 182202 || ||||| ||| |||| ||| |||||| | ||||| |||||||||||||| ||||| Sbjct 17281890 CCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGT 17281831 Query 182203 TCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCG 182262 || || | ||| | |||| ||| | || || | | || || ||||| ||||| || Sbjct 17281830 ACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACG 17281771 Query 182263 TGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTT 182322 ||| |||||||| || ||||| |||||| | ||| | ||||| || || || ||||| || Sbjct 17281770 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 17281711 Query 182323 CTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCA 182382 |||||| || || ||||| || || || ||| | ||||| ||| | ||| | ||||| Sbjct 17281710 CTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCA 17281651 Query 182383 ACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 || ||||| || || | ||||||||||| || |||| | || ||||| || Sbjct 17281650 GCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597 Score = 120 bits (132), Expect = 4e-22 Identities = 135/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 180375 GAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACC 180434 ||||||||||||| || || || | |||||||| ||||||||||| |||||||| Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528 Query 180435 TACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTC 180494 || || || | || || ||||| || || || || | |||||||| ||||| || Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588 Query 180495 AACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTC 180554 |||||||| ||||| | ||||| ||| |||| || |||| ||| || || || |||||| Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGTTC 13113648 Query 180555 A 180555 | Sbjct 13113649 A 13113649 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 7/141 (5%) Strand=Plus/Plus Query 181847 GTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTC 181906 ||||| || || ||||| || ||||||||||||| |||||||| || |||||| |||| Sbjct 3892115 GTATTCCTGATTTATCCACTAGGACAATCCAGTTAGTTCTTTGTGCTGAGTTT---TGTC 3892171 Query 181907 ---GCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 181963 | ||||| || | ||| | || || ||||| || |||||||||| ||| | || Sbjct 3892172 ACATCAGCGATATTTCAATTCATCCTATT-CTCCAAGGATTTCATAATTTAACGTTGAAC 3892230 Query 181964 CCCTTCCATATGATGGGTGTT 181984 || || ||||| ||||| ||| Sbjct 3892231 CCATTTCATATAATGGGAGTT 3892251 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 17312670 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 17312611 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 17312610 CCTACTTGGGGAG 17312598 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 20644798 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 20644739 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 20644738 CCTACTTGGGGAG 20644726 >seq7 Length=26479886 Score = 616 bits (682), Expect = 2e-171 Identities = 739/999 (74%), Gaps = 4/999 (0%) Strand=Plus/Plus Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797 ||||| | ||||||| | ||| |||| ||| | ||||| || || |||| ||||| Sbjct 22562175 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 22562234 Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856 ||| ||| ||||||| || || | ||| | |||||| |||| || || ||||||||| Sbjct 22562235 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 22562293 Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916 ||||||| || || || || || ||||| || ||||| || || ||||||| | | | Sbjct 22562294 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTT 22562353 Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976 | || ||||| || ||||||||||| || ||||| |||| || || || | |||| Sbjct 22562354 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACT 22562413 Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036 | || || || |||||||| ||||| |||| |||||| | || || || ||||||| Sbjct 22562414 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATG 22562473 Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096 | || | || | |||||| | |||| | | || ||||||||||||||||||| Sbjct 22562474 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 22562533 Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155 | || || |||||||||| || ||||| ||| || |||||||| ||||| || || Sbjct 22562534 TGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 22562592 Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215 || || | ||||| ||| | | || ||| | |||||||| |||||||| | ||| Sbjct 22562593 GCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATG 22562652 Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATC 180275 || | || || ||||| || ||||||| ||| |||| ||||| |||||||| |||||| Sbjct 22562653 CCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATC 22562712 Query 180276 CTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCC 180335 || ||||| || || |||||| | || ||||| ||||| ||||||||||| || ||| Sbjct 22562713 CTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGT 22562772 Query 180336 GCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCC 180395 || ||||| ||||| |||| |||||| || | | ||||||||||||| || || Sbjct 22562773 GCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCT 22562832 Query 180396 CAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACAT 180455 || | ||||||| ||||||||||| |||||||| || || || || || || ||| Sbjct 22562833 GCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCAT 22562892 Query 180456 GGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCAC 180515 || || || || || | |||||||| ||||| || |||||||| ||||| | ||| Sbjct 22562893 GGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 22562952 Query 180516 TTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 180575 |||||| |||| || |||||||| || || || ||||||||||| | || | || || Sbjct 22562953 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 22563012 Query 180576 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGT 180635 ||||| ||||| || ||||| ||||| |||||||| || | ||||| | |||||||| Sbjct 22563013 ATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGC 22563072 Query 180636 GTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCAC 180695 || | || |||||||| || | ||||||| ||| ||| ||||||||||| |||||| Sbjct 22563073 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 22563132 Query 180696 GAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734 || |||||||||||||||||||| || ||||| || ||| Sbjct 22563133 GAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 22563171 Score = 154 bits (170), Expect = 2e-32 Identities = 214/297 (72%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797 ||||| | ||||||| | ||| |||| ||| | ||||| || || |||| ||||| Sbjct 22561851 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 22561910 Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856 ||| ||| ||||||| || || | ||| | |||||| |||| || || ||||||||| Sbjct 22561911 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 22561969 Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916 ||||||| || || || || || |||| || |||| | || ||||||| | | | Sbjct 22561970 TCGCTGCCCCTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTT 22562029 Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976 | || ||||| || ||||||||||| || ||||| |||| || || || | ||| Sbjct 22562030 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACT 22562089 Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTT 180033 | || || || |||||||| ||||| |||| |||||| | || || || ||||||| Sbjct 22562090 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146 >seq5 Length=25164199 Score = 165 bits (182), Expect = 1e-35 Identities = 190/256 (74%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 182066 GCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACA 182125 |||||||| ||| || || | ||||||||| |||||||| |||||||| || || Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194 Query 182126 GCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCAT 182185 || || ||||| ||||| || ||||| ||| |||| ||| |||||| | ||||| ||| Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254 Query 182186 TTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGT 182245 ||||||||||| ||||| || || | ||| |||| ||| | || || | | || Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314 Query 182246 CTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGAC 182305 || ||||| ||||| ||||| |||||||| || ||||| ||||| | ||| ||||| Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374 Query 182306 CCAGAGTTCGAGACGT 182321 || || || ||||||| Sbjct 21599375 CCTGAATTTGAGACGT 21599390 >seq3 Length=46202548 Score = 114 bits (126), Expect = 2e-20 Identities = 127/168 (76%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 180546 ATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 180605 || ||||||||||| | || | || || ||||| ||||| || ||||| ||||| ||| Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739 Query 180606 AACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGGGCAGACGTACTCAAC 180665 ||||| || | ||||| | |||||||| || | | |||||||| || | ||||| Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680 Query 180666 CGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAAC 180713 || || ||| | ||||||||| |||||||| |||||||||||| || Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632 >seq11 Length=21200727 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 182015 GCAATTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACT 182074 || ||||| || | |||||||| || ||||| | | | |||||||| |||||||| Sbjct 4414122 GCTATTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACC 4414063 Query 182075 TTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGC 182134 ||| || || | ||||||||| |||||||| ||||||||||| || || || ||| Sbjct 4414062 TTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGC 4414003 Query 182135 TTCTGGTC 182142 || ||||| Sbjct 4414002 TTTTGGTC 4413995 >seq4 Length=32292456 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 2820607 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 2820548 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 2820547 CCTACTTGGGGAG 2820535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610322880947520