Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_015279.1
Length=190789
Score E
Sequences producing significant alignments: (Bits) Value
seq10 616 2e-171
seq8 616 2e-171
seq7 616 2e-171
seq5 165 1e-35
seq3 114 2e-20
seq11 87.8 2e-12
seq4 87.8 2e-12
>seq10
Length=17164355
Score = 616 bits (682), Expect = 2e-171
Identities = 739/999 (74%), Gaps = 4/999 (0%)
Strand=Plus/Plus
Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797
||||| | ||||||| | ||| |||| ||| | ||||| || || |||| |||||
Sbjct 15960356 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 15960415
Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856
||| ||| ||||||| || || | ||| | |||||| |||| || || |||||||||
Sbjct 15960416 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 15960474
Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916
||||||| || || || || || ||||| || ||||| || || ||||||| | | |
Sbjct 15960475 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTT 15960534
Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976
| || ||||| || ||||||||||| || ||||| |||| || || || | ||||
Sbjct 15960535 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACT 15960594
Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036
| || || || |||||||| ||||| |||| |||||| | || || || |||||||
Sbjct 15960595 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATG 15960654
Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096
| || | || | |||||| | |||| | | || |||||||||||||||||||
Sbjct 15960655 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 15960714
Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155
| || || |||||||||| || ||||| ||| || |||||||| ||||| || ||
Sbjct 15960715 TGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 15960773
Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215
|| || | ||||| ||| | | || ||| | |||||||| |||||||| | |||
Sbjct 15960774 GCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATG 15960833
Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATC 180275
|| | || || ||||| || ||||||| ||| |||| ||||| |||||||| ||||||
Sbjct 15960834 CCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATC 15960893
Query 180276 CTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCC 180335
|| ||||| || || |||||| | || ||||| ||||| ||||||||||| || |||
Sbjct 15960894 CTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGT 15960953
Query 180336 GCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCC 180395
|| ||||| ||||| |||| |||||| || | | ||||||||||||| || ||
Sbjct 15960954 GCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCT 15961013
Query 180396 CAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACAT 180455
|| | ||||||| ||||||||||| |||||||| || || || || || || |||
Sbjct 15961014 GCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCAT 15961073
Query 180456 GGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCAC 180515
|| || || || || | |||||||| ||||| || |||||||| ||||| | |||
Sbjct 15961074 GGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 15961133
Query 180516 TTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 180575
|||||| |||| || |||||||| || || || ||||||||||| | || | || ||
Sbjct 15961134 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 15961193
Query 180576 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGT 180635
||||| ||||| || ||||| ||||| |||||||| || | ||||| | ||||||||
Sbjct 15961194 ATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGC 15961253
Query 180636 GTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCAC 180695
|| | || |||||||| || | ||||||| ||| ||| ||||||||||| ||||||
Sbjct 15961254 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 15961313
Query 180696 GAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734
|| |||||||||||||||||||| || ||||| || |||
Sbjct 15961314 GAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 616 bits (682), Expect = 2e-171
Identities = 739/999 (74%), Gaps = 4/999 (0%)
Strand=Plus/Plus
Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797
||||| | ||||||| | ||| |||| ||| | ||||| || || |||| |||||
Sbjct 17290446 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 17290505
Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856
||| ||| ||||||| || || | ||| | |||||| |||| || || |||||||||
Sbjct 17290506 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 17290564
Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916
||||||| || || || || || ||||| || ||||| || || ||||||| | | |
Sbjct 17290565 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTT 17290624
Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976
| || ||||| || ||||||||||| || ||||| |||| || || || | ||||
Sbjct 17290625 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACT 17290684
Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036
| || || || |||||||| ||||| |||| |||||| | || || || |||||||
Sbjct 17290685 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATG 17290744
Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096
| || | || | |||||| | |||| | | || |||||||||||||||||||
Sbjct 17290745 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 17290804
Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155
| || || |||||||||| || ||||| ||| || |||||||| ||||| || ||
Sbjct 17290805 TGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 17290863
Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215
|| || | ||||| ||| | | || ||| | |||||||| |||||||| | |||
Sbjct 17290864 GCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATG 17290923
Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATC 180275
|| | || || ||||| || ||||||| ||| |||| ||||| |||||||| ||||||
Sbjct 17290924 CCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATC 17290983
Query 180276 CTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCC 180335
|| ||||| || || |||||| | || ||||| ||||| ||||||||||| || |||
Sbjct 17290984 CTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGT 17291043
Query 180336 GCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCC 180395
|| ||||| ||||| |||| |||||| || | | ||||||||||||| || ||
Sbjct 17291044 GCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCT 17291103
Query 180396 CAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACAT 180455
|| | ||||||| ||||||||||| |||||||| || || || || || || |||
Sbjct 17291104 GCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCAT 17291163
Query 180456 GGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCAC 180515
|| || || || || | |||||||| ||||| || |||||||| ||||| | |||
Sbjct 17291164 GGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 17291223
Query 180516 TTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 180575
|||||| |||| || |||||||| || || || ||||||||||| | || | || ||
Sbjct 17291224 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 17291283
Query 180576 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGT 180635
||||| ||||| || ||||| ||||| |||||||| || | ||||| | ||||||||
Sbjct 17291284 ATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGC 17291343
Query 180636 GTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCAC 180695
|| | || |||||||| || | ||||||| ||| ||| ||||||||||| ||||||
Sbjct 17291344 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 17291403
Query 180696 GAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734
|| |||||||||||||||||||| || ||||| || |||
Sbjct 17291404 GAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 587 bits (650), Expect = 9e-163
Identities = 740/1014 (73%), Gaps = 2/1014 (0%)
Strand=Plus/Minus
Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483
||||| || | || |||||| | | | ||||| ||||| ||||| || ||||||||
Sbjct 17282609 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17282550
Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543
||| | |||||||| ||||||| | || | || || ||| | || || || ||||||
Sbjct 17282549 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17282490
Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCCTT 181603
|| || || ||||| ||||| ||||||||| |||||| | || ||| |||||| |
Sbjct 17282489 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTA 17282430
Query 181604 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 181663
|| || || || || || ||||| | | | | || ||| | | ||||| |||||
Sbjct 17282429 ACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 17282370
Query 181664 CCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGTG 181723
|| ||||| || || ||||| || ||| ||| | || || || ||| |||||||
Sbjct 17282369 CCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 17282310
Query 181724 GCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG- 181782
|| ||||| || || || || || || ||||| ||| | | |||||||||||||||||
Sbjct 17282309 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGG 17282250
Query 181783 TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGT 181842
||| || | | || || || ||||| ||| | || || || || || ||||| || ||
Sbjct 17282249 TCTGTTCA-ATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGT 17282191
Query 181843 CTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGG 181902
|| ||||| || || ||||| ||||| |||||| |||||||||||||||||||||| ||
Sbjct 17282190 TTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGG 17282131
Query 181903 TGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 181962
|| || ||||| || || ||| | |||||| |||| || ||||||||||||||| | ||
Sbjct 17282130 CGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAA 17282071
Query 181963 TCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCA 182022
|| || ||||||||||| ||||| || | | || | || | || | || |||||
Sbjct 17282070 CCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCA 17282011
Query 182023 CGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGC 182082
|| | |||||||| || ||||| | | | |||||||| |||||||| ||| ||
Sbjct 17282010 TGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGC 17281951
Query 182083 ATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTC 182142
|| | ||||||||| |||||||| ||||||||||| || || || ||||| |||||
Sbjct 17281950 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTC 17281891
Query 182143 TCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGT 182202
|| ||||| ||| |||| ||| |||||| | ||||| |||||||||||||| |||||
Sbjct 17281890 CCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGT 17281831
Query 182203 TCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCG 182262
|| || | ||| | |||| ||| | || || | | || || ||||| ||||| ||
Sbjct 17281830 ACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACG 17281771
Query 182263 TGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTT 182322
||| |||||||| || ||||| |||||| | ||| | ||||| || || || ||||| ||
Sbjct 17281770 TGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 17281711
Query 182323 CTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCA 182382
|||||| || || ||||| || || || ||| | ||||| ||| | ||| | |||||
Sbjct 17281710 CTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCA 17281651
Query 182383 ACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436
|| ||||| || || | ||||||||||| || |||| | || ||||| ||
Sbjct 17281650 GCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597
Score = 120 bits (132), Expect = 4e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 180375 GAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACC 180434
||||||||||||| || || || | |||||||| ||||||||||| ||||||||
Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528
Query 180435 TACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTC 180494
|| || || | || || ||||| || || || || | |||||||| ||||| ||
Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588
Query 180495 AACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTC 180554
|||||||| ||||| | ||||| ||| |||| || |||| ||| || || || ||||||
Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGTTC 13113648
Query 180555 A 180555
|
Sbjct 13113649 A 13113649
Score = 89.7 bits (98), Expect = 6e-13
Identities = 106/141 (75%), Gaps = 7/141 (5%)
Strand=Plus/Plus
Query 181847 GTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTC 181906
||||| || || ||||| || ||||||||||||| |||||||| || |||||| ||||
Sbjct 3892115 GTATTCCTGATTTATCCACTAGGACAATCCAGTTAGTTCTTTGTGCTGAGTTT---TGTC 3892171
Query 181907 ---GCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAAT 181963
| ||||| || | ||| | || || ||||| || |||||||||| ||| | ||
Sbjct 3892172 ACATCAGCGATATTTCAATTCATCCTATT-CTCCAAGGATTTCATAATTTAACGTTGAAC 3892230
Query 181964 CCCTTCCATATGATGGGTGTT 181984
|| || ||||| ||||| |||
Sbjct 3892231 CCATTTCATATAATGGGAGTT 3892251
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313
|||||||||||||||| || ||||| | || ||||||| | |||||||||||||| |||
Sbjct 17312670 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 17312611
Query 141314 CCTACCTGGGGAG 141326
||||| |||||||
Sbjct 17312610 CCTACTTGGGGAG 17312598
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313
|||||||||||||||| || ||||| | || ||||||| | |||||||||||||| |||
Sbjct 20644798 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 20644739
Query 141314 CCTACCTGGGGAG 141326
||||| |||||||
Sbjct 20644738 CCTACTTGGGGAG 20644726
>seq7
Length=26479886
Score = 616 bits (682), Expect = 2e-171
Identities = 739/999 (74%), Gaps = 4/999 (0%)
Strand=Plus/Plus
Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797
||||| | ||||||| | ||| |||| ||| | ||||| || || |||| |||||
Sbjct 22562175 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 22562234
Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856
||| ||| ||||||| || || | ||| | |||||| |||| || || |||||||||
Sbjct 22562235 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 22562293
Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916
||||||| || || || || || ||||| || ||||| || || ||||||| | | |
Sbjct 22562294 TCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTT 22562353
Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976
| || ||||| || ||||||||||| || ||||| |||| || || || | ||||
Sbjct 22562354 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACT 22562413
Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCC 180036
| || || || |||||||| ||||| |||| |||||| | || || || |||||||
Sbjct 22562414 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATG 22562473
Query 180037 AACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAAC 180096
| || | || | |||||| | |||| | | || |||||||||||||||||||
Sbjct 22562474 AGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 22562533
Query 180097 TTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCT 180155
| || || |||||||||| || ||||| ||| || |||||||| ||||| || ||
Sbjct 22562534 TGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCA 22562592
Query 180156 GCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATG 180215
|| || | ||||| ||| | | || ||| | |||||||| |||||||| | |||
Sbjct 22562593 GCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATG 22562652
Query 180216 CCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATC 180275
|| | || || ||||| || ||||||| ||| |||| ||||| |||||||| ||||||
Sbjct 22562653 CCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATC 22562712
Query 180276 CTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCC 180335
|| ||||| || || |||||| | || ||||| ||||| ||||||||||| || |||
Sbjct 22562713 CTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGT 22562772
Query 180336 GCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCC 180395
|| ||||| ||||| |||| |||||| || | | ||||||||||||| || ||
Sbjct 22562773 GCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCT 22562832
Query 180396 CAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACAT 180455
|| | ||||||| ||||||||||| |||||||| || || || || || || |||
Sbjct 22562833 GCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCAT 22562892
Query 180456 GGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCAC 180515
|| || || || || | |||||||| ||||| || |||||||| ||||| | |||
Sbjct 22562893 GGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 22562952
Query 180516 TTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 180575
|||||| |||| || |||||||| || || || ||||||||||| | || | || ||
Sbjct 22562953 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 22563012
Query 180576 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGT 180635
||||| ||||| || ||||| ||||| |||||||| || | ||||| | ||||||||
Sbjct 22563013 ATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGC 22563072
Query 180636 GTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCAC 180695
|| | || |||||||| || | ||||||| ||| ||| ||||||||||| ||||||
Sbjct 22563073 GTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCAC 22563132
Query 180696 GAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734
|| |||||||||||||||||||| || ||||| || |||
Sbjct 22563133 GAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 154 bits (170), Expect = 2e-32
Identities = 214/297 (72%), Gaps = 2/297 (1%)
Strand=Plus/Plus
Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797
||||| | ||||||| | ||| |||| ||| | ||||| || || |||| |||||
Sbjct 22561851 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 22561910
Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856
||| ||| ||||||| || || | ||| | |||||| |||| || || |||||||||
Sbjct 22561911 CGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 22561969
Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916
||||||| || || || || || |||| || |||| | || ||||||| | | |
Sbjct 22561970 TCGCTGCCCCTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTT 22562029
Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976
| || ||||| || ||||||||||| || ||||| |||| || || || | |||
Sbjct 22562030 ACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACT 22562089
Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTT 180033
| || || || |||||||| ||||| |||| |||||| | || || || |||||||
Sbjct 22562090 TTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146
>seq5
Length=25164199
Score = 165 bits (182), Expect = 1e-35
Identities = 190/256 (74%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 182066 GCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACA 182125
|||||||| ||| || || | ||||||||| |||||||| |||||||| || ||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 182126 GCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCAT 182185
|| || ||||| ||||| || ||||| ||| |||| ||| |||||| | ||||| |||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 182186 TTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGT 182245
||||||||||| ||||| || || | ||| |||| ||| | || || | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 182246 CTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGAC 182305
|| ||||| ||||| ||||| |||||||| || ||||| ||||| | ||| |||||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 182306 CCAGAGTTCGAGACGT 182321
|| || || |||||||
Sbjct 21599375 CCTGAATTTGAGACGT 21599390
>seq3
Length=46202548
Score = 114 bits (126), Expect = 2e-20
Identities = 127/168 (76%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 180546 ATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 180605
|| ||||||||||| | || | || || ||||| ||||| || ||||| ||||| |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 180606 AACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGGGCAGACGTACTCAAC 180665
||||| || | ||||| | |||||||| || | | |||||||| || | |||||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 180666 CGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAAC 180713
|| || ||| | ||||||||| |||||||| |||||||||||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
>seq11
Length=21200727
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 182015 GCAATTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACT 182074
|| ||||| || | |||||||| || ||||| | | | |||||||| ||||||||
Sbjct 4414122 GCTATTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACC 4414063
Query 182075 TTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGC 182134
||| || || | ||||||||| |||||||| ||||||||||| || || || |||
Sbjct 4414062 TTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGC 4414003
Query 182135 TTCTGGTC 182142
|| |||||
Sbjct 4414002 TTTTGGTC 4413995
>seq4
Length=32292456
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313
|||||||||||||||| || ||||| | || ||||||| | |||||||||||||| |||
Sbjct 2820607 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 2820548
Query 141314 CCTACCTGGGGAG 141326
||||| |||||||
Sbjct 2820547 CCTACTTGGGGAG 2820535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610322880947520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |