Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_015286.1
Length=175230
Score E
Sequences producing significant alignments: (Bits) Value
seq10 616 2e-171
seq8 616 2e-171
seq7 616 2e-171
seq5 156 5e-33
seq6 113 5e-20
seq11 91.5 2e-13
seq3 91.5 2e-13
>seq10
Length=17164355
Score = 616 bits (682), Expect = 2e-171
Identities = 726/989 (73%), Gaps = 2/989 (0%)
Strand=Plus/Plus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| ||| | ||| | || ||||| | |||||||| || |||| |||||||| ||| |
Sbjct 15960365 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 15960424
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | |||| | ||||| || || ||||||||| ||| ||| |
Sbjct 15960425 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATCGCTGCCC 15960483
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || || || ||| ||||||| | | || || ||||
Sbjct 15960484 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 15960543
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || ||||||||||| || ||||| ||||| || || || | ||||| || || |
Sbjct 15960544 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 15960603
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
| |||||||| ||| | | || |||||||| |||||||| ||||||| | || | |
Sbjct 15960604 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 15960663
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | ||||||||||||||||||||||| || ||
Sbjct 15960664 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 15960723
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505
|||| ||||||||||| ||||| ||||||||| || ||||| || || || || | |
Sbjct 15960724 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 15960783
Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565
|||| ||| | | || ||| | |||||||| ||||||||| | |||||| | || |
Sbjct 15960784 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 15960843
Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625
| |||||||| ||||||| ||| |||| ||||| |||||||| |||||||| ||||| |
Sbjct 15960844 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 15960903
Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685
| || || ||| | || || ||||| |||||||||||||| || |||||||| ||||| |
Sbjct 15960904 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 15960963
Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745
|||| |||| |||||| || | | |||||||| |||| || || || | |
Sbjct 15960964 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 15961023
Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805
|||||| || ||||| || |||||||| ||||| || || || ||||||||||| || |
Sbjct 15961024 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 15961083
Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865
| || | ||||||||||| || || |||||||| || || | |||||||||||||
Sbjct 15961084 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 15961143
Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925
| || |||||||| || || || |||| ||||
Sbjct 15961144 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 15961203
Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985
| || ||||| ||||| |||||||| ||| | ||||||| ||| ||| | ||
Sbjct 15961204 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 15961263
Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045
||||||| || | ||||||||||| ||| ||||||||||| |||||||| |||||||
Sbjct 15961264 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 15961323
Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGCT 168074
|||||||||||||||| ||||| ||||||
Sbjct 15961324 CTCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 616 bits (682), Expect = 2e-171
Identities = 726/989 (73%), Gaps = 2/989 (0%)
Strand=Plus/Plus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| ||| | ||| | || ||||| | |||||||| || |||| |||||||| ||| |
Sbjct 17290455 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 17290514
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | |||| | ||||| || || ||||||||| ||| ||| |
Sbjct 17290515 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATCGCTGCCC 17290573
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || || || ||| ||||||| | | || || ||||
Sbjct 17290574 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 17290633
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || ||||||||||| || ||||| ||||| || || || | ||||| || || |
Sbjct 17290634 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 17290693
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
| |||||||| ||| | | || |||||||| |||||||| ||||||| | || | |
Sbjct 17290694 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 17290753
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | ||||||||||||||||||||||| || ||
Sbjct 17290754 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 17290813
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505
|||| ||||||||||| ||||| ||||||||| || ||||| || || || || | |
Sbjct 17290814 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 17290873
Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565
|||| ||| | | || ||| | |||||||| ||||||||| | |||||| | || |
Sbjct 17290874 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 17290933
Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625
| |||||||| ||||||| ||| |||| ||||| |||||||| |||||||| ||||| |
Sbjct 17290934 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 17290993
Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685
| || || ||| | || || ||||| |||||||||||||| || |||||||| ||||| |
Sbjct 17290994 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 17291053
Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745
|||| |||| |||||| || | | |||||||| |||| || || || | |
Sbjct 17291054 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 17291113
Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805
|||||| || ||||| || |||||||| ||||| || || || ||||||||||| || |
Sbjct 17291114 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 17291173
Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865
| || | ||||||||||| || || |||||||| || || | |||||||||||||
Sbjct 17291174 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 17291233
Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925
| || |||||||| || || || |||| ||||
Sbjct 17291234 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 17291293
Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985
| || ||||| ||||| |||||||| ||| | ||||||| ||| ||| | ||
Sbjct 17291294 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 17291353
Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045
||||||| || | ||||||||||| ||| ||||||||||| |||||||| |||||||
Sbjct 17291354 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 17291413
Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGCT 168074
|||||||||||||||| ||||| ||||||
Sbjct 17291414 CTCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 612 bits (678), Expect = 2e-170
Identities = 742/1004 (74%), Gaps = 6/1004 (1%)
Strand=Plus/Minus
Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554
|| |||||| | | |||| ||||| |||||||| || |||||||| || | ||||||
Sbjct 17282597 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 17282538
Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614
|| ||||||| | ||| | || |||||| |||| ||||| |||| || || ||||
Sbjct 17282537 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 17282478
Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672
||||| || || ||||| ||||||||| |||| || |||| ||||||| | || ||||
Sbjct 17282477 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCAGCAG 17282420
Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732
|| || || || || | | | || ||| | |||| || ||||| || || ||||
Sbjct 17282419 TTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 17282360
Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792
|||||||||| | ||||||||| | || || || ||| ||||||| || ||||| |
Sbjct 17282359 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATG 17282300
Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851
||||||| || ||||| ||||||||| | ||||| |||||||| || || ||| || |
Sbjct 17282299 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 17282240
Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911
| || || || ||||| ||| | |||||||| || ||||||||||||||| ||| ||
Sbjct 17282239 -TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTC 17282181
Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971
|| || || || ||||| ||||| ||||||| || || || ||| || || ||||
Sbjct 17282180 CTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 17282121
Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031
|| || |||||| | |||||| | |||||||| ||||| ||||| |||| |||||||||
Sbjct 17282120 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 17282061
Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091
|||||||| || || || | || || | || |||| | || |||||||| | ||
Sbjct 17282060 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 17282001
Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGC 169151
|| || || ||||| | | | || ||||| |||||||| ||| || ||| ||
Sbjct 17282000 GTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 17281941
Query 169152 ACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 169211
||||| | || || || ||||||||||| || || || || || ||||| || ||||||
Sbjct 17281940 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 17281881
Query 169212 GGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATG 169271
||| |||| || ||||| | ||||| |||||||||||||| ||||| || || |
Sbjct 17281880 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 17281821
Query 169272 GGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGAC 169331
||| | |||| ||| | || || | | || || ||||| ||||| ||||| ||||||
Sbjct 17281820 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 17281761
Query 169332 TTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAG 169391
|| |||||||| || ||| | ||||| |||||||| || |||||||| |||||||||||
Sbjct 17281760 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 17281701
Query 169392 AACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAG 169451
|| || || || ||||| ||| ||||||| ||| | ||| || ||||| ||||||||
Sbjct 17281700 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 17281641
Query 169452 AACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495
|| || | ||||||||||| || || || || || || || ||
Sbjct 17281640 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597
Score = 114 bits (126), Expect = 1e-20
Identities = 132/178 (74%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 167715 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACG 167774
|||||||| |||| || || || | |||||||| || ||||| || ||||||||
Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528
Query 167775 TATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 167834
||||| || | || ||||||||||| || || || | ||||||||||| || ||
Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588
Query 167835 AACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGT 167892
|||||||| || || | ||||| |||||||| || |||| ||| || || || ||||
Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGT 13113646
>seq7
Length=26479886
Score = 616 bits (682), Expect = 2e-171
Identities = 726/989 (73%), Gaps = 2/989 (0%)
Strand=Plus/Plus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| ||| | ||| | || ||||| | |||||||| || |||| |||||||| ||| |
Sbjct 22562184 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22562243
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | |||| | ||||| || || ||||||||| ||| ||| |
Sbjct 22562244 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATCGCTGCCC 22562302
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||||||| || || || ||| ||||||| | | || || ||||
Sbjct 22562303 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 22562362
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || ||||||||||| || ||||| ||||| || || || | ||||| || || |
Sbjct 22562363 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 22562422
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
| |||||||| ||| | | || |||||||| |||||||| ||||||| | || | |
Sbjct 22562423 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562482
Query 167386 TTTTCCACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACC 167445
|| | |||||| | |||| | | ||||||||||||||||||||||| || ||
Sbjct 22562483 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 22562542
Query 167446 GTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTG 167505
|||| ||||||||||| ||||| ||||||||| || ||||| || || || || | |
Sbjct 22562543 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 22562602
Query 167506 CTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTA 167565
|||| ||| | | || ||| | |||||||| ||||||||| | |||||| | || |
Sbjct 22562603 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 22562662
Query 167566 TCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 167625
| |||||||| ||||||| ||| |||| ||||| |||||||| |||||||| ||||| |
Sbjct 22562663 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 22562722
Query 167626 CCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACG 167685
| || || ||| | || || ||||| |||||||||||||| || |||||||| ||||| |
Sbjct 22562723 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 22562782
Query 167686 GTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATG 167745
|||| |||| |||||| || | | |||||||| |||| || || || | |
Sbjct 22562783 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 22562842
Query 167746 GTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCG 167805
|||||| || ||||| || |||||||| ||||| || || || ||||||||||| || |
Sbjct 22562843 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 22562902
Query 167806 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGG 167865
| || | ||||||||||| || || |||||||| || || | |||||||||||||
Sbjct 22562903 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 22562962
Query 167866 CAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCA 167925
| || |||||||| || || || |||| ||||
Sbjct 22562963 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 22563022
Query 167926 ACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTA 167985
| || ||||| ||||| |||||||| ||| | ||||||| ||| ||| | ||
Sbjct 22563023 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 22563082
Query 167986 CTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATG 168045
||||||| || | ||||||||||| ||| ||||||||||| |||||||| |||||||
Sbjct 22563083 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 22563142
Query 168046 CTCACAACTTCCCTCTCGACCTTGCTGCT 168074
|||||||||||||||| ||||| ||||||
Sbjct 22563143 CTCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 176 bits (194), Expect = 5e-39
Identities = 227/311 (73%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146
||| ||| | ||| | || ||||| | |||||||| || |||| |||||||| ||| |
Sbjct 22561860 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22561919
Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205
|||||||||||| || | | |||| | ||||| || || ||||||||| ||| ||| |
Sbjct 22561920 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATCGCTGCCC 22561978
Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265
|||| || || || |||| ||| || | | ||| ||||||| | | || || ||||
Sbjct 22561979 CTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACA 22562038
Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325
| || ||||||||||| || ||||| ||||| || || || | |||| || || |
Sbjct 22562039 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAA 22562098
Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385
| |||||||| ||| | | || |||||||| |||||||| ||||||| | || | |
Sbjct 22562099 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562158
Query 167386 TTTTCCACTTC 167396
|| | ||||||
Sbjct 22562159 TTCTACACTTC 22562169
>seq5
Length=25164199
Score = 156 bits (172), Expect = 5e-33
Identities = 188/256 (73%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 169125 GCAAATACTTTCAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTACT 169184
|||||||| ||| || ||| || ||||| | || || || |||||||| || ||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 169185 GCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCAT 169244
|| || || || ||||| || ||||||||| |||| || ||||| | ||||| |||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 169245 TTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGT 169304
||||||||||| ||||| || || | ||| |||| ||| | || || | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 169305 CTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGAT 169364
|| ||||| ||||| ||||| |||||||| |||||||| | ||| | |||| ||||||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 169365 CCAGAGTTTGAGACGT 169380
|| || ||||||||||
Sbjct 21599375 CCTGAATTTGAGACGT 21599390
>seq6
Length=30401905
Score = 113 bits (124), Expect = 5e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 169305 CTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGAT 169364
|| ||||| ||| | |||| |||||||| |||| |||||| | | | ||||||||| ||
Sbjct 9625634 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAGAACAT 9625693
Query 169365 CCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGG 169424
|| || |||||||| |||| |||||| || || || || ||||| || ||||||| |||
Sbjct 9625694 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 9625753
Query 169425 TTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGA 169484
| | || |||| ||| ||| || || | ||||||||||| || || || ||
Sbjct 9625754 ATGATAACTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGT 9625813
Query 169485 GGTAA 169489
|| ||
Sbjct 9625814 GGAAA 9625818
>seq11
Length=21200727
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 169368 GAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTA 169427
|| || ||||| ||||||||||| || || || || ||||| ||| ||||||| ||| |
Sbjct 11535661 GAATTGGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATG 11535602
Query 169428 GCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGT 169487
||| || ||||| |||||||| || || | ||||||||||| || || || || ||
Sbjct 11535601 GCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGA 11535542
Query 169488 AATGCCCT 169495
|| || ||
Sbjct 11535541 AACGCTCT 11535534
>seq3
Length=46202548
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/132 (76%), Gaps = 1/132 (1%)
Strand=Plus/Minus
Query 167922 TTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTG 167981
||||| || ||||| ||||| |||||||| ||| | ||||||| ||| ||| |
Sbjct 10578762 TTCAATCTAAACGGATTCAATTTCAACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATT 10578704
Query 167982 CCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGT 168041
||||||||| || | |||||||||| ||| | ||||||||| |||||||| |||
Sbjct 10578703 TATACTTGGGCTGATATCATCAACCGTGCAAATCTTGCTATGGAAGTAATGCACGAACGT 10578644
Query 168042 AATGCTCACAAC 168053
||||||||| ||
Sbjct 10578643 AATGCTCACCAC 10578632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 560540110371200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |