Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq10 596 2e-165
seq8 596 2e-165
seq7 596 2e-165
seq5 156 5e-33
seq6 82.4 9e-11
>seq10
Length=17164355
Score = 596 bits (660), Expect = 2e-165
Identities = 730/991 (74%), Gaps = 8/991 (1%)
Strand=Plus/Plus
Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853
|||||| | ||| | || ||| | || ||||| || |||| ||||| ||||| ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912
|||||||| || | ||| | ||||| ||||| || || | || ||| | || || ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972
||| || ||||| || ||||| || || || || ||||||| | | || || |||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032
|| ||||||||||| || | || | || || || || | ||||| ||||||||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGT 182092
||||||||||| || ||||||||||| | || || || ||||||| | || ||||
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 182093 TTTCCACTTCCTGATCGGCATCTACGCCT---ACATGGGACGTGAGTGGGAACTTTCTTA 182149
| | |||||| | | || | || || | | ||||| |||||||||||||| ||
Sbjct 15960665 TCTACACTTCTTACTTGG--TGTA-GCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTT 15960721
Query 182150 CCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATC 182209
||| | ||||||||||| ||||| ||| ||||| || ||||| || || || || |
Sbjct 15960722 CCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 15960781
Query 182210 TGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGG 182269
||||| ||||| | || ||| | |||||||| ||||| |||| ||||| | ||
Sbjct 15960782 CGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 15960841
Query 182270 AATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCA 182329
||| || || || ||||||| |||| | || ||||| || ||||| ||||| ||||||||
Sbjct 15960842 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 15960901
Query 182330 TCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCA 182389
||| || |||||||| |||||||| ||||||||||| ||||| || || ||||| |||||
Sbjct 15960902 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 15960961
Query 182390 CGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTA 182449
||||| ||||| || ||| | || | || || ||||| | || || || |
Sbjct 15960962 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 15961021
Query 182450 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTT 182509
||||||| || |||||||| |||||||| ||||| || || || || ||||| || ||
Sbjct 15961022 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 15961081
Query 182510 CGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCT 182569
|| || || ||||||||||| || || |||||||| ||||| || ||||||||| |
Sbjct 15961082 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTT 15961141
Query 182570 TGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATT 182629
||||| |||||||| || || || |||||||| || | ||| | || ||||| ||
Sbjct 15961142 GGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 15961201
Query 182630 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAA 182689
||| || ||||| ||||| |||||||| || | ||||| | || ||||| || ||||
Sbjct 15961202 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 15961261
Query 182690 CACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 182749
|||||||| ||| | | ||||||||| ||||||||||||||| ||||| || |||||
Sbjct 15961262 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 15961321
Query 182750 CGCACACAACTTCCCACTAGATCTTGCTGCT 182780
|| ||||||||||| ||||| || ||||||
Sbjct 15961322 TGCTCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 596 bits (660), Expect = 2e-165
Identities = 730/991 (74%), Gaps = 8/991 (1%)
Strand=Plus/Plus
Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853
|||||| | ||| | || ||| | || ||||| || |||| ||||| ||||| ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912
|||||||| || | ||| | ||||| ||||| || || | || ||| | || || ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972
||| || ||||| || ||||| || || || || ||||||| | | || || |||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032
|| ||||||||||| || | || | || || || || | ||||| ||||||||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGT 182092
||||||||||| || ||||||||||| | || || || ||||||| | || ||||
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 182093 TTTCCACTTCCTGATCGGCATCTACGCCT---ACATGGGACGTGAGTGGGAACTTTCTTA 182149
| | |||||| | | || | || || | | ||||| |||||||||||||| ||
Sbjct 17290755 TCTACACTTCTTACTTGG--TGTA-GCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTT 17290811
Query 182150 CCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATC 182209
||| | ||||||||||| ||||| ||| ||||| || ||||| || || || || |
Sbjct 17290812 CCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 17290871
Query 182210 TGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGG 182269
||||| ||||| | || ||| | |||||||| ||||| |||| ||||| | ||
Sbjct 17290872 CGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 17290931
Query 182270 AATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCA 182329
||| || || || ||||||| |||| | || ||||| || ||||| ||||| ||||||||
Sbjct 17290932 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 17290991
Query 182330 TCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCA 182389
||| || |||||||| |||||||| ||||||||||| ||||| || || ||||| |||||
Sbjct 17290992 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 17291051
Query 182390 CGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTA 182449
||||| ||||| || ||| | || | || || ||||| | || || || |
Sbjct 17291052 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 17291111
Query 182450 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTT 182509
||||||| || |||||||| |||||||| ||||| || || || || ||||| || ||
Sbjct 17291112 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 17291171
Query 182510 CGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCT 182569
|| || || ||||||||||| || || |||||||| ||||| || ||||||||| |
Sbjct 17291172 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTT 17291231
Query 182570 TGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATT 182629
||||| |||||||| || || || |||||||| || | ||| | || ||||| ||
Sbjct 17291232 GGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 17291291
Query 182630 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAA 182689
||| || ||||| ||||| |||||||| || | ||||| | || ||||| || ||||
Sbjct 17291292 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 17291351
Query 182690 CACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 182749
|||||||| ||| | | ||||||||| ||||||||||||||| ||||| || |||||
Sbjct 17291352 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 17291411
Query 182750 CGCACACAACTTCCCACTAGATCTTGCTGCT 182780
|| ||||||||||| ||||| || ||||||
Sbjct 17291412 TGCTCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 580 bits (642), Expect = 1e-160
Identities = 735/1008 (73%), Gaps = 2/1008 (0%)
Strand=Plus/Minus
Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252
|| |||||| | | | || || ||||| ||||| || |||||||| || | ||| ||
Sbjct 17282597 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 17282538
Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312
|| ||||||| | || | || |||||| |||| || ||| ||||||| || ||||
Sbjct 17282537 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 17282478
Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCTGT 183371
|||||||||||| | || ||||||| | |||||| || ||||||| | ||||| ||
Sbjct 17282477 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGCAGCAGT 17282419
Query 183372 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCA 183431
|| || ||||| | | | | || ||| | || |||| ||||| || || | ||
Sbjct 17282418 TTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCACA 17282359
Query 183432 AGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGG 183491
|||||| ||| || ||||| ||| | || || || |||| |||||| || ||||| ||
Sbjct 17282358 AGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGG 17282299
Query 183492 TGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTAT 183551
|| ||||| || || ||||||||| | || || |||||||||||||| | || |
Sbjct 17282298 GGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATT 17282239
Query 183552 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCT 183611
|| ||||| ||||| ||| | |||||||| || || ||||||||||| ||||||||
Sbjct 17282238 GCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCT 17282179
Query 183612 TATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAAT 183671
|| ||||||||||| || || ||||||||||| || ||||| || |||||||| ||
Sbjct 17282178 GATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 17282119
Query 183672 CTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATAT 183731
||| ||||| | | ||| | || || || || || |||||||| ||||| || |||||
Sbjct 17282118 ATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATAT 17282059
Query 183732 GATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGT 183791
|||||||||||| || || |||| | || || || | ||||| ||||| | || ||
Sbjct 17282058 GATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACCGT 17281999
Query 183792 AGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCAC 183851
|| || || | | ||| || || || ||||| || ||| || ||| | | ||
Sbjct 17281998 GGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCAAC 17281939
Query 183852 TCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGG 183911
||||| ||||| || ||||| ||||| || || ||||| || ||||| |||||||| ||
Sbjct 17281938 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGG 17281879
Query 183912 GGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGG 183971
||||| ||| |||||| |||||||| || ||||||||| | ||||| || |||| ||
Sbjct 17281878 TGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACCGG 17281819
Query 183972 TCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTT 184031
| | ||| | | |||||||| | | || || ||||| || || ||||| ||||| ||
Sbjct 17281818 TTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGACTT 17281759
Query 184032 TGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAA 184091
|| || || ||| | ||||| |||||||| ||||||||||| |||||||| || ||
Sbjct 17281758 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 17281699
Query 184092 CATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAA 184151
|| ||| | || || || | ||||| ||| | ||| || ||||| || ||||| ||
Sbjct 17281698 TATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAA 17281639
Query 184152 TTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
| ||||||| || |||||||| |||| | || || ||||||| |||
Sbjct 17281638 TCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 17281591
Score = 120 bits (132), Expect = 4e-22
Identities = 117/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 182451 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTC 182510
|||||||| || |||||||| |||||||| ||||| || | || || ||||| || ||
Sbjct 13113499 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTT 13113558
Query 182511 GGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 182570
|| || || ||||||||||| || || |||||||| ||||| || ||||| ||| |
Sbjct 13113559 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTG 13113618
Query 182571 GCTGCATGGCCTGTTGTTGGAATCTGGTTCA 182601
||||| |||| ||| || || || |||||||
Sbjct 13113619 GCTGCTTGGCATGTAGTAGGGATTTGGTTCA 13113649
>seq7
Length=26479886
Score = 596 bits (660), Expect = 2e-165
Identities = 730/991 (74%), Gaps = 8/991 (1%)
Strand=Plus/Plus
Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853
|||||| | ||| | || ||| | || ||||| || |||| ||||| ||||| ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912
|||||||| || | ||| | ||||| ||||| || || | || ||| | || || ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972
||| || ||||| || ||||| || || || || ||||||| | | || || |||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032
|| ||||||||||| || | || | || || || || | ||||| ||||||||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGT 182092
||||||||||| || ||||||||||| | || || || ||||||| | || ||||
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 182093 TTTCCACTTCCTGATCGGCATCTACGCCT---ACATGGGACGTGAGTGGGAACTTTCTTA 182149
| | |||||| | | || | || || | | ||||| |||||||||||||| ||
Sbjct 22562484 TCTACACTTCTTACTTGG--TGTA-GCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTT 22562540
Query 182150 CCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATC 182209
||| | ||||||||||| ||||| ||| ||||| || ||||| || || || || |
Sbjct 22562541 CCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 22562600
Query 182210 TGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGG 182269
||||| ||||| | || ||| | |||||||| ||||| |||| ||||| | ||
Sbjct 22562601 CGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 22562660
Query 182270 AATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCA 182329
||| || || || ||||||| |||| | || ||||| || ||||| ||||| ||||||||
Sbjct 22562661 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 22562720
Query 182330 TCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCA 182389
||| || |||||||| |||||||| ||||||||||| ||||| || || ||||| |||||
Sbjct 22562721 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 22562780
Query 182390 CGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTA 182449
||||| ||||| || ||| | || | || || ||||| | || || || |
Sbjct 22562781 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 22562840
Query 182450 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTT 182509
||||||| || |||||||| |||||||| ||||| || || || || ||||| || ||
Sbjct 22562841 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 22562900
Query 182510 CGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCT 182569
|| || || ||||||||||| || || |||||||| ||||| || ||||||||| |
Sbjct 22562901 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTT 22562960
Query 182570 TGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATT 182629
||||| |||||||| || || || |||||||| || | ||| | || ||||| ||
Sbjct 22562961 GGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 22563020
Query 182630 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAA 182689
||| || ||||| ||||| |||||||| || | ||||| | || ||||| || ||||
Sbjct 22563021 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 22563080
Query 182690 CACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 182749
|||||||| ||| | | ||||||||| ||||||||||||||| ||||| || |||||
Sbjct 22563081 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 22563140
Query 182750 CGCACACAACTTCCCACTAGATCTTGCTGCT 182780
|| ||||||||||| ||||| || ||||||
Sbjct 22563141 TGCTCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 132 bits (146), Expect = 6e-26
Identities = 217/310 (70%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853
|||||| | ||| | || ||| | || ||||| || |||| ||||| ||||| ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912
|||||||| || | ||| | ||||| ||||| || || | || ||| | || || ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972
||| || ||||| || | ||| || | | || ||||||| | | || || |||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032
|| ||||||||||| || | || | || || || || | |||| ||||||||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGT 182092
||||||||||| || ||||||||||| | || || || ||||||| | || ||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562159
Query 182093 TTTCCACTTC 182102
| | ||||||
Sbjct 22562160 TCTACACTTC 22562169
>seq5
Length=25164199
Score = 156 bits (172), Expect = 5e-33
Identities = 188/256 (73%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 183823 GCAAACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACA 183882
||||| || ||| || ||| | | ||||||| ||||| || ||||| || || ||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 183883 GCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCAC 183942
|| ||||| || ||||| |||||||| || ||||| ||| |||||| |||||||| ||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 183943 TTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGG 184002
||||||||| | ||||| || |||| ||| ||| | | |||||||| | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 184003 CTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGAT 184062
|| ||||| || || ||||| ||||| || || || | ||| | |||| ||||||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 184063 CCAGAATTTGAGACGT 184078
|| |||||||||||||
Sbjct 21599375 CCTGAATTTGAGACGT 21599390
>seq6
Length=30401905
Score = 82.4 bits (90), Expect = 9e-11
Identities = 128/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 183996 CATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGC 184055
||| | ||| ||||| || | |||| ||||| || || ||||| | | | |||||
Sbjct 9625627 CATAGAGCTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGC 9625686
Query 184056 AGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACG 184115
|||| |||| ||||||||||| |||| ||| || || || ||| | || || | | ||
Sbjct 9625687 AGAACATCCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCG 9625746
Query 184116 TGCATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATT 184175
||| ||| | | || |||| || ||| ||| ||||||| || |||||||| |
Sbjct 9625747 TGCGTGGATGATAACTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCT 9625806
Query 184176 ACC 184178
|||
Sbjct 9625807 ACC 9625809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611621923614400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |