Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5 161 2e-34 seq2 152 1e-31 seq6 143 6e-29 seq8 134 3e-26 seq4 129 1e-24 seq1 129 1e-24 seq9 111 3e-19 >seq5 Length=25164199 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || || || ||||| || ||||| || || ||||| ||| Sbjct 21088155 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCG 21088214 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || ||||| || || ||||| || Sbjct 21088215 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGG 21088274 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| ||| ||||| |||||||| || ||| || || |||||||| | ||||| Sbjct 21088275 ATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTG 21088334 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 21088335 CCAGTCAAGGTCTTGACAAAGATTTGCAT 21088363 Score = 140 bits (154), Expect = 7e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || ||||| ||||| || ||||| || | ||||| || ||||| Sbjct 21087704 GTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTG 21087763 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| |||| || |||||||| || ||||| || || || || || || Sbjct 21087764 CTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTT 21087823 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| |||||||||||||| || || || |||||||||| ||||| || || Sbjct 21087824 CGCCTTCACGTTATCAATGGTGTCCGAGCTCTCAACCTCAAGGGTAATAGTCTTGCCAGT 21087883 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 | || || || || | |||||| Sbjct 21087884 GAGTGTCTTGACAAAAATCTGCATT 21087908 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || || || || ||||| || ||||| || | |||||||||| Sbjct 21088383 ACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCG 21088442 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 21088443 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGG 21088502 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || |||||||| ||||| || || |||||||| | ||||| Sbjct 21088503 ATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTG 21088562 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | ||||| Sbjct 21088563 CCAGTGAGAGTCTTCACAAAGATCTGCAT 21088591 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| ||||| || || | || || ||| Sbjct 3097281 ACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCG 3097340 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || ||||| ||||| || Sbjct 3097341 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGG 3097400 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||||||||| ||||| || || || | ||||| Sbjct 3097401 ATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTC 3097460 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 3097461 CCCGTCAGGGTCTTCACGAAGATCTGCAT 3097489 >seq2 Length=36083738 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || ||||| || ||||| || || ||||| || Sbjct 2262448 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCC 2262507 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| || |||||||| || ||||| || Sbjct 2262508 AGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 2262567 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || ||||||||||| || || || || ||||| | ||||| Sbjct 2262568 ATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTG 2262627 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || || || | ||||| Sbjct 2262628 CCTGTGAGGGTCTTGACAAAGATCTGCAT 2262656 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || ||||| ||||| || || | ||||| || Sbjct 2262220 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCCTCC 2262279 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || |||||||| ||||| || || ||||| || Sbjct 2262280 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGG 2262339 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||||||||| || || || || || | || | ||||| Sbjct 2262340 ATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTC 2262399 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | ||||| Sbjct 2262400 CCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428 >seq6 Length=30401905 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||||||||||||||| ||||| |||||||| || || || | || || || Sbjct 26902837 ACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACCGTCCTCA 26902778 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || ||||| ||||| || || || ||||| || Sbjct 26902777 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGG 26902718 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || |||||||| || || || || || | |||||| Sbjct 26902717 ATCTTCGCCTTCACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTT 26902658 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| || || || || | ||||| Sbjct 26902657 CCTGTCAAGGTCTTCACAAAGATCTGCAT 26902629 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| || | |||||||| || |||||||| || || || ||||| ||||| || || Sbjct 27218355 CTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTG 27218296 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||||| || |||||||| || |||||||| || || || ||||| || || ||||| Sbjct 27218295 CGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCC 27218236 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 || ||||| || || || |||||| || |||||||||||||| || || || ||| Sbjct 27218235 TCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGG 27218176 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | || || || || | ||||| Sbjct 27218175 GTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 27218135 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | |||||||| || ||||| |||||||| || || || | ||||| ||| Sbjct 26903065 ACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGTCCATCCTCG 26903006 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||| ||||| || || || ||||| || ||||| || || ||||| || Sbjct 26903005 AGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGG 26902946 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || || || ||| || || ||||| |||| ||||| Sbjct 26902945 ATCTTCGCCTTCACGTTGTCGATCGTATCAGAAGACTCAACCTCAAGCGTAATGGTCTTG 26902886 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || || || | ||||| Sbjct 26902885 CCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || |||||||| || || || | ||||| || Sbjct 26902609 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCT 26902550 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || ||||| ||||| || |||||||| || ||||||||| Sbjct 26902549 AGTTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGA 26902490 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || | ||||| || || || || || || ||||| | ||||| Sbjct 26902489 ATCTTGGCCTTCACATCGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTG 26902430 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 26902429 CCAGTGAGTGTCTTCACAAAGATCTGCAT 26902401 Score = 84.2 bits (92), Expect = 5e-11 Identities = 86/111 (77%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| || || || |||||||| ||||| || | ||||| || Sbjct 27218878 ACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCA 27218819 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGT-CTGGAGGAATGCCTTC 195041 ||||||||||| || ||||| || || || |||| | || || ||||| || Sbjct 27218818 AGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGGATGCCCTC 27218768 >seq8 Length=23026653 Score = 134 bits (148), Expect = 3e-26 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || ||||| ||||| || ||||| || | || || ||| Sbjct 4124568 ACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCG 4124627 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCG--TTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||||||| || |||||||| || || || |||||||| | |||||| || ||||| | Sbjct 4124628 AGCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGGTCTGGGGAAATGCCCTCCTTGTCCT 4124687 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 | || ||| ||| || || || |||||||| || ||||| |||||||| | | || Sbjct 4124688 GGATCTTTGCCTTCACATTGTCGATGGTGTCTGATGACTCCACCTCAAGGGTGATGGACT 4124747 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || |||| ||| || || || | ||||| Sbjct 4124748 TGCCGGTCAGAGTCTTCACAAAGATCTGCAT 4124778 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || |||||||| || ||||| ||||| || ||||| || | || || ||| Sbjct 4139832 ACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCG 4139891 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||| || || || ||||| || Sbjct 4139892 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGG 4139951 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||||||||| ||||| |||||||| | | ||| Sbjct 4139952 ATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTG 4140011 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || || || | ||||| Sbjct 4140012 CCGGTCAGGGTCTTCACAAAGATCTGCAT 4140040 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| || || || ||||| ||||| || || || |||||||| | Sbjct 4139030 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCTTGGA 4139089 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||| ||||| || ||||||||||| ||||| |||||||| | | ||| | Sbjct 4139090 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGC 4139149 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || || || || | ||||| Sbjct 4139150 CGGTTAGGGTCTTCACAAAGATCTGCAT 4139177 >seq4 Length=32292456 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||||| || ||||| || ||||| || ||||| || | ||||| ||| Sbjct 28749741 ACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCG 28749682 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || || || |||||||| || || || || ||||| || Sbjct 28749681 AGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGG 28749622 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| || || || || ||||||| ||||| Sbjct 28749621 ATCTTGGCCTTCACATTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTG 28749562 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 28749561 CCGGTGAGGGTCTTCACGAATATTTGCAT 28749533 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| | |||||||| || || || || ||||| || ||||| | |||||| || Sbjct 28749513 ACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCA 28749454 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| ||||| ||||| || || || ||| Sbjct 28749453 AGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGA 28749394 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || ||||| || || || || || || | ||| | ||||| Sbjct 28749393 ATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTG 28749334 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 28749333 CCAGTGAGGGTCTTAACGAATATCTGCAT 28749305 Score = 107 bits (118), Expect = 4e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | |||||||| || || || || || || ||||| || | || || || Sbjct 28750197 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750138 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||||||||| ||||| || || || || Sbjct 28750137 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750078 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| || || || || ||||| | ||||| Sbjct 28750077 ATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTG 28750018 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 28750017 CCGGTGAGGGTCTTCACGAAGATCTGCAT 28749989 Score = 107 bits (118), Expect = 4e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | |||||||| || || || || || || ||||| || | || || || Sbjct 28750425 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750366 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||||||||| ||||| || || || || Sbjct 28750365 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750306 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| || || || || ||||| | ||||| Sbjct 28750305 ATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTG 28750246 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 28750245 CCGGTGAGGGTCTTCACGAAGATCTGCAT 28750217 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| | |||||||| || || || || || || ||||| || | || || || Sbjct 28749969 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28749910 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||||||||| ||||| || || || || Sbjct 28749909 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28749850 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || || ||||| || || || || | ||| | |||||| Sbjct 28749849 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 28749790 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 28749789 CCAGTAAGGGTCTTCACAAAGATCTGCAT 28749761 >seq1 Length=43445878 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||||| || || | ||| || || Sbjct 9972235 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCC 9972176 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 9972175 AGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGG 9972116 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||||||||| ||||| || || || | |||||| Sbjct 9972115 ATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTC 9972056 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 9972055 CCCGTCAGGGTCTTCACGAAGATCTGCAT 9972027 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||||| || || | ||| || || Sbjct 9981443 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCC 9981384 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 9981383 AGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGG 9981324 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || ||||||||||| ||||| || || || | |||||| Sbjct 9981323 ATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTC 9981264 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 9981263 CCCGTCAGGGTCTTCACGAAGATCTGCAT 9981235 Score = 111 bits (122), Expect = 3e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || ||||| || || || ||||| ||||| || || | || || || Sbjct 21648094 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCC 21648153 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || || || || || ||||| || Sbjct 21648154 AGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGC 21648213 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 | || ||||||||||| || ||||| || ||||| || || || | ||||| Sbjct 21648214 ACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTC 21648273 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 21648274 CCCGTCAGGGTCTTCACGAAGATCTGCAT 21648302 >seq9 Length=22605696 Score = 111 bits (122), Expect = 3e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||||||||| ||||| || ||||| ||||| ||||| || || | ||||||||| Sbjct 12264456 ACCAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCC 12264397 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || ||||| || | || ||||| |||||||| || ||||| ||||| || Sbjct 12264396 AGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCCTG 12264338 Score = 91.5 bits (100), Expect = 3e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || ||||| ||||| ||||| || || | ||||| ||| Sbjct 13618182 ACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCG 13618241 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 |||||||| || |||||||| || || || ||||| || || || ||| Sbjct 13618242 AGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGGGATACCT 13618289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109343882822696