Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 118 7e-22 seq2 107 1e-18 seq5 104 2e-17 seq4 100 2e-16 seq1 100 2e-16 seq8 98.7 6e-16 >seq6 Length=30401905 Score = 118 bits (130), Expect = 7e-22 Identities = 167/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| ||| | || | ||||| ||| |||||||||||||| || || | Sbjct 26902855 CCTCCCCTCAGCCTAAGCACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCC 26902796 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| || |||||||| || || || |||||||| | || Sbjct 26902795 AGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGG 26902736 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTC 34930 | |||||||||||| |||||| || || || | ||||| | ||| | ||| Sbjct 26902735 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT--TGTCGATCGTGTCCGACGACTC 26902680 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||| || ||||| ||||| || | |||||||||||||||||||| Sbjct 26902679 GACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 26902629 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || |||| ||| | || |||| || || || || || ||||| Sbjct 26902591 TCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAAG 26902532 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| | || | ||||||||||| |||||| || || Sbjct 26902531 ATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTCACATCG 26902472 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || |||||| |||| ||| ||||| || || ||||| ||||||||| Sbjct 26902471 TCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACA 26902412 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 26902411 AAGATCTGCAT 26902401 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||||||||| || || | ||| | ||| |||| || Sbjct 26903065 ACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGTCCATCCTCG 26903006 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || || |||||||| | || | |||||||||||| Sbjct 26903005 AGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGG 26902946 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | |||| ||| | |||||| || | || ||||| || Sbjct 26902945 ATCTTCGCCTTCACGTTGTCGATCGTATCAGAAGACTCAACCTCAAGCGTAATGGTCTTG 26902886 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| ||||| |||||||| Sbjct 26902885 CCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857 Score = 102 bits (112), Expect = 5e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 34758 CCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGG 34817 ||||| | ||| | || | ||| | ||| || ||||| ||||| ||||| | ||| Sbjct 27218358 CCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGG 27218299 Query 34818 CTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACC 34877 | || |||| || ||||| || || || || || || || |||||||| | || | Sbjct 27218298 GTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATG 27218239 Query 34878 CCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCG 34937 ||||||||||| ||||| ||||| | || | || || |||||| ||| Sbjct 27218238 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCG 27218179 Query 34938 ACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||| ||||| || || ||||| |||||||||||||||||||| Sbjct 27218178 AGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 27218135 >seq2 Length=36083738 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| ||||| | | || ||| | |||| ||| || ||||| ||||| ||||| | Sbjct 2262745 TTCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 2262804 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | | |||| |||||||| || || ||||| || || || ||||||||| | | Sbjct 2262805 CAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGG 2262864 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | ||||||||||| ||||| |||||| | || | ||| | ||| | Sbjct 2262865 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCA 2262924 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||| || || || |||||||| || ||||||||||| Sbjct 2262925 CCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2262973 Score = 104 bits (114), Expect = 2e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | | |||| |||||||| || || ||||| Sbjct 2262466 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAG 2262525 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| Sbjct 2262526 ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC---- 2262581 Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | | ||||| | ||| || |||||| || | ||| ||||| || || ||||| ||||| Sbjct 2262582 GTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTT 2262641 Query 34967 CACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 2262642 GACAAAGATCTGCATA 2262657 Score = 98.7 bits (108), Expect = 6e-16 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | |||| | | |||| |||||||| || || ||||| Sbjct 2263011 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAG 2263070 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| ||||| || Sbjct 2263071 ATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 2263128 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| ||| || ||| || |||| ||| || || || || || | ||||| Sbjct 2263129 --TGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTT 2263186 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 2263187 CACAAAGATCTGCAT 2263201 >seq5 Length=25164199 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||||||||| ||||| | |||| | || |||| ||| Sbjct 21087699 ACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCC 21087758 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || |||| ||||||||| | || | |||||||| || Sbjct 21087759 AGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGG 21087818 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 |||||| || || | |||| || | ||| || |||||| || | ||| || || Sbjct 21087819 ATCTTCGCCTTCAC----GTTATCAATGGTGTCCGAGCTCTCAACCTCAAGGGTAATAGT 21087874 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||| ||||| ||||| |||||||| Sbjct 21087875 CTTGCCAGTGAGTGTCTTGACAAAAATCTGCAT 21087907 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| | ||| | || |||| || ||||| || || || || Sbjct 21088400 TTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAA 21088459 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||||||||||| ||||| || || Sbjct 21088460 GATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATT 21088519 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || || |||||| || | ||||||||| || || |||||||||||||| Sbjct 21088520 GTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCAC 21088579 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 21088580 AAAGATCTGCAT 21088591 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| ||||| | | || ||| | |||| ||| || ||||| ||||| ||||| | Sbjct 21087907 TTCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 21087966 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| ||| | || |||||||| || || ||||| || || || ||||||||| | | Sbjct 21087967 CGAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCTGGGG 21088026 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | ||||||||||| |||||| |||||| | |||| || | ||| | Sbjct 21088027 GAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGATGACTCGA 21088086 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | || ||||| || || || || |||||||| ||||||||||| Sbjct 21088087 CCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 21088135 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||||||||| | | | || | ||||| ||| || ||||| ||||| ||||| | Sbjct 21088135 TTCCTCCCCTGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 21088194 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 |||| | | |||| || ||||| || || ||||| || || || |||||||| | | Sbjct 21088195 CAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGG 21088254 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | |||||||||||| ||||| || ||| | || | ||| | ||||| Sbjct 21088255 GAATCCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTCAA 21088314 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| || || || || || | ||||| |||||||| ||||| Sbjct 21088315 CCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 21088363 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || ||||| || Sbjct 3097299 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 3097358 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||| |||||||| ||||| || ||| Sbjct 3097359 ATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 3097418 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || ||||| || ||||| || |||||||| Sbjct 3097419 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACG 3097478 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 3097479 AAGATCTGCATCTT 3097492 >seq4 Length=32292456 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||||||||| | |||| | || | || || Sbjct 28749969 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28749910 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || ||||||||| | || | |||||||| || Sbjct 28749909 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28749850 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | |||| ||| || |||||| || | ||| || || || Sbjct 28749849 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 28749790 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || ||||||||||||||||||||| Sbjct 28749789 CCAGTAAGGGTCTTCACAAAGATCTGCATA 28749760 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||||||||| | |||| | || | || || Sbjct 28750197 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750138 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || ||||||||| | || | |||||||| || Sbjct 28750137 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750078 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || || | ||||| || || |||||| || | ||| ||||| Sbjct 28750077 ATCTTGGCCTTCAC--AT--TGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGT 28750022 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| |||||||| |||||||||||| Sbjct 28750021 CTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 28749988 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||||||||| | |||| | || | || || Sbjct 28750425 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750366 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || ||||||||| | || | |||||||| || Sbjct 28750365 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750306 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || || | ||||| || || |||||| || | ||| ||||| Sbjct 28750305 ATCTTGGCCTTCAC--AT--TGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGT 28750250 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| |||||||| |||||||||||| Sbjct 28750249 CTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 28750216 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || || ||||| ||||| | |||| | || |||| || ||||| || || ||||| Sbjct 28749724 TTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAA 28749665 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||||||| | || | ||||||||||| ||||| || || | Sbjct 28749664 GATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC--A 28749607 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| ||| | ||| || || | ||| ||||| || || ||||| |||| Sbjct 28749606 T--TATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCT 28749549 Query 34966 TCACAAAGATCTGCAT 34981 |||| || || ||||| Sbjct 28749548 TCACGAATATTTGCAT 28749533 >seq1 Length=43445878 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || |||||||| || ||||| || Sbjct 21648112 TCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 21648171 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | |||||||||||| | |||| |||||| | Sbjct 21648172 ATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGCACCTTCGCCTTGACG--T 21648229 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || |||| || | | ||| || || | || ||||| || ||||| || ||||||| Sbjct 21648230 TCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 21648289 Query 34969 CAAAGATCTGCAT 34981 | ||||||||||| Sbjct 21648290 CGAAGATCTGCAT 21648302 Score = 98.7 bits (108), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || |||||||| || ||||| || Sbjct 9972217 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAG 9972158 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | |||||||||||| |||||| || ||| Sbjct 9972157 ATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 9972098 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || || || || ||||| || |||||||| Sbjct 9972097 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACG 9972038 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 9972037 AAGATCTGCATCTT 9972024 Score = 98.7 bits (108), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || |||||||| || ||||| || Sbjct 9981425 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAG 9981366 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | |||||||||||| |||||| || ||| Sbjct 9981365 ATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 9981306 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || || | || || || || ||||| || |||||||| Sbjct 9981305 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACG 9981246 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 9981245 AAGATCTGCATCTT 9981232 >seq8 Length=23026653 Score = 98.7 bits (108), Expect = 6e-16 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| | |||| | || | || || ||||| || ||||| || Sbjct 4139850 TCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCGGCGAAG 4139909 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| |||||| || || || Sbjct 4139910 ATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 4139967 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || || | ||| |||| || || || || ||||| Sbjct 4139968 --TGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTCTT 4140025 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 4140026 CACAAAGATCTGCAT 4140040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324595269699264