Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq6 118 7e-22
seq2 107 1e-18
seq5 104 2e-17
seq4 100 2e-16
seq1 100 2e-16
seq8 98.7 6e-16
>seq6
Length=30401905
Score = 118 bits (130), Expect = 7e-22
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|||||||||| ||| | || | ||||| ||| |||||||||||||| || || |
Sbjct 26902855 CCTCCCCTCAGCCTAAGCACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCC 26902796
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
||| | || | || || ||||| || |||||||| || || || |||||||| | ||
Sbjct 26902795 AGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGG 26902736
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTC 34930
| |||||||||||| |||||| || || || | ||||| | ||| | |||
Sbjct 26902735 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT--TGTCGATCGTGTCCGACGACTC 26902680
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| |||| || ||||| ||||| || | ||||||||||||||||||||
Sbjct 26902679 GACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 26902629
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| || |||| ||| | || |||| || || || || || |||||
Sbjct 26902591 TCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAAG 26902532
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || ||||||||||| | || | ||||||||||| |||||| || ||
Sbjct 26902531 ATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTCACATCG 26902472
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| || |||||| |||| ||| ||||| || || ||||| |||||||||
Sbjct 26902471 TCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACA 26902412
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 26902411 AAGATCTGCAT 26902401
Score = 102 bits (112), Expect = 5e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||||||||| || || | ||| | ||| |||| ||
Sbjct 26903065 ACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTGCGTCCATCCTCG 26903006
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || || || |||||||| | || | ||||||||||||
Sbjct 26903005 AGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGG 26902946
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
|||||| || ||| | |||| ||| | |||||| || | || ||||| ||
Sbjct 26902945 ATCTTCGCCTTCACGTTGTCGATCGTATCAGAAGACTCAACCTCAAGCGTAATGGTCTTG 26902886
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || ||||| ||||| ||||||||
Sbjct 26902885 CCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857
Score = 102 bits (112), Expect = 5e-17
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 34758 CCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGG 34817
||||| | ||| | || | ||| | ||| || ||||| ||||| ||||| | |||
Sbjct 27218358 CCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGG 27218299
Query 34818 CTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACC 34877
| || |||| || ||||| || || || || || || || |||||||| | || |
Sbjct 27218298 GTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATG 27218239
Query 34878 CCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCG 34937
||||||||||| ||||| ||||| | || | || || |||||| |||
Sbjct 27218238 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCG 27218179
Query 34938 ACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| ||| ||||| || || ||||| ||||||||||||||||||||
Sbjct 27218178 AGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 27218135
>seq2
Length=36083738
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| ||||| | | || ||| | |||| ||| || ||||| ||||| ||||| |
Sbjct 2262745 TTCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 2262804
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | | |||| |||||||| || || ||||| || || || ||||||||| | |
Sbjct 2262805 CAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGG 2262864
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | ||||||||||| ||||| |||||| | || | ||| | ||| |
Sbjct 2262865 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCA 2262924
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| ||||| || || || |||||||| || |||||||||||
Sbjct 2262925 CCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2262973
Score = 104 bits (114), Expect = 2e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | |||| | | |||| |||||||| || || |||||
Sbjct 2262466 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAG 2262525
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| ||||| |||||
Sbjct 2262526 ATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC---- 2262581
Query 34911 GCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| | ||||| | ||| || |||||| || | ||| ||||| || || ||||| |||||
Sbjct 2262582 GTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTT 2262641
Query 34967 CACAAAGATCTGCATA 34982
|||||||||||||||
Sbjct 2262642 GACAAAGATCTGCATA 2262657
Score = 98.7 bits (108), Expect = 6e-16
Identities = 140/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | |||| | | |||| |||||||| || || |||||
Sbjct 2263011 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAG 2263070
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||||||||||| ||||| ||||| ||
Sbjct 2263071 ATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC--AT 2263128
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| ||| || ||| || |||| ||| || || || || || | |||||
Sbjct 2263129 --TGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTT 2263186
Query 34967 CACAAAGATCTGCAT 34981
|||||||||||||||
Sbjct 2263187 CACAAAGATCTGCAT 2263201
>seq5
Length=25164199
Score = 104 bits (114), Expect = 2e-17
Identities = 153/213 (72%), Gaps = 8/213 (4%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||||||||| ||||| | |||| | || |||| |||
Sbjct 21087699 ACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCC 21087758
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || ||||| || |||| ||||||||| | || | |||||||| ||
Sbjct 21087759 AGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGG 21087818
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948
|||||| || || | |||| || | ||| || |||||| || | ||| || ||
Sbjct 21087819 ATCTTCGCCTTCAC----GTTATCAATGGTGTCCGAGCTCTCAACCTCAAGGGTAATAGT 21087874
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || ||||| ||||| ||||| ||||||||
Sbjct 21087875 CTTGCCAGTGAGTGTCTTGACAAAAATCTGCAT 21087907
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| | ||| | || |||| || ||||| || || || ||
Sbjct 21088400 TTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAA 21088459
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || |||||||| | || | ||||||||||| ||||| || ||
Sbjct 21088460 GATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATT 21088519
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| || | || || |||||| || | ||||||||| || || ||||||||||||||
Sbjct 21088520 GTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCAC 21088579
Query 34970 AAAGATCTGCAT 34981
||||||||||||
Sbjct 21088580 AAAGATCTGCAT 21088591
Score = 102 bits (112), Expect = 5e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| ||||| | | || ||| | |||| ||| || ||||| ||||| ||||| |
Sbjct 21087907 TTCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 21087966
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
||| ||| | || |||||||| || || ||||| || || || ||||||||| | |
Sbjct 21087967 CGAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCTGGGG 21088026
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | ||||||||||| |||||| |||||| | |||| || | ||| |
Sbjct 21088027 GAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCTGATGACTCGA 21088086
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | || ||||| || || || || |||||||| |||||||||||
Sbjct 21088087 CCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 21088135
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||||||||| | | | || | ||||| ||| || ||||| ||||| ||||| |
Sbjct 21088135 TTCCTCCCCTGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 21088194
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| | | |||| || ||||| || || ||||| || || || |||||||| | |
Sbjct 21088195 CAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGG 21088254
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | |||||||||||| ||||| || ||| | || | ||| | |||||
Sbjct 21088255 GAATCCCCTCCTTGTCCTGGATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTCAA 21088314
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| || || || || || | ||||| |||||||| |||||
Sbjct 21088315 CCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 21088363
Score = 84.2 bits (92), Expect = 1e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| | || | || || ||||| || ||||| ||
Sbjct 3097299 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 3097358
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | ||| |||||||| ||||| || |||
Sbjct 3097359 ATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 3097418
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || ||| || || | || ||||| || ||||| || ||||||||
Sbjct 3097419 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACG 3097478
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 3097479 AAGATCTGCATCTT 3097492
>seq4
Length=32292456
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||||||||| | |||| | || | || ||
Sbjct 28749969 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28749910
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || ||||||||| | || | |||||||| ||
Sbjct 28749909 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28749850
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| || || | |||| ||| || |||||| || | ||| || || ||
Sbjct 28749849 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 28749790
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || |||||||||||||||||||||
Sbjct 28749789 CCAGTAAGGGTCTTCACAAAGATCTGCATA 28749760
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||||||||| | |||| | || | || ||
Sbjct 28750197 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750138
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || ||||||||| | || | |||||||| ||
Sbjct 28750137 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750078
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| || || || | ||||| || || |||||| || | ||| |||||
Sbjct 28750077 ATCTTGGCCTTCAC--AT--TGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGT 28750022
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || ||||| |||||||| ||||||||||||
Sbjct 28750021 CTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 28749988
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||| || ||||| ||||||||||| | |||| | || | || ||
Sbjct 28750425 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 28750366
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || ||||||||| | || | |||||||| ||
Sbjct 28750365 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGG 28750306
Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948
||||| || || || | ||||| || || |||||| || | ||| |||||
Sbjct 28750305 ATCTTGGCCTTCAC--AT--TGTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGT 28750250
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || ||||| |||||||| ||||||||||||
Sbjct 28750249 CTTGCCGGTGAGGGTCTTCACGAAGATCTGCATA 28750216
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| || || ||||| ||||| | |||| | || |||| || ||||| || || |||||
Sbjct 28749724 TTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAA 28749665
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || ||||||||| | || | ||||||||||| ||||| || || |
Sbjct 28749664 GATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCAC--A 28749607
Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965
| ||||||| ||| | ||| || || | ||| ||||| || || ||||| ||||
Sbjct 28749606 T--TATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCT 28749549
Query 34966 TCACAAAGATCTGCAT 34981
|||| || || |||||
Sbjct 28749548 TCACGAATATTTGCAT 28749533
>seq1
Length=43445878
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | || | || | || |||||||| || ||||| ||
Sbjct 21648112 TCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 21648171
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| |||| | |||||||||||| | |||| |||||| |
Sbjct 21648172 ATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGCACCTTCGCCTTGACG--T 21648229
Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968
|| |||| || | | ||| || || | || ||||| || ||||| || |||||||
Sbjct 21648230 TCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 21648289
Query 34969 CAAAGATCTGCAT 34981
| |||||||||||
Sbjct 21648290 CGAAGATCTGCAT 21648302
Score = 98.7 bits (108), Expect = 6e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| | || | || |||||||| || ||||| ||
Sbjct 9972217 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAG 9972158
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| |||| | |||||||||||| |||||| || |||
Sbjct 9972157 ATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 9972098
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || ||| || || | || || || || ||||| || ||||||||
Sbjct 9972097 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACG 9972038
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 9972037 AAGATCTGCATCTT 9972024
Score = 98.7 bits (108), Expect = 6e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| | ||| | || | || |||||||| || ||||| ||
Sbjct 9981425 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAG 9981366
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| |||| | |||||||||||| |||||| || |||
Sbjct 9981365 ATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 9981306
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | || || ||| || || | || || || || ||||| || ||||||||
Sbjct 9981305 TCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACG 9981246
Query 34971 AAGATCTGCATATT 34984
||||||||||| ||
Sbjct 9981245 AAGATCTGCATCTT 9981232
>seq8
Length=23026653
Score = 98.7 bits (108), Expect = 6e-16
Identities = 140/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| | |||| | || | || || ||||| || ||||| ||
Sbjct 4139850 TCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCGGCGAAG 4139909
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || |||||||| | || | |||||||||||| |||||| || || ||
Sbjct 4139910 ATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 4139967
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
| ||||| || || ||| || || | ||| |||| || || || || |||||
Sbjct 4139968 --TGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTCTT 4140025
Query 34967 CACAAAGATCTGCAT 34981
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Sbjct 4140026 CACAAAGATCTGCAT 4140040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324595269699264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |