Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_019444.1
Length=176043
Score E
Sequences producing significant alignments: (Bits) Value
seq10 540 1e-148
seq8 540 1e-148
seq7 540 1e-148
seq5 134 2e-26
seq11 91.5 2e-13
seq6 82.4 9e-11
>seq10
Length=17164355
Score = 540 bits (598), Expect = 1e-148
Identities = 714/988 (72%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 162892 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162951
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 162952 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163010
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 163011 CCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAA 163070
|| || || ||||| || || |||||||| || ||||||| | | || || |||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 163071 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 163130
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 163131 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 163190
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 163191 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCG 163250
| |||||| | | || | | |||||||| ||||| |||||||| | ||
Sbjct 15960665 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 15960724
Query 163251 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGC 163310
| |||||||| || ||||| ||| ||||| || || ||||||||||| || ||||
Sbjct 15960725 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 15960784
Query 163311 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 163370
|| ||| || | || ||| | |||||||| ||||||||| | ||||| | || ||
Sbjct 15960785 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 15960844
Query 163371 CTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 163430
||||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| ||
Sbjct 15960845 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 15960904
Query 163431 CTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGG 163490
|| || ||||| || || |||||||| ||||| || || || ||| || ||||||||
Sbjct 15960905 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 15960964
Query 163491 CAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGG 163550
| || |||||| | || | || || ||||||| || || || | ||
Sbjct 15960965 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 15961024
Query 163551 TTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 163610
||||| ||||||||||| |||||||| || || || || || || ||||| || || ||
Sbjct 15961025 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 15961084
Query 163611 TCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGC 163670
|| || |||||||||||||| || |||||| | | | ||||||||| ||||
Sbjct 15961085 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 15961144
Query 163671 AGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAA 163730
|| |||||||| || || || ||||| ||||| | || | || || ||||| |||||
Sbjct 15961145 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 15961204
Query 163731 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACAC 163790
|| ||||| ||||| |||||||| || | ||||| | || ||||| || | || ||
Sbjct 15961205 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 15961264
Query 163791 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 163850
|||||| || | | ||||| ||| ||| ||||||||||| ||||| || ||||| ||
Sbjct 15961265 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 15961324
Query 163851 ACACAACTTCCCACTCGATCTTGCTGCT 163878
||||||||||| || || || ||||||
Sbjct 15961325 TCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 540 bits (598), Expect = 1e-148
Identities = 714/988 (72%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 162892 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162951
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 162952 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163010
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 163011 CCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAA 163070
|| || || ||||| || || |||||||| || ||||||| | | || || |||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 163071 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 163130
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 163131 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 163190
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 163191 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCG 163250
| |||||| | | || | | |||||||| ||||| |||||||| | ||
Sbjct 17290755 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 17290814
Query 163251 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGC 163310
| |||||||| || ||||| ||| ||||| || || ||||||||||| || ||||
Sbjct 17290815 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 17290874
Query 163311 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 163370
|| ||| || | || ||| | |||||||| ||||||||| | ||||| | || ||
Sbjct 17290875 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 17290934
Query 163371 CTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 163430
||||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| ||
Sbjct 17290935 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 17290994
Query 163431 CTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGG 163490
|| || ||||| || || |||||||| ||||| || || || ||| || ||||||||
Sbjct 17290995 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 17291054
Query 163491 CAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGG 163550
| || |||||| | || | || || ||||||| || || || | ||
Sbjct 17291055 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 17291114
Query 163551 TTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 163610
||||| ||||||||||| |||||||| || || || || || || ||||| || || ||
Sbjct 17291115 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 17291174
Query 163611 TCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGC 163670
|| || |||||||||||||| || |||||| | | | ||||||||| ||||
Sbjct 17291175 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 17291234
Query 163671 AGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAA 163730
|| |||||||| || || || ||||| ||||| | || | || || ||||| |||||
Sbjct 17291235 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 17291294
Query 163731 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACAC 163790
|| ||||| ||||| |||||||| || | ||||| | || ||||| || | || ||
Sbjct 17291295 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 17291354
Query 163791 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 163850
|||||| || | | ||||| ||| ||| ||||||||||| ||||| || ||||| ||
Sbjct 17291355 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 17291414
Query 163851 ACACAACTTCCCACTCGATCTTGCTGCT 163878
||||||||||| || || || ||||||
Sbjct 17291415 TCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 538 bits (596), Expect = 4e-148
Identities = 725/1007 (72%), Gaps = 2/1007 (0%)
Strand=Plus/Minus
Query 164619 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGATTACTACTTCTT 164678
|| |||||| | | | || || ||||||||||| || |||||||| || | ||| ||
Sbjct 17282597 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 17282538
Query 164679 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTTGG 164738
|| ||||||| | || | || |||||| |||| || ||| ||||||| || ||||
Sbjct 17282537 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 17282478
Query 164739 TACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTCACAGCAGCTGTC 164798
|| |||||||| | || ||||||| | |||||| || || | || ||||| ||
Sbjct 17282477 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTAACCGCAGCAGTT 17282418
Query 164799 TCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 164858
|| || ||||| || | | | || ||| | | ||||| ||||| || || | ||
Sbjct 17282417 TCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCACAA 17282358
Query 164859 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGT 164918
||| |||| || ||||| ||| | || || || |||| ||| || |||||||| ||
Sbjct 17282357 GGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGG 17282298
Query 164919 GCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCTGGCACG-TCTCATTGGTAT 164977
|| || || ||||| ||||||||| | || || ||||| || || || ||| | | |
Sbjct 17282297 GCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-T 17282239
Query 164978 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 165037
|| ||||| ||||| ||| | |||||||| || || ||||||||||| ||| |||||
Sbjct 17282238 GCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCT 17282179
Query 165038 TATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 165097
|| || |||||||| || ||| ||||||| || || ||| ||||| || ||||| ||
Sbjct 17282178 GATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 17282119
Query 165098 CTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATAT 165157
||| ||||| | | ||| | |||||||| || || ||||| | ||||| || |||||
Sbjct 17282118 ATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATAT 17282059
Query 165158 GATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGT 165217
|||||| ||||| || | || || | || |||||| ||||||||||| | || ||
Sbjct 17282058 GATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACCGT 17281999
Query 165218 TGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGAC 165277
||||| || ||| ||||| || || ||||||||||| || ||| | | ||
Sbjct 17281998 GGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCAAC 17281939
Query 165278 ACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 165337
|| | ||||| |||||||| |||||||| || || ||||| ||||| || ||||| ||
Sbjct 17281938 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGG 17281879
Query 165338 CATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGG 165397
|||| ||||| || || || ||| | ||||| || ||| | ||||| || || | ||
Sbjct 17281878 TGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACCGG 17281819
Query 165398 TCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTT 165457
| | |||| |||||||| | | || || ||||| ||||| ||||| || || ||
Sbjct 17281818 TTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGACTT 17281759
Query 165458 CGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 165517
||| ||||| ||| | ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 17281758 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 17281699
Query 165518 CATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAAAA 165577
|| || || || || || | ||||| ||| ||||| || ||||| || ||||||||
Sbjct 17281698 TATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAA 17281639
Query 165578 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 165624
|||| ||||| || || || | || | || ||||| |||||||
Sbjct 17281638 TCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 17281592
Score = 93.3 bits (102), Expect = 5e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 163549 GGTTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTC 163608
|||||||| ||||||||||| |||||||| || || || | || || ||||| || ||
Sbjct 13113499 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTT 13113558
Query 163609 GGTCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTG 163668
|| || || |||||||||||||| || |||||| | | | ||||| ||| ||
Sbjct 13113559 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTG 13113618
Query 163669 GCAGCATGGCCTGTCGTCGGAATCTGGTT 163697
|| || |||| ||| || || || |||||
Sbjct 13113619 GCTGCTTGGCATGTAGTAGGGATTTGGTT 13113647
>seq7
Length=26479886
Score = 540 bits (598), Expect = 1e-148
Identities = 714/988 (72%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 162892 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162951
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 162952 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163010
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 163011 CCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAA 163070
|| || || ||||| || || |||||||| || ||||||| | | || || |||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 163071 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 163130
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 163131 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 163190
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 163191 CTTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCG 163250
| |||||| | | || | | |||||||| ||||| |||||||| | ||
Sbjct 22562484 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 22562543
Query 163251 CTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGC 163310
| |||||||| || ||||| ||| ||||| || || ||||||||||| || ||||
Sbjct 22562544 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 22562603
Query 163311 AGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 163370
|| ||| || | || ||| | |||||||| ||||||||| | ||||| | || ||
Sbjct 22562604 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 22562663
Query 163371 CTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 163430
||||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| ||
Sbjct 22562664 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 22562723
Query 163431 CTTCCATATGTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGG 163490
|| || ||||| || || |||||||| ||||| || || || ||| || ||||||||
Sbjct 22562724 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 22562783
Query 163491 CAGTCTTGTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGG 163550
| || |||||| | || | || || ||||||| || || || | ||
Sbjct 22562784 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 22562843
Query 163551 TTACAAGTTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 163610
||||| ||||||||||| |||||||| || || || || || || ||||| || || ||
Sbjct 22562844 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 22562903
Query 163611 TCGTTTGATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGC 163670
|| || |||||||||||||| || |||||| | | | ||||||||| ||||
Sbjct 22562904 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 22562963
Query 163671 AGCATGGCCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAA 163730
|| |||||||| || || || ||||| ||||| | || | || || ||||| |||||
Sbjct 22562964 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 22563023
Query 163731 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACAC 163790
|| ||||| ||||| |||||||| || | ||||| | || ||||| || | || ||
Sbjct 22563024 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 22563083
Query 163791 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 163850
|||||| || | | ||||| ||| ||| ||||||||||| ||||| || ||||| ||
Sbjct 22563084 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 22563143
Query 163851 ACACAACTTCCCACTCGATCTTGCTGCT 163878
||||||||||| || || || ||||||
Sbjct 22563144 TCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 154 bits (170), Expect = 2e-32
Identities = 208/287 (72%), Gaps = 2/287 (1%)
Strand=Plus/Plus
Query 162892 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162951
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 162952 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 163010
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 163011 CCCTGTGGACATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAA 163070
|| || || ||||| | || |||| || || ||||||| | | || || |||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 163071 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 163130
|| ||||||||||| || |||| |||| || || || | |||| || || ||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 163131 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 163177
|||||||| ||||| ||||||||||| | || || || |||||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146
>seq5
Length=25164199
Score = 134 bits (148), Expect = 2e-26
Identities = 182/254 (72%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 165249 GCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACT 165308
||||||||||| || ||| | | || || | ||||| |||||||| || |||||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 165309 GCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCAT 165368
|| || ||||| ||||| || ||||| || |||| ||||| || || || ||| | |||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 165369 TTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGT 165428
|| || ||| | ||||| || || | ||| |||| |||||||| | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 165429 CTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGAT 165488
|| ||||| ||||| ||||| || || ||||| ||| | ||| | |||| ||||||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 165489 CCAGAATTTGAGAC 165502
|| |||||||||||
Sbjct 21599375 CCTGAATTTGAGAC 21599388
>seq11
Length=21200727
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 165492 GAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTACGTGCTTGGTTG 165551
||||| ||||| |||||||||||||| || || || || || || | ||||| ||| ||
Sbjct 11535661 GAATTGGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATG 11535602
Query 165552 GCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGC 165611
||| || ||||| || |||||||| |||| ||||| || || || | || | ||
Sbjct 11535601 GCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGA 11535542
Query 165612 AACGCCCTTTAAT 165624
||||| |||||||
Sbjct 11535541 AACGCTCTTTAAT 11535529
>seq6
Length=30401905
Score = 82.4 bits (90), Expect = 9e-11
Identities = 120/170 (71%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 165429 CTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGAT 165488
|| ||||| ||| | |||| || || ||||| || || | | | ||||||||| ||
Sbjct 9625634 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAGAACAT 9625693
Query 165489 CCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTACGTGCTTGG 165548
|| ||||||||||| |||| ||||||||| || || || || || | | ||||| |||
Sbjct 9625694 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 9625753
Query 165549 TTGGCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGT 165598
|| | || |||| || |||||| |||| ||||| || || ||
Sbjct 9625754 ATGATAACTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGT 9625803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563141395317440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |