Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_020486.1
Length=171211
Score E
Sequences producing significant alignments: (Bits) Value
seq10 652 0.0
seq8 652 0.0
seq7 652 0.0
seq5 150 2e-31
seq3 114 1e-20
>seq10
Length=17164355
Score = 652 bits (722), Expect = 0.0
Identities = 739/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935
|| || |||||| | || |||||||| ||||| ||||| | || |||||||| || ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCC 160994
||||| || ||| | | || || | ||| || || || |||||| | | ||| ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054
|| || || || || || |||||||| || || ||||||| | | || ||||||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114
|| ||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| ||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174
|||||||| ||| | | || || ||| | ||||| || ||||||| | || ||||
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 161175 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 161234
| |||||| | |||| | | ||| |||||||||||||||||||| || |||
Sbjct 15960665 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 15960724
Query 161235 TCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 161294
|||||| ||||||||||||||| || ||||| || |||||||| || || || | ||
Sbjct 15960725 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 15960784
Query 161295 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 161354
|| ||| || | || ||| | |||||||| ||||||||||| |||||| | || ||
Sbjct 15960785 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 15960844
Query 161355 CTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCC 161414
|||||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||| ||
Sbjct 15960845 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 15960904
Query 161415 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 161474
|| || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| ||
Sbjct 15960905 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 15960964
Query 161475 TTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGG 161534
||| |||| |||||| || | | |||||||| |||||||| || || | ||
Sbjct 15960965 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 15961024
Query 161535 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGG 161594
||||| || |||||||| |||||||| || || || || || || || || || || ||
Sbjct 15961025 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 15961084
Query 161595 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGC 161654
|| | || |||||||| ||| || |||||||| || || | ||||||||| | ||
Sbjct 15961085 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 15961144
Query 161655 TGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 161714
|||||||||||| || || || ||||||||||| | || | || || ||||| |||||
Sbjct 15961145 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 15961204
Query 161715 CCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACAC 161774
|| || || ||||| |||||||| ||| | |||||||| || ||| ||||| || ||
Sbjct 15961205 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 15961264
Query 161775 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGC 161834
||||| || | ||||||||||| |||||| |||||||| |||||||| || |||||
Sbjct 15961265 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 15961324
Query 161835 TCACAACTTCCCTCTTGACCTTGCTGCT 161862
||||||||||||||| ||||| ||||||
Sbjct 15961325 TCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 652 bits (722), Expect = 0.0
Identities = 739/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935
|| || |||||| | || |||||||| ||||| ||||| | || |||||||| || ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCC 160994
||||| || ||| | | || || | ||| || || || |||||| | | ||| ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054
|| || || || || || |||||||| || || ||||||| | | || ||||||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114
|| ||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| ||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174
|||||||| ||| | | || || ||| | ||||| || ||||||| | || ||||
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 161175 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 161234
| |||||| | |||| | | ||| |||||||||||||||||||| || |||
Sbjct 17290755 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 17290814
Query 161235 TCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 161294
|||||| ||||||||||||||| || ||||| || |||||||| || || || | ||
Sbjct 17290815 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 17290874
Query 161295 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 161354
|| ||| || | || ||| | |||||||| ||||||||||| |||||| | || ||
Sbjct 17290875 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 17290934
Query 161355 CTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCC 161414
|||||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||| ||
Sbjct 17290935 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 17290994
Query 161415 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 161474
|| || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| ||
Sbjct 17290995 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 17291054
Query 161475 TTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGG 161534
||| |||| |||||| || | | |||||||| |||||||| || || | ||
Sbjct 17291055 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 17291114
Query 161535 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGG 161594
||||| || |||||||| |||||||| || || || || || || || || || || ||
Sbjct 17291115 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 17291174
Query 161595 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGC 161654
|| | || |||||||| ||| || |||||||| || || | ||||||||| | ||
Sbjct 17291175 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 17291234
Query 161655 TGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 161714
|||||||||||| || || || ||||||||||| | || | || || ||||| |||||
Sbjct 17291235 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 17291294
Query 161715 CCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACAC 161774
|| || || ||||| |||||||| ||| | |||||||| || ||| ||||| || ||
Sbjct 17291295 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 17291354
Query 161775 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGC 161834
||||| || | ||||||||||| |||||| |||||||| |||||||| || |||||
Sbjct 17291355 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 17291414
Query 161835 TCACAACTTCCCTCTTGACCTTGCTGCT 161862
||||||||||||||| ||||| ||||||
Sbjct 17291415 TCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 571 bits (632), Expect = 6e-158
Identities = 740/1016 (73%), Gaps = 6/1016 (1%)
Strand=Plus/Minus
Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176
|||||| | | ||||||||| | ||| |||||||| |||||||| || ||||||||
Sbjct 17282609 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17282550
Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236
|| | |||||||| ||||||| | ||| | || |||||| |||| ||||| |||||
Sbjct 17282549 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17282490
Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCT 162295
|| || ||||||||| || ||| | |||||||||||| | || ||| |||| |||||
Sbjct 17282489 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCT 17282432
Query 162296 TA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGG 162354
|| | || |||||||| || || || | | | | || ||| | |||| |||||||
Sbjct 17282431 TAACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGG 17282372
Query 162355 GTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTG 162414
| || || | |||||||| || | || ||||| ||| | || || || ||||||||||
Sbjct 17282371 GCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 17282312
Query 162415 TGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 162474
| || ||||| || || |||||||| |||||||||||| | || || |||||||| || |
Sbjct 17282311 TTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 17282252
Query 162475 GA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTC 162533
| || || | | || ||||| ||||| ||| | ||||| || || || ||||| ||
Sbjct 17282251 GGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTT 17282193
Query 162534 GTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTC 162593
||| || || || || ||||| |||| ||||| |||||||| || ||| ||
Sbjct 17282192 GTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTT 17282133
Query 162594 GGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTA 162653
|| || ||||| || || |||||| | |||||| ||||||| || ||||| |||||| |
Sbjct 17282132 GGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTG 17282073
Query 162654 AATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATT 162713
|| || ||||| |||||||| || || || | | || | || |||| | ||||||
Sbjct 17282072 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATT 17282013
Query 162714 CATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAA 162773
||||| | || || ||||| || || | || || || || ||||| || ||
Sbjct 17282012 CATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGC 17281953
Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGG 162833
|| ||| || | || || | |||||||| ||||| ||||| || || || ||||| |||
Sbjct 17281952 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGG 17281893
Query 162834 TCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTT 162893
|| || || || ||| |||||||| || || |||||||| |||||||||||||| |||
Sbjct 17281892 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 17281833
Query 162894 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTT 162953
|| || |||| ||| | |||| ||| |||| || | | || || ||||| || ||
Sbjct 17281832 GTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTA 17281773
Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013
||||| || ||||| || || || ||| | ||||| || ||||| ||||| ||||||||
Sbjct 17281772 CGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 17281713
Query 163014 TTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGAC 163073
||||| || || || |||||| | || || || |||| || ||| | ||| | |||
Sbjct 17281712 TTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGAT 17281653
Query 163074 CAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129
|| |||||||| || || | |||||||| ||||| | ||| | || ||||||||
Sbjct 17281652 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597
>seq7
Length=26479886
Score = 652 bits (722), Expect = 0.0
Identities = 739/988 (75%), Gaps = 2/988 (0%)
Strand=Plus/Plus
Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935
|| || |||||| | || |||||||| ||||| ||||| | || |||||||| || ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCC 160994
||||| || ||| | | || || | ||| || || || |||||| | | ||| ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054
|| || || || || || |||||||| || || ||||||| | | || ||||||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114
|| ||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| ||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174
|||||||| ||| | | || || ||| | ||||| || ||||||| | || ||||
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 161175 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 161234
| |||||| | |||| | | ||| |||||||||||||||||||| || |||
Sbjct 22562484 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 22562543
Query 161235 TCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 161294
|||||| ||||||||||||||| || ||||| || |||||||| || || || | ||
Sbjct 22562544 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 22562603
Query 161295 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 161354
|| ||| || | || ||| | |||||||| ||||||||||| |||||| | || ||
Sbjct 22562604 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 22562663
Query 161355 CTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCC 161414
|||||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||| ||
Sbjct 22562664 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 22562723
Query 161415 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 161474
|| || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| ||
Sbjct 22562724 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 22562783
Query 161475 TTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGG 161534
||| |||| |||||| || | | |||||||| |||||||| || || | ||
Sbjct 22562784 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 22562843
Query 161535 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGG 161594
||||| || |||||||| |||||||| || || || || || || || || || || ||
Sbjct 22562844 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 22562903
Query 161595 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGC 161654
|| | || |||||||| ||| || |||||||| || || | ||||||||| | ||
Sbjct 22562904 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 22562963
Query 161655 TGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 161714
|||||||||||| || || || ||||||||||| | || | || || ||||| |||||
Sbjct 22562964 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 22563023
Query 161715 CCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACAC 161774
|| || || ||||| |||||||| ||| | |||||||| || ||| ||||| || ||
Sbjct 22563024 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 22563083
Query 161775 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGC 161834
||||| || | ||||||||||| |||||| |||||||| |||||||| || |||||
Sbjct 22563084 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 22563143
Query 161835 TCACAACTTCCCTCTTGACCTTGCTGCT 161862
||||||||||||||| ||||| ||||||
Sbjct 22563144 TCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 141 bits (156), Expect = 1e-28
Identities = 219/310 (71%), Gaps = 2/310 (1%)
Strand=Plus/Plus
Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935
|| || |||||| | || |||||||| ||||| ||||| | || |||||||| || ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCC 160994
||||| || ||| | | || || | ||| || || || |||||| | | ||| ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054
|| || || || || | ||||||| | || ||||||| | | || ||||||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114
|| ||||||||||| |||| ||| ||||| || ||||| || |||| ||||| ||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174
|||||||| ||| | | || || ||| | ||||| || ||||||| | || ||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562159
Query 161175 GTTCCACTTC 161184
| ||||||
Sbjct 22562160 TCTACACTTC 22562169
>seq5
Length=25164199
Score = 150 bits (166), Expect = 2e-31
Identities = 178/241 (74%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGG 162833
|| ||| || | || || | |||||||| ||||| || || || || || ||||| |||
Sbjct 21599150 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACCGCTAATCGCTTTTGG 21599209
Query 162834 TCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTT 162893
|| || || || ||| |||||||| || || |||||||| |||||||||||||| |||
Sbjct 21599210 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 21599269
Query 162894 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTT 162953
|| || |||| ||| |||| ||| |||| || | | || || ||||| || ||
Sbjct 21599270 GTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGCCTGGCTCTGAACCTA 21599329
Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013
||||| || ||||| || || || || | ||||| | ||||| ||||| |||||||||
Sbjct 21599330 CGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGATCCTGAATTTGAGACG 21599389
Query 163014 T 163014
|
Sbjct 21599390 T 21599390
>seq3
Length=46202548
Score = 114 bits (126), Expect = 1e-20
Identities = 127/168 (76%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 161674 ATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTC 161733
|| ||||||||||| | || | || || ||||| ||||| || || || ||||| |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 161734 AACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAAC 161793
||||| ||| | |||||||| || ||| ||||| | || ||||| || | |||||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 161794 CGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAAC 161841
||||| ||||| |||||||| |||||||| || ||||||||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750
||| |||||||||||||||||||||| ||| |||||| ||| | ||| ||||||| |||
Sbjct 13466249 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACAGGTTCAAAT 13466308
Query 157751 CCTGTCACCCCGACTTAT 157768
||||||| ||| || |||
Sbjct 13466309 CCTGTCATCCCTACCTAT 13466326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547680867814080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |