Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq8 583 1e-161
seq10 563 1e-155
seq7 560 1e-154
seq5 156 5e-33
seq3 111 2e-19
>seq8
Length=23026653
Score = 583 bits (646), Expect = 1e-161
Identities = 737/1013 (73%), Gaps = 0/1013 (0%)
Strand=Plus/Plus
Query 101710 AGAGCGTTGCCTCTTGGCAATACCTCTTCAGGAAATACAAAGTTTTCATGCGGTTGATCG 101769
|||||||| || | ||| | ||||| ||||| |||| || |||||||| || |||||
Sbjct 17281597 AGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 17281656
Query 101770 ACTGGTGCCAACCATGCACGTAGACCTTCATTCAATAGGATGTTCTTTGTGTAGAACGTC 101829
| ||||| ||| ||||| | ||| || || || || || || || |||||||| |||
Sbjct 17281657 TGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 17281716
Query 101830 TCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGG 101889
|| || || |||||||| ||||| | ||| || ||||| || |||||||| ||||| |||
Sbjct 17281717 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACGTAGG 17281776
Query 101890 TTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAG 101949
|| ||||| || || | | || || | ||| |||| | ||| | || || |||||
Sbjct 17281777 TTCAGAGCCAGGCCGACTACGCCAATAGCACTCATCCATAAACCGGTGACCGGTACAAAT 17281836
Query 101950 AGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAG 102009
|||||||||||||| ||||| | ||||| ||| |||| |||||||||||| |||||
Sbjct 17281837 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 17281896
Query 102010 AAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTG 102069
|| || || || || |||||||||||||| ||||| |||| || | | || || |
Sbjct 17281897 AAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCGCGG 17281956
Query 102070 AAAGTGTTTGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATT 102129
|| || ||||| |||||| || ||| | |||||||| ||||| || | || || ||
Sbjct 17281957 AAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTTTCCACGGTTGCCCCATGAATA 17282016
Query 102130 GCTGACAGCAGTGCTCCTCCCAGGATACCTGCAACACCCATCATATGGAATGGGTTGAGC 102189
|| | ||||| || | || | | || ||||| ||||||||||| |||||||| | |
Sbjct 17282017 GCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 17282076
Query 102190 GTCCAGTTATGGAAGCCCTGTAGGAAGAGTAGGAATCTAAATATCGCTGCAACACCAAAC 102249
||||| ||||| || || || | |||||| | ||||| |||||||||||| || |||||
Sbjct 17282077 GTCCAATTATGAAATCCTTGGAAGAAGAGGATGAATCGAAATATCGCTGCTACGCCAAAA 17282136
Query 102250 GAGGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATAGATGAGAAACACACTGACAAAA 102309
|||||||||||||||| ||| || || || ||||| || || || || ||||||
Sbjct 17282137 CTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGGATAAATCAGGAATACGGAAACAAAA 17282196
Query 102310 ACAGCGATAGGCCCAGAGAACGCAATAGCATTGTACGGACGAATTCCAATTAACCTAGCC 102369
|||||||| || |||||||| | ||| ||||| || || || | | || ||| |||
Sbjct 17282197 ACAGCGATTGGGCCAGAGAATGAAATTGCATTATAAGGCCGCAATTGAACAGACCGAGCA 17282256
Query 102370 AACTCGAATTGACGAAGCATGAAACCAATGAGGGCAAATGCACCGTGGAGAGCCACAAAA 102429
| || |||||||| | ||||||||| || || ||||| || || |||||||| ||||||
Sbjct 17282257 AGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCAACAAAA 17282316
Query 102430 GCCCAGAGTCCCCCAAGTTGGACCCACCTGACGAAATCTCCTTGAGCTTCAGGACCCCAA 102489
| ||| || || || | ||| ||| | ||||| ||||| ||||| || |||||
Sbjct 17282317 GTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGTGCTTCCGGGCCCCAT 17282376
Query 102490 AGTAGAAGAAGAGAATGACCCATAGAGTCAGCAGGCGTTGACACAGCAGCTGTAAGGAAA 102549
||||| | | ||| || | | | | ||||| || || || || || || | ||||
Sbjct 17282377 AGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGGGTGGAAACTGCTGCGGTTAAGAAA 17282436
Query 102550 TTAGCACCTTCAAGGTAACTAGACGCAAGCCCGTGGGTATACCAGGAAGTAGCAAACGTC 102609
|| |||||| | || | ||| | || ||||||||||| ||||| |||| ||
Sbjct 17282437 TTGCAACCTTCCAAATAGGAACTCGCCAATCCATGGGTATACCAAGAAGTTACAAAAGTT 17282496
Query 102610 GTGCCAGTAAGCCAGCCCCCAATTGCGAGATAAGCAGTGGGAAAAAGAAGTAGTCCAGAC 102669
|| || |||| ||| || || | |||| ||||||| |||||||| | ||| ||||||
Sbjct 17282497 GTCCCTGTAAACCAACCTCCTAAAGCGAAATAAGCACAAGGAAAAAGCAATAGGCCAGAC 17282556
Query 102670 CAACCCACAAAGACAAAGCGATCTCGTTTAATCCAGTCATCCAGGATGTCAAA 102722
|| || ||||| ||||| || || | | | |||||| |||| || |||||
Sbjct 17282557 CATCCTACAAAAACAAAACGGTCCCTTCGTAACCAGTCGTCCATAATATCAAA 17282609
Score = 563 bits (624), Expect = 1e-155
Identities = 728/1008 (72%), Gaps = 5/1008 (0%)
Strand=Plus/Minus
Query 103171 AGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAG 103230
|||||| ||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||
Sbjct 17291442 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 17291383
Query 103231 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGAT 103290
| ||| ||||||| | || ||||| || || | || ||||| || | ||||| |
Sbjct 17291382 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 17291323
Query 103291 GGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGT 103350
|| |||||||| ||||||||||| || ||||| ||||| || |||| ||| | || ||
Sbjct 17291322 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 17291263
Query 103351 GAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTT 103410
|||||| || || ||||| || | ||||||||
Sbjct 17291262 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 17291203
Query 103411 GAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTA 103470
|| || ||||||||||| || || || || |||||||||||||| || || || ||
Sbjct 17291202 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 17291143
Query 103471 TGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTC 103530
|||||||||||||| || || ||||||| | || |||||| ||||||| || ||
Sbjct 17291142 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 17291083
Query 103531 AC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGA 103589
| || | | | || || |||| ||||| |||||||||||||| || ||||| ||||
Sbjct 17291082 CCTGATCAAACTAGAGGTTACCAAG-GAACCATGCATAGCACTGAATAGGGAACCGCCGA 17291024
Query 103590 AGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGA 103649
| || ||||| || || | |||||| || || ||||| || |||||||| || || ||||
Sbjct 17291023 ATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGA 17290964
Query 103650 AGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAAC 103709
| || | ||| ||||||| || || || || || ||||||||| |||| ||||| |
Sbjct 17290963 ATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTC 17290904
Query 103710 CTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATG 103769
||||||||| ||||| | |||||| || |||| ||||| ||||||||||| || ||||
Sbjct 17290903 CTTGACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATG 17290844
Query 103770 CGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATAT 103829
| ||| ||||| || ||||| ||||||||| | || |||||||||||| |||||||
Sbjct 17290843 CAACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATAT 17290784
Query 103830 ATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACA 103889
| | | |||| | |||||| | || | || | ||||||| || || || |
Sbjct 17290783 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 17290724
Query 103890 GCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGG 103949
||||||||||| |||||| ||||||||||| || || ||||| | || || || |
Sbjct 17290723 ACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAG 17290664
Query 103950 AGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGG 104009
| | |||| || ||||||||||| || ||||| ||||| | | ||||||| || |
Sbjct 17290663 AAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAG 17290604
Query 104010 GTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAG 104068
| |||||||| || || ||||| || ||||| || || | ||| || | || || |||
Sbjct 17290603 GCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAG 17290544
Query 104069 ATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGG 104128
| ||||| | ||| | || |||||||||| ||||||||||| || | || ||||||
Sbjct 17290543 A-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGG 17290485
Query 104129 TTGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCACGAGGATTGT 104176
|| | || || | ||| | ||||||| | ||||| ||| ||||
Sbjct 17290484 TTTTCGGTGCTAGTTATCCAGTTGCAGAAGCGACCCCAC-AGGCTTGT 17290438
Score = 96.9 bits (106), Expect = 4e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 103403 GAGTTGTTGAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACG 103462
|||||||| || || ||||||||||| || || || || |||||||||||||| |
Sbjct 13113596 GAGTTGTTAAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCATA 13113537
Query 103463 ATGTTGTATGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCA 103522
|| || || |||||||||||||| || || |||||||| | || |||||| |||||
Sbjct 13113536 ATATTATAAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCGTTTTCA 13113477
Query 103523 GTCGTCTC 103530
|| || ||
Sbjct 13113476 GTGGTTTC 13113469
>seq10
Length=17164355
Score = 563 bits (624), Expect = 1e-155
Identities = 728/1008 (72%), Gaps = 5/1008 (0%)
Strand=Plus/Minus
Query 103171 AGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAG 103230
|||||| ||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||
Sbjct 15961352 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 15961293
Query 103231 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGAT 103290
| ||| ||||||| | || ||||| || || | || ||||| || | ||||| |
Sbjct 15961292 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 15961233
Query 103291 GGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGT 103350
|| |||||||| ||||||||||| || ||||| ||||| || |||| ||| | || ||
Sbjct 15961232 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 15961173
Query 103351 GAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTT 103410
|||||| || || ||||| || | ||||||||
Sbjct 15961172 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 15961113
Query 103411 GAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTA 103470
|| || ||||||||||| || || || || |||||||||||||| || || || ||
Sbjct 15961112 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 15961053
Query 103471 TGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTC 103530
|||||||||||||| || || ||||||| | || |||||| ||||||| || ||
Sbjct 15961052 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 15960993
Query 103531 AC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGA 103589
| || | | | || || |||| ||||| |||||||||||||| || ||||| ||||
Sbjct 15960992 CCTGATCAAACTAGAGGTTACCAAG-GAACCATGCATAGCACTGAATAGGGAACCGCCGA 15960934
Query 103590 AGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGA 103649
| || ||||| || || | |||||| || || ||||| || |||||||| || || ||||
Sbjct 15960933 ATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGA 15960874
Query 103650 AGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAAC 103709
| || | ||| ||||||| || || || || || ||||||||| |||| ||||| |
Sbjct 15960873 ATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTC 15960814
Query 103710 CTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATG 103769
||||||||| ||||| | |||||| || |||| ||||| ||||||||||| || ||||
Sbjct 15960813 CTTGACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATG 15960754
Query 103770 CGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATAT 103829
| ||| ||||| || ||||| ||||||||| | || |||||||||||| |||||||
Sbjct 15960753 CAACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATAT 15960694
Query 103830 ATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACA 103889
| | | |||| | |||||| | || | || | ||||||| || || || |
Sbjct 15960693 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 15960634
Query 103890 GCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGG 103949
||||||||||| |||||| ||||||||||| || || ||||| | || || || |
Sbjct 15960633 ACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAG 15960574
Query 103950 AGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGG 104009
| | |||| || ||||||||||| || ||||| ||||| | | ||||||| || |
Sbjct 15960573 AAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAG 15960514
Query 104010 GTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAG 104068
| |||||||| || || ||||| || ||||| || || | ||| || | || || |||
Sbjct 15960513 GCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAG 15960454
Query 104069 ATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGG 104128
| ||||| | ||| | || |||||||||| ||||||||||| || | || ||||||
Sbjct 15960453 A-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGG 15960395
Query 104129 TTGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCACGAGGATTGT 104176
|| | || || | ||| | ||||||| | ||||| ||| ||||
Sbjct 15960394 TTTTCGGTGCTAGTTATCCAGTTGCAGAAGCGACCCCAC-AGGCTTGT 15960348
>seq7
Length=26479886
Score = 560 bits (620), Expect = 1e-154
Identities = 721/999 (72%), Gaps = 4/999 (0%)
Strand=Plus/Minus
Query 103171 AGCAGCAAGGTCAAGGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAG 103230
|||||| ||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||
Sbjct 22563171 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 22563112
Query 103231 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGAT 103290
| ||| ||||||| | || ||||| || || | || ||||| || | ||||| |
Sbjct 22563111 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 22563052
Query 103291 GGACTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGT 103350
|| |||||||| ||||||||||| || ||||| ||||| || |||| ||| | || ||
Sbjct 22563051 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 22562992
Query 103351 GAACCAGATACCCACTACTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGTTGTT 103410
|||||| || || ||||| || | ||||||||
Sbjct 22562991 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 22562932
Query 103411 GAATGATGCGTATTGGAAGATCAAACGACCGAAGTAACCATGAGCGGCTACGATGTTGTA 103470
|| || ||||||||||| || || || || |||||||||||||| || || || ||
Sbjct 22562931 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 22562872
Query 103471 TGTCTCTTCCTCTTGTCCGAACTTGTAACCATAGTTTTGAGATTCAGTTTCAGTCGTCTC 103530
|||||||||||||| || || ||||||| | || |||||| ||||||| || ||
Sbjct 22562871 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 22562812
Query 103531 AC-GAACCAGCGAGGACGTAACAAGCGAACCGTGCATAGCACTGAACAGTGAACCACCGA 103589
| || | | | || || |||| ||||| |||||||||||||| || ||||| ||||
Sbjct 22562811 CCTGATCAAACTAGAGGTTACCAAG-GAACCATGCATAGCACTGAATAGGGAACCGCCGA 22562753
Query 103590 AGACTCCAGCAACGCCCAGCATGTGGAAGGGGTGCATGAGAATGTTATGTTCGGCTTGGA 103649
| || ||||| || || | |||||| || || ||||| || |||||||| || || ||||
Sbjct 22562752 ATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGA 22562693
Query 103650 AGACCAGCATGTAGTTGAAGGTTCCCGAAATACCCAAAGGCATAGCATCGGAGAACGAAC 103709
| || | ||| ||||||| || || || || || ||||||||| |||| ||||| |
Sbjct 22562692 ATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTC 22562633
Query 103710 CTTGACCAAAGGGGTAGACCAAGAATACTGCGGACGCAGCCGCAACAGGAGCAGAGTATG 103769
||||||||| ||||| | |||||| || |||| ||||| ||||||||||| || ||||
Sbjct 22562632 CTTGACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATG 22562573
Query 103770 CGACACAGATCCAGGGGCGCATGCCCAGACGGTAGGACAATTCCCACTCACGTCCCATAT 103829
| ||| ||||| || ||||| ||||||||| | || |||||||||||| |||||||
Sbjct 22562572 CAACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATAT 22562513
Query 103830 ATGCATAGATGCCAATGAGGAAGTGGAATACTACAAGTTGGAAAGGACCACCGTTATACA 103889
| | | |||| | |||||| | || | || | ||||||| || || || |
Sbjct 22562512 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATA 22562453
Query 103890 GCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGTGAAGACCAATTGCGTTGG 103949
||||||||||| |||||| ||||||||||| || || ||||| | || || || |
Sbjct 22562452 ACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAG 22562393
Query 103950 AGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACATGAGTGAACCAGCGACGG 104009
| | |||| || ||||||||||| || ||||| ||||| | | ||||||| || |
Sbjct 22562392 AAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAG 22562333
Query 104010 GTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGAAAGCAACGATGAA-GCAG 104068
| |||||||| || || ||||| || ||||| || || | ||| || | || || |||
Sbjct 22562332 GCTCACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAG 22562273
Query 104069 ATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAACCAACCAACATAGAGACGG 104128
| ||||| | ||| | || |||||||||| ||||||||||| || | || ||||||
Sbjct 22562272 A-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGG 22562214
Query 104129 TTGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCAC 104167
|| | || || | ||| | ||||||| | |||||
Sbjct 22562213 TTTTCGGTGCTAGTTATCCAGTTGCAGAAGCGACCCCAC 22562175
Score = 143 bits (158), Expect = 3e-29
Identities = 220/310 (71%), Gaps = 3/310 (1%)
Strand=Plus/Minus
Query 103872 AAGGACCACCGTTATACAGCCACTCATCAAGAGATGCTGCTTCCCAAATGGGATAGAAGT 103931
||||||| || || || | ||||||||||| |||||| ||||||||||| || || ||||
Sbjct 22562146 AAGGACCGCCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGT 22562087
Query 103932 GAAGACCAATTGCGTTGGAGGAGGGAACAACTGCACCAGAGATGATGTTGTTACCGTACA 103991
| || || || || | |||| || ||||||||||| || ||||| ||||| |
Sbjct 22562086 TCAATCCGATCGCCGCAGAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAA 22562027
Query 103992 TGAGTGAACCAGCGACGGGTTCACGAATGCCGTCGATATCGACGGGAGGTGCTGCTACGA 104051
| ||||||| || | ||||||| | || ||||| || ||||| || || | ||
Sbjct 22562026 GTAAAGAACCAGAAACATGCCCACGAATATCATCAATATCTACTGGAGGGGCAGCGATGA 22561967
Query 104052 AAGCAACGATGAA-GCAGATGGTTGCCGCCAACAGAGTTGGGATCATCAGCACACCGAAC 104110
| || | || || |||| ||||| | ||| | || |||||||||| |||||||||
Sbjct 22561966 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAAC 22561908
Query 104111 CAACCAACATAGAGACGGTTGTTTGTCGATGTAACCCACTCGCAGAAGTTATCCCACGAG 104170
|| || | || |||||||| | || || | ||| | ||||||| | ||||| |
Sbjct 22561907 CATCCGATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAAGCGACCCCAC-AT 22561849
Query 104171 GATTGTGATT 104180
| ||||| ||
Sbjct 22561848 GCTTGTGCTT 22561839
>seq5
Length=25164199
Score = 156 bits (172), Expect = 5e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101825 ACGTCTCGAACTCTGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 101884
||||||| || || |||||||| |||| | ||| | ||||| || |||||||| ||||
Sbjct 21599390 ACGTCTCAAATTCAGGATCTTCCACTGCACGGATTTTCTGGGAAACGAAGTCATAGGCAC 21599331
Query 101885 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAA 101944
| ||||| ||||| || || | | || || | ||| |||| ||| | || || |
Sbjct 21599330 GTAGGTTCAGAGCCAGGCCGACTACGCCAATAGTACTCATCCATTAACCGGTGACCGGTA 21599271
Query 101945 CAAAGAGCATAAAGAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAG 102004
|||| |||||||||||||| ||||| | ||||| ||| |||| |||||||||||| |
Sbjct 21599270 CAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGG 21599211
Query 102005 ACCAGAAACGGTTTGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGT 102053
|||| || || || || || || ||||||||||| ||||| |||| ||
Sbjct 21599210 ACCAAAAGCGATTAGCGGTGACTATTGAATAAGTTTCTTCAGCTTGAGT 21599162
>seq3
Length=46202548
Score = 111 bits (122), Expect = 2e-19
Identities = 126/168 (75%), Gaps = 1/168 (1%)
Strand=Plus/Plus
Query 103192 GTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAGACCAGCGCGGTTGAGAACGTC 103251
|| |||||| ||||| |||||||| ||||||||| | ||| || ||||||| | ||
Sbjct 10578632 GTGGTGAGCATTACGTTCGTGCATTACTTCCATAGCAAGATTTGCACGGTTGATGATATC 10578691
Query 103252 TGCCCAGGTGTTCAACACACGACCCTGACCATCAAGGATGGACTGGTTGAAGTTGAATCC 103311
||||| || | | || ||||| || | ||||| | || |||||||| ||||||||
Sbjct 10578692 AGCCCAAGTATAAATAACGCGACCTTGGCTATCAACTACAGA-TGGTTGAAATTGAATCC 10578750
Query 103312 GTTCAGGTTGAACGCCATGGTGCTAACACCAAGTGCGGTGAACCAGAT 103359
||| || ||||| ||||| || |||| ||| | || |||||||| ||
Sbjct 10578751 GTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAAAT 10578798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633436881503040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |