Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq10 480 9e-131
seq8 480 9e-131
seq7 480 9e-131
seq6 86.0 7e-12
>seq10
Length=17164355
Score = 480 bits (532), Expect = 9e-131
Identities = 703/986 (71%), Gaps = 6/986 (1%)
Strand=Plus/Minus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108
||||||||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | ||
Sbjct 15961348 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 15961289
Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGC-ATCAACAACTGA 124167
|| | ||| | | |||| |||| || | | || || || |||||| || ||
Sbjct 15961288 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACC-TTGGCTATCAACTACAGA 15961230
Query 124168 TTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAA 124227
|||||| || ||||| || || | ||||| ||||| || | ||||| | || || ||
Sbjct 15961229 TTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAA 15961170
Query 124228 CCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAA 124287
||| | | ||| ||||| || | || | ||||||||| | | | |||||||| ||
Sbjct 15961169 CCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAA 15961110
Query 124288 TGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGT 124347
|||||| |||||||| | || ||||| ||||| || || || || || || || ||
Sbjct 15961109 ACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATAAGT 15961050
Query 124348 TTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCT 124407
||||| ||||| || || | ||||| | || || || | || || ||||| ||
Sbjct 15961049 CTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTCCCT 15960990
Query 124408 GATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACAT 124467
||| | | ||| || || | ||||||||||| || ||||| || || ||||| |
Sbjct 15960989 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 15960930
Query 124468 TCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAAC 124527
|| ||||| ||| |||||| || |||||||| || |||||||||||||| ||||| ||
Sbjct 15960929 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAATAC 15960870
Query 124528 GAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTG 124587
| |||||||||||||||||| || || || | ||||||||||||||||| || ||
Sbjct 15960869 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 15960810
Query 124588 ACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAAC 124647
||||| ||||| | ||||| |||||| ||||| | || || |||||||| |||||
Sbjct 15960809 ACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 15960750
Query 124648 ACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGC 124707
| |||||||||||||| || | | | | |||||||||| | ||||| ||
Sbjct 15960749 AGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATATAACA 15960690
Query 124708 TGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCA 124767
| | ||||| | |||||| | || | | || ||||||||| ||||| || |||||
Sbjct 15960689 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCA 15960630
Query 124768 TTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGA 124827
|||||||||| ||| |||||||| |||||||| ||||| | |||||| || || |
Sbjct 15960629 CTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGT 15960570
Query 124828 TGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTC 124887
|||| || ||||||||||| || ||||| || || | |||||||| | || || ||
Sbjct 15960569 AGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAGGCTC 15960510
Query 124888 TCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTG 124946
| || || || ||||| || ||||| || || || || || | || || ||| | |
Sbjct 15960509 ACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACA-GAAG 15960451
Query 124947 CTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGT 125006
||| || | |||| || ||||| | |||||| ||||| || | |||| | ||| |
Sbjct 15960450 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT-T 15960392
Query 125007 TTGTTGAT-GTTACCCACTCACAGAA 125031
| | || | |||| ||| | |||||
Sbjct 15960391 TCGGTGCTAGTTATCCAGTTGCAGAA 15960366
>seq8
Length=23026653
Score = 480 bits (532), Expect = 9e-131
Identities = 703/986 (71%), Gaps = 6/986 (1%)
Strand=Plus/Minus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108
||||||||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | ||
Sbjct 17291438 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 17291379
Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGC-ATCAACAACTGA 124167
|| | ||| | | |||| |||| || | | || || || |||||| || ||
Sbjct 17291378 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACC-TTGGCTATCAACTACAGA 17291320
Query 124168 TTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAA 124227
|||||| || ||||| || || | ||||| ||||| || | ||||| | || || ||
Sbjct 17291319 TTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAA 17291260
Query 124228 CCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAA 124287
||| | | ||| ||||| || | || | ||||||||| | | | |||||||| ||
Sbjct 17291259 CCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAA 17291200
Query 124288 TGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGT 124347
|||||| |||||||| | || ||||| ||||| || || || || || || || ||
Sbjct 17291199 ACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATAAGT 17291140
Query 124348 TTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCT 124407
||||| ||||| || || | ||||| | || || || | || || ||||| ||
Sbjct 17291139 CTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTCCCT 17291080
Query 124408 GATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACAT 124467
||| | | ||| || || | ||||||||||| || ||||| || || ||||| |
Sbjct 17291079 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 17291020
Query 124468 TCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAAC 124527
|| ||||| ||| |||||| || |||||||| || |||||||||||||| ||||| ||
Sbjct 17291019 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAATAC 17290960
Query 124528 GAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTG 124587
| |||||||||||||||||| || || || | ||||||||||||||||| || ||
Sbjct 17290959 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 17290900
Query 124588 ACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAAC 124647
||||| ||||| | ||||| |||||| ||||| | || || |||||||| |||||
Sbjct 17290899 ACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 17290840
Query 124648 ACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGC 124707
| |||||||||||||| || | | | | |||||||||| | ||||| ||
Sbjct 17290839 AGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATATAACA 17290780
Query 124708 TGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCA 124767
| | ||||| | |||||| | || | | || ||||||||| ||||| || |||||
Sbjct 17290779 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCA 17290720
Query 124768 TTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGA 124827
|||||||||| ||| |||||||| |||||||| ||||| | |||||| || || |
Sbjct 17290719 CTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGT 17290660
Query 124828 TGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTC 124887
|||| || ||||||||||| || ||||| || || | |||||||| | || || ||
Sbjct 17290659 AGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAGGCTC 17290600
Query 124888 TCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTG 124946
| || || || ||||| || ||||| || || || || || | || || ||| | |
Sbjct 17290599 ACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACA-GAAG 17290541
Query 124947 CTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGT 125006
||| || | |||| || ||||| | |||||| ||||| || | |||| | ||| |
Sbjct 17290540 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT-T 17290482
Query 125007 TTGTTGAT-GTTACCCACTCACAGAA 125031
| | || | |||| ||| | |||||
Sbjct 17290481 TCGGTGCTAGTTATCCAGTTGCAGAA 17290456
Score = 376 bits (416), Expect = 3e-99
Identities = 708/1043 (68%), Gaps = 31/1043 (3%)
Strand=Plus/Plus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | ||||| || || || ||||||| || ||| ||||| || ||
Sbjct 17281593 TTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTG 17281652
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || || |||||| || | || || || || | |||||| || || || |||||
Sbjct 17281653 ATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGAA 17281712
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || || || ||||| ||||| | || || || || || ||||| || || |
Sbjct 17281713 AGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCACG 17281772
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| || || || || || | || |||| |||| | ||| |||| || ||
Sbjct 17281773 TAGGTTCAGAGCCAGGCCGACTACGCCAATAGCACTCATCCATAAACCGGTGACCGGTAC 17281832
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| | ||||| ||| ||||| | | ||| || ||||| || | |||||| || || ||
Sbjct 17281833 AAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGA 17281892
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || | || || || | ||| |||||||||||| | || || || | || ||
Sbjct 17281893 CCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 17281952
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| || | | ||| ||| ||| ||| | | ||
Sbjct 17281953 GCGGAAGGTATTTGC---------ACCATCACC------------GTCCTCAAATAGAGT 17281991
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
||| | ||| ||||| |||||||| || ||||| | || | |||| || ||| |||||
Sbjct 17281992 GTTTTCCACGGTTGCCCCATGAATAGCGCATAGCAGAGCCGCGCCTAATACTCCGGCAAC 17282051
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
|||||||| |||||||| ||||| || || || || ||||| | ||| | ||| |
Sbjct 17282052 TCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAGAGGATGAA 17282111
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||||| || ||||| || || || || || |||||||||| | || || |||||
Sbjct 17282112 TCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGG 17282171
Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525
||| ||||| || | | | || || ||||| ||||||||| | ||| || ||
Sbjct 17282172 ATAAATCAGGAATACGGAAACAAAAACAGCGATTGGGCCAGAGAATGAAATTGCATTATA 17282231
Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585
||| | | ||| | || | |||||||| | | |||||||||||| ||| |
Sbjct 17282232 AGGCCGCAATTGAACAGACCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGC 17282291
Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645
||| | ||||| | || ||||| |||| ||||| || | ||| |||||||| ||
Sbjct 17282292 AAAAGCCCCATGGAGAGCAACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAA 17282351
Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGA--GACTATG---ACCCATTGCGTCA 123700
||||||||||| || ||||| || | || | || | || | | ||||
Sbjct 17282352 ATCCCCTTGTGCTTCCGGGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGG---- 17282407
Query 123701 CCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATA 123760
|||| ||||| |||||||| |||||||| || || || | ||| ||| || |
Sbjct 17282408 -CAGGGGTGGAAACTGCTGCGGTTAAGAAATTGCAACCTTCCAAATAGGAACTCGCCAAT 17282466
Query 123761 CCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGA 123820
||||| |||||||| || || || || || || ||| |||||||| || | | | |
Sbjct 17282467 CCATGGGTATACCAAGAAGTTACAAAAGTTGTCCCTGTAAACCAACCTCCTAAAGCGAAA 17282526
Query 123821 TACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTT 123880
|| |||||||| | ||| || || ||||||||||||| || |||||||| || || |
Sbjct 17282527 TAAGCACAAGGAAAAAGCAATAGGCCAGACCATCCTACAAAAACAAAACGGTCCCTTCGT 17282586
Query 123881 AACCAGTCGTCAAGAACATCAAA 123903
||||||||||| | || ||||||
Sbjct 17282587 AACCAGTCGTCCATAATATCAAA 17282609
>seq7
Length=26479886
Score = 480 bits (532), Expect = 9e-131
Identities = 703/986 (71%), Gaps = 6/986 (1%)
Strand=Plus/Minus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108
||||||||||| ||||||||||| ||||| | ||| ||||| ||||||||||| | ||
Sbjct 22563167 GCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGATTA 22563108
Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGC-ATCAACAACTGA 124167
|| | ||| | | |||| |||| || | | || || || |||||| || ||
Sbjct 22563107 GCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACC-TTGGCTATCAACTACAGA 22563049
Query 124168 TTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAA 124227
|||||| || ||||| || || | ||||| ||||| || | ||||| | || || ||
Sbjct 22563048 TTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAA 22562989
Query 124228 CCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAA 124287
||| | | ||| ||||| || | || | ||||||||| | | | |||||||| ||
Sbjct 22562988 CCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAA 22562929
Query 124288 TGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGT 124347
|||||| |||||||| | || ||||| ||||| || || || || || || || ||
Sbjct 22562928 ACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATAAGT 22562869
Query 124348 TTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCT 124407
||||| ||||| || || | ||||| | || || || | || || ||||| ||
Sbjct 22562868 CTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTCCCT 22562809
Query 124408 GATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACAT 124467
||| | | ||| || || | ||||||||||| || ||||| || || ||||| |
Sbjct 22562808 GATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATAC 22562749
Query 124468 TCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAAC 124527
|| ||||| ||| |||||| || |||||||| || |||||||||||||| ||||| ||
Sbjct 22562748 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAATAC 22562689
Query 124528 GAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTG 124587
| |||||||||||||||||| || || || | ||||||||||||||||| || ||
Sbjct 22562688 AATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCCTTG 22562629
Query 124588 ACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAAC 124647
||||| ||||| | ||||| |||||| ||||| | || || |||||||| |||||
Sbjct 22562628 ACCAATAGGGTAAATCAAGAAAACAGCGGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 22562569
Query 124648 ACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGC 124707
| |||||||||||||| || | | | | |||||||||| | ||||| ||
Sbjct 22562568 AGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATATAACA 22562509
Query 124708 TGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCA 124767
| | ||||| | |||||| | || | | || ||||||||| ||||| || |||||
Sbjct 22562508 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCA 22562449
Query 124768 TTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGA 124827
|||||||||| ||| |||||||| |||||||| ||||| | |||||| || || |
Sbjct 22562448 CTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGT 22562389
Query 124828 TGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTC 124887
|||| || ||||||||||| || ||||| || || | |||||||| | || || ||
Sbjct 22562388 AGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACAGGCTC 22562329
Query 124888 TCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTG 124946
| || || || ||||| || ||||| || || || || || | || || ||| | |
Sbjct 22562328 ACGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACA-GAAG 22562270
Query 124947 CTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGT 125006
||| || | |||| || ||||| | |||||| ||||| || | |||| | ||| |
Sbjct 22562269 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT-T 22562211
Query 125007 TTGTTGAT-GTTACCCACTCACAGAA 125031
| | || | |||| ||| | |||||
Sbjct 22562210 TCGGTGCTAGTTATCCAGTTGCAGAA 22562185
Score = 127 bits (140), Expect = 2e-24
Identities = 218/311 (70%), Gaps = 4/311 (1%)
Strand=Plus/Minus
Query 124723 GAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGC 124782
|||||| | || | | || ||||||||| ||||| || ||||| |||||||||| |||
Sbjct 22562169 GAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAACCACTCATCAACAGATGC 22562110
Query 124783 TGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACC 124842
|||||||| |||||||| |||| | |||||| || || | |||| || |||||
Sbjct 22562109 AGCTTCCCAAATTGGGTAAAAGTTCAATCCGATCGCCGCAGAAGTAGGAATAATGGCACC 22562050
Query 124843 AGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGAT 124902
|||||| || ||||| || || | |||||||| | || | | | || | || ||
Sbjct 22562049 AGAGATAATATTGTTTCCGTAAAGTAAAGAACCAGAAACATGCCCACGAATATCATCAAT 22561990
Query 124903 ATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGC 124961
||| || ||||| || || || || || | || || ||| | | ||| || | ||||
Sbjct 22561989 ATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACA-GAAGTTGCGGTCAATAAGG 22561931
Query 124962 ATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTTGTTGAT-GTTACC 125020
|| ||||| | |||||| ||||| || | |||| | ||| || | || | |||| |
Sbjct 22561930 TAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGGTT-TTCGGTGCTAGTTATC 22561872
Query 125021 CACTCACAGAA 125031
|| | |||||
Sbjct 22561871 CAGTTGCAGAA 22561861
>seq6
Length=30401905
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||||||||| | |||||||| || || ||||||||||| ||||||||||| ||
Sbjct 22366707 ACACCAATAGGACCCATTCCAGGACCACCCCCACCATGTGGAATGCAGAATGTCTTGTGA 22366648
Query 138243 AAATTTAGATGACATACATCTGCACCA 138269
| || || || || |||||||| |||
Sbjct 22366647 AGGTTAAGGTGGCAAACATCTGCTCCA 22366621
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||||||||| | |||||||| || || ||||||||||| ||||||||||| ||
Sbjct 22367268 ACACCAATAGGACCCATTCCAGGACCACCCCCACCATGTGGAATGCAGAATGTCTTGTGA 22367209
Query 138243 AAATTTAGATGACATACATCTGCACCA 138269
| || || || || |||||||| |||
Sbjct 22367208 AGGTTGAGGTGGCAAACATCTGCTCCA 22367182
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||||||||| | |||||||| || || ||||||||||| ||||||||||| ||
Sbjct 22380727 ACACCAATAGGACCCATTCCAGGACCACCCCCACCATGTGGAATGCAGAATGTCTTGTGA 22380668
Query 138243 AAATTTAGATGACATACATCTGCACCA 138269
| || || || || |||||||| |||
Sbjct 22380667 AGGTTAAGGTGGCAAACATCTGCTCCA 22380641
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||||||||| | |||||||| || || ||||||||||| ||||||||||| ||
Sbjct 22873851 ACACCAATAGGACCCATTCCAGGACCACCCCCACCATGTGGAATGCAGAATGTCTTGTGA 22873792
Query 138243 AAATTTAGATGACATACATCTGCACCA 138269
| || || || || |||||||| |||
Sbjct 22873791 AGGTTAAGGTGGCAAACATCTGCTCCA 22873765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578928283293760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |