Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq10 572 2e-158 seq8 572 2e-158 seq7 572 2e-158 seq5 122 1e-22 seq4 87.8 2e-12 >seq10 Length=17164355 Score = 572 bits (634), Expect = 2e-158 Identities = 722/989 (73%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| | Sbjct 15960365 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 15960424 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||||||||| | Sbjct 15960425 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 15960483 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || ||||| || || |||||||| | | || || |||| Sbjct 15960484 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 15960543 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||||||||| || |||| |||| || || || | ||||| || || | Sbjct 15960544 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 15960603 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| || ||| | || || || ||||||| | || ||| Sbjct 15960604 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 15960663 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | |||||| | |||| | | || ||||||||||||||||||||| || || Sbjct 15960664 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 15960723 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 |||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | | Sbjct 15960724 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 15960783 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | || ||| | |||||||| ||||||||||||| ||||| | |||| Sbjct 15960784 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 15960843 Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306 | || || || ||||||| ||| | || ||||| || ||||| || || || ||||||| Sbjct 15960844 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 15960903 Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366 | || || ||| | || || ||||| ||||| || || | || ||||||||||| | Sbjct 15960904 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 15960963 Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426 | ||||| || ||| | | | || || || ||||||| |||||| || | | Sbjct 15960964 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 15961023 Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486 |||||| || || ||||| ||||| || || || || || |||||||||||||| || | Sbjct 15961024 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 15961083 Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546 | || || ||||||||||| ||| || |||||||| || || || ||||||||| | | Sbjct 15961084 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 15961143 Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606 |||| |||||||| || || || |||||||| || | || | || ||||| |||| Sbjct 15961144 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 15961203 Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666 | || ||||| ||||| |||||||| || | ||||| | || ||||| || | || | Sbjct 15961204 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 15961263 Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726 | ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| | Sbjct 15961264 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 15961323 Query 166727 CACACAACTTCCCCCTCGACCTCGCTGCT 166755 | ||||||||||| || ||||| |||||| Sbjct 15961324 CTCACAACTTCCCTCTAGACCTAGCTGCT 15961352 >seq8 Length=23026653 Score = 572 bits (634), Expect = 2e-158 Identities = 722/989 (73%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| | Sbjct 17290455 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 17290514 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||||||||| | Sbjct 17290515 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 17290573 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || ||||| || || |||||||| | | || || |||| Sbjct 17290574 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 17290633 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||||||||| || |||| |||| || || || | ||||| || || | Sbjct 17290634 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 17290693 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| || ||| | || || || ||||||| | || ||| Sbjct 17290694 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 17290753 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | |||||| | |||| | | || ||||||||||||||||||||| || || Sbjct 17290754 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 17290813 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 |||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | | Sbjct 17290814 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 17290873 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | || ||| | |||||||| ||||||||||||| ||||| | |||| Sbjct 17290874 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 17290933 Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306 | || || || ||||||| ||| | || ||||| || ||||| || || || ||||||| Sbjct 17290934 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 17290993 Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366 | || || ||| | || || ||||| ||||| || || | || ||||||||||| | Sbjct 17290994 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 17291053 Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426 | ||||| || ||| | | | || || || ||||||| |||||| || | | Sbjct 17291054 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 17291113 Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486 |||||| || || ||||| ||||| || || || || || |||||||||||||| || | Sbjct 17291114 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 17291173 Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546 | || || ||||||||||| ||| || |||||||| || || || ||||||||| | | Sbjct 17291174 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 17291233 Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606 |||| |||||||| || || || |||||||| || | || | || ||||| |||| Sbjct 17291234 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 17291293 Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666 | || ||||| ||||| |||||||| || | ||||| | || ||||| || | || | Sbjct 17291294 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 17291353 Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726 | ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| | Sbjct 17291354 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 17291413 Query 166727 CACACAACTTCCCCCTCGACCTCGCTGCT 166755 | ||||||||||| || ||||| |||||| Sbjct 17291414 CTCACAACTTCCCTCTAGACCTAGCTGCT 17291442 Score = 531 bits (588), Expect = 6e-146 Identities = 735/1022 (72%), Gaps = 10/1022 (1%) Strand=Plus/Minus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | || |||||| | |||||| |||||||||||||| || |||||||| Sbjct 17282609 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17282550 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | |||||||| ||||||| | ||| | || |||||| |||| ||||| ||||| Sbjct 17282549 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17282490 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGCGTCCAGTT---ATCTTGAGGGTGCGAACTTT 167190 || || ||||||||| |||||| | ||| |||| || | || ||| || ||| Sbjct 17282489 GTAACTTCTTGGTATACCCATGGATTGGCG---AGTTCCTATTTGGAAGGTTGCAA-TTT 17282434 Query 167191 CTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATG 167249 |||| | || |||||| || || || || | | | || ||||| | || ||||| Sbjct 17282433 CTTAACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATG 17282374 Query 167250 GGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTT 167309 ||| || ||| | ||||||||||| | ||| ||| | || || || ||| |||| Sbjct 17282373 GGGCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTT 17282314 Query 167310 TGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGC 167369 ||| || ||||| || || ||||| || || ||||||||| | || || ||||||||||| Sbjct 17282313 TGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 17282254 Query 167370 TCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCT 167428 ||| ||| | | | || || || ||||| ||| | |||||||| || || ||||| | Sbjct 17282253 TCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTT 17282195 Query 167429 TCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCT 167488 | ||| ||| ||||| | ||||| || || ||| | | ||||||||||| ||| | Sbjct 17282194 TTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTT 17282135 Query 167489 TCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACAC 167548 | || || || || || || |||||| |||||||| |||||||||| || || ||||| Sbjct 17282134 TTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGT 17282075 Query 167549 TGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAA 167608 |||| ||||||||||||||||| || || || | | || | || |||| | || | Sbjct 17282074 TGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTA 17282015 Query 167609 TCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTA 167668 | ||||| | || || || || ||| | | ||| || ||||| ||||| || || Sbjct 17282014 TTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCC 17281955 Query 167669 AGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCT 167728 || || | | ||||| | ||||| |||||||||||||| || || || || || | Sbjct 17281954 GCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTT 17281895 Query 167729 GGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTAT 167788 |||| || ||||| || ||||||| ||| ||||| ||| | |||||||||||| ||| Sbjct 17281894 GGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTAT 17281835 Query 167789 TCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATC 167848 | || || || | || | |||| | |||||| | | || |||||||| || | Sbjct 17281834 TTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACC 17281775 Query 167849 TTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAA 167908 | ||||| || || |||||||| || || ||| | || ||||| ||||| || ||||| | Sbjct 17281774 TACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 17281715 Query 167909 CTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCG 167968 ||||||| || ||||| || ||| | || || ||| |||| || ||| | ||| || | Sbjct 17281714 CTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGG 17281655 Query 167969 ATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTAT 168028 |||| |||||||| || || | ||||| ||||| ||||| ||||| || ||||| || | Sbjct 17281654 ATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTT 17281595 Query 168029 AA 168030 || Sbjct 17281594 AA 17281593 Score = 129 bits (142), Expect = 7e-25 Identities = 139/184 (76%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 166393 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 166452 || || || ||||||| |||||| || | |||||||| || || ||||| ||||| Sbjct 13113466 AGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAG 13113525 Query 166453 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 166512 || || || || | |||||||||||||| || || || || ||||||||||| ||| Sbjct 13113526 ACTTATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGT 13113585 Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572 || |||||||| || || || ||||| ||| | ||||| |||| ||| || || || ||| Sbjct 13113586 TTTAACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGG 13113645 Query 166573 TTCA 166576 |||| Sbjct 13113646 TTCA 13113649 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 ||| ||| |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 20644805 TCCGTTC-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 20644747 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 20644746 GTTCGAATCCTACTTGGGGAG 20644726 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||| ||| Sbjct 17312670 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 17312611 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 17312610 CCTACTTGGGGAG 17312598 >seq7 Length=26479886 Score = 572 bits (634), Expect = 2e-158 Identities = 722/989 (73%), Gaps = 2/989 (0%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| | Sbjct 22562184 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22562243 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||||||||| | Sbjct 22562244 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22562302 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || ||||| || || |||||||| | | || || |||| Sbjct 22562303 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 22562362 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||||||||| || |||| |||| || || || | ||||| || || | Sbjct 22562363 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 22562422 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| || ||| | || || || ||||||| | || ||| Sbjct 22562423 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562482 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | | |||||| | |||| | | || ||||||||||||||||||||| || || Sbjct 22562483 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 22562542 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186 |||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | | Sbjct 22562543 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 22562602 Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246 | || ||| | | || ||| | |||||||| ||||||||||||| ||||| | |||| Sbjct 22562603 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 22562662 Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306 | || || || ||||||| ||| | || ||||| || ||||| || || || ||||||| Sbjct 22562663 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 22562722 Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366 | || || ||| | || || ||||| ||||| || || | || ||||||||||| | Sbjct 22562723 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 22562782 Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426 | ||||| || ||| | | | || || || ||||||| |||||| || | | Sbjct 22562783 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 22562842 Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486 |||||| || || ||||| ||||| || || || || || |||||||||||||| || | Sbjct 22562843 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 22562902 Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546 | || || ||||||||||| ||| || |||||||| || || || ||||||||| | | Sbjct 22562903 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 22562962 Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606 |||| |||||||| || || || |||||||| || | || | || ||||| |||| Sbjct 22562963 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 22563022 Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666 | || ||||| ||||| |||||||| || | ||||| | || ||||| || | || | Sbjct 22563023 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 22563082 Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726 | ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| | Sbjct 22563083 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 22563142 Query 166727 CACACAACTTCCCCCTCGACCTCGCTGCT 166755 | ||||||||||| || ||||| |||||| Sbjct 22563143 CTCACAACTTCCCTCTAGACCTAGCTGCT 22563171 Score = 140 bits (154), Expect = 4e-28 Identities = 219/311 (70%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| | Sbjct 22561860 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22561919 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||||||||| | Sbjct 22561920 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22561978 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || | || |||| | || |||||||| | | || || |||| Sbjct 22561979 CTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACA 22562038 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||||||||| || |||| |||| || || || | |||| || || | Sbjct 22562039 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAA 22562098 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| || ||| | || || || ||||||| | || ||| Sbjct 22562099 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562158 Query 166067 TCTTCCACTTC 166077 | | |||||| Sbjct 22562159 TTCTACACTTC 22562169 >seq5 Length=25164199 Score = 122 bits (134), Expect = 1e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 167683 ACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTC 167742 ||||| | ||||| ||||||||||| || || || || || || ||||| || ||||| Sbjct 21599162 ACTCAAGCTGAAGAAACTTATTCAATAGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 21599221 Query 167743 GGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATG 167802 || ||||||| ||| ||||| ||| | |||||||||||| |||| || || || | Sbjct 21599222 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 21599281 Query 167803 GGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGAT 167862 || |||| | |||||| | | || |||||||| || || ||||| || || Sbjct 21599282 GGTTAATGGATGAGTACTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 21599341 Query 167863 TTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAAC 167909 |||||||| || | ||| | || | ||| ||||| || ||||| || Sbjct 21599342 TTCGTTTCCCAGAAAATCCGTGCAGTGGAAGATCCTGAATTTGAGAC 21599388 >seq4 Length=32292456 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||| ||| Sbjct 2820607 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 2820548 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 2820547 CCTACTTGGGGAG 2820535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561180032867200