Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_020859.1
Length=175430
Score E
Sequences producing significant alignments: (Bits) Value
seq10 572 2e-158
seq8 572 2e-158
seq7 572 2e-158
seq5 122 1e-22
seq4 87.8 2e-12
>seq10
Length=17164355
Score = 572 bits (634), Expect = 2e-158
Identities = 722/989 (73%), Gaps = 2/989 (0%)
Strand=Plus/Plus
Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827
||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| |
Sbjct 15960365 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 15960424
Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886
|||||| || || | ||| | |||||| |||| || || |||||||||||||||| |
Sbjct 15960425 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 15960483
Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946
| || || || || || || || ||||| || || |||||||| | | || || ||||
Sbjct 15960484 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 15960543
Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006
| || ||||||||||| || |||| |||| || || || | ||||| || || |
Sbjct 15960544 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 15960603
Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066
| |||||||| ||||| |||| || ||| | || || || ||||||| | || |||
Sbjct 15960604 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 15960663
Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126
| | |||||| | |||| | | || ||||||||||||||||||||| || ||
Sbjct 15960664 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 15960723
Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186
|||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | |
Sbjct 15960724 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 15960783
Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246
| || ||| | | || ||| | |||||||| ||||||||||||| ||||| | ||||
Sbjct 15960784 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 15960843
Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306
| || || || ||||||| ||| | || ||||| || ||||| || || || |||||||
Sbjct 15960844 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 15960903
Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366
| || || ||| | || || ||||| ||||| || || | || ||||||||||| |
Sbjct 15960904 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 15960963
Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426
| ||||| || ||| | | | || || || ||||||| |||||| || | |
Sbjct 15960964 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 15961023
Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486
|||||| || || ||||| ||||| || || || || || |||||||||||||| || |
Sbjct 15961024 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 15961083
Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546
| || || ||||||||||| ||| || |||||||| || || || ||||||||| | |
Sbjct 15961084 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 15961143
Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606
|||| |||||||| || || || |||||||| || | || | || ||||| ||||
Sbjct 15961144 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 15961203
Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666
| || ||||| ||||| |||||||| || | ||||| | || ||||| || | || |
Sbjct 15961204 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 15961263
Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726
| ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| |
Sbjct 15961264 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 15961323
Query 166727 CACACAACTTCCCCCTCGACCTCGCTGCT 166755
| ||||||||||| || ||||| ||||||
Sbjct 15961324 CTCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 572 bits (634), Expect = 2e-158
Identities = 722/989 (73%), Gaps = 2/989 (0%)
Strand=Plus/Plus
Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827
||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| |
Sbjct 17290455 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 17290514
Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886
|||||| || || | ||| | |||||| |||| || || |||||||||||||||| |
Sbjct 17290515 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 17290573
Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946
| || || || || || || || ||||| || || |||||||| | | || || ||||
Sbjct 17290574 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 17290633
Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006
| || ||||||||||| || |||| |||| || || || | ||||| || || |
Sbjct 17290634 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 17290693
Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066
| |||||||| ||||| |||| || ||| | || || || ||||||| | || |||
Sbjct 17290694 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 17290753
Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126
| | |||||| | |||| | | || ||||||||||||||||||||| || ||
Sbjct 17290754 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 17290813
Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186
|||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | |
Sbjct 17290814 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 17290873
Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246
| || ||| | | || ||| | |||||||| ||||||||||||| ||||| | ||||
Sbjct 17290874 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 17290933
Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306
| || || || ||||||| ||| | || ||||| || ||||| || || || |||||||
Sbjct 17290934 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 17290993
Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366
| || || ||| | || || ||||| ||||| || || | || ||||||||||| |
Sbjct 17290994 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 17291053
Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426
| ||||| || ||| | | | || || || ||||||| |||||| || | |
Sbjct 17291054 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 17291113
Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486
|||||| || || ||||| ||||| || || || || || |||||||||||||| || |
Sbjct 17291114 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 17291173
Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546
| || || ||||||||||| ||| || |||||||| || || || ||||||||| | |
Sbjct 17291174 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 17291233
Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606
|||| |||||||| || || || |||||||| || | || | || ||||| ||||
Sbjct 17291234 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 17291293
Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666
| || ||||| ||||| |||||||| || | ||||| | || ||||| || | || |
Sbjct 17291294 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 17291353
Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726
| ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| |
Sbjct 17291354 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 17291413
Query 166727 CACACAACTTCCCCCTCGACCTCGCTGCT 166755
| ||||||||||| || ||||| ||||||
Sbjct 17291414 CTCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 531 bits (588), Expect = 6e-146
Identities = 735/1022 (72%), Gaps = 10/1022 (1%)
Strand=Plus/Minus
Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073
|||||| | | || |||||| | |||||| |||||||||||||| || ||||||||
Sbjct 17282609 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17282550
Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133
|| | |||||||| ||||||| | ||| | || |||||| |||| ||||| |||||
Sbjct 17282549 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17282490
Query 167134 GTCACGAGTTGGTATACTCATGGACTCGCGTCCAGTT---ATCTTGAGGGTGCGAACTTT 167190
|| || ||||||||| |||||| | ||| |||| || | || ||| || |||
Sbjct 17282489 GTAACTTCTTGGTATACCCATGGATTGGCG---AGTTCCTATTTGGAAGGTTGCAA-TTT 17282434
Query 167191 CTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATG 167249
|||| | || |||||| || || || || | | | || ||||| | || |||||
Sbjct 17282433 CTTAACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATG 17282374
Query 167250 GGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTT 167309
||| || ||| | ||||||||||| | ||| ||| | || || || ||| ||||
Sbjct 17282373 GGGCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTT 17282314
Query 167310 TGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGC 167369
||| || ||||| || || ||||| || || ||||||||| | || || |||||||||||
Sbjct 17282313 TGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 17282254
Query 167370 TCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCT 167428
||| ||| | | | || || || ||||| ||| | |||||||| || || ||||| |
Sbjct 17282253 TCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTT 17282195
Query 167429 TCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCT 167488
| ||| ||| ||||| | ||||| || || ||| | | ||||||||||| ||| |
Sbjct 17282194 TTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTT 17282135
Query 167489 TCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACAC 167548
| || || || || || || |||||| |||||||| |||||||||| || || |||||
Sbjct 17282134 TTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGT 17282075
Query 167549 TGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAA 167608
|||| ||||||||||||||||| || || || | | || | || |||| | || |
Sbjct 17282074 TGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTA 17282015
Query 167609 TCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTA 167668
| ||||| | || || || || ||| | | ||| || ||||| ||||| || ||
Sbjct 17282014 TTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCC 17281955
Query 167669 AGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCT 167728
|| || | | ||||| | ||||| |||||||||||||| || || || || || |
Sbjct 17281954 GCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTT 17281895
Query 167729 GGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTAT 167788
|||| || ||||| || ||||||| ||| ||||| ||| | |||||||||||| |||
Sbjct 17281894 GGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTAT 17281835
Query 167789 TCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATC 167848
| || || || | || | |||| | |||||| | | || |||||||| || |
Sbjct 17281834 TTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACC 17281775
Query 167849 TTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAA 167908
| ||||| || || |||||||| || || ||| | || ||||| ||||| || ||||| |
Sbjct 17281774 TACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 17281715
Query 167909 CTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCG 167968
||||||| || ||||| || ||| | || || ||| |||| || ||| | ||| || |
Sbjct 17281714 CTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGG 17281655
Query 167969 ATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTAT 168028
|||| |||||||| || || | ||||| ||||| ||||| ||||| || ||||| || |
Sbjct 17281654 ATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTT 17281595
Query 168029 AA 168030
||
Sbjct 17281594 AA 17281593
Score = 129 bits (142), Expect = 7e-25
Identities = 139/184 (76%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 166393 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 166452
|| || || ||||||| |||||| || | |||||||| || || ||||| |||||
Sbjct 13113466 AGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAG 13113525
Query 166453 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 166512
|| || || || | |||||||||||||| || || || || ||||||||||| |||
Sbjct 13113526 ACTTATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGT 13113585
Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572
|| |||||||| || || || ||||| ||| | ||||| |||| ||| || || || |||
Sbjct 13113586 TTTAACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGG 13113645
Query 166573 TTCA 166576
||||
Sbjct 13113646 TTCA 13113649
Score = 89.7 bits (98), Expect = 6e-13
Identities = 69/81 (85%), Gaps = 1/81 (1%)
Strand=Plus/Minus
Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179
||| ||| |||||||||||||||| || ||||| ||| ||||||| || |||||||||
Sbjct 20644805 TCCGTTC-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 20644747
Query 18180 GTTCAAATCCTACCTGGGGAG 18200
|||| |||||||| |||||||
Sbjct 20644746 GTTCGAATCCTACTTGGGGAG 20644726
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187
|||||||||||||||| || ||||| ||| ||||||| || ||||||||||||| |||
Sbjct 17312670 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 17312611
Query 18188 CCTACCTGGGGAG 18200
||||| |||||||
Sbjct 17312610 CCTACTTGGGGAG 17312598
>seq7
Length=26479886
Score = 572 bits (634), Expect = 2e-158
Identities = 722/989 (73%), Gaps = 2/989 (0%)
Strand=Plus/Plus
Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827
||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| |
Sbjct 22562184 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22562243
Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886
|||||| || || | ||| | |||||| |||| || || |||||||||||||||| |
Sbjct 22562244 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22562302
Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946
| || || || || || || || ||||| || || |||||||| | | || || ||||
Sbjct 22562303 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 22562362
Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006
| || ||||||||||| || |||| |||| || || || | ||||| || || |
Sbjct 22562363 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 22562422
Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066
| |||||||| ||||| |||| || ||| | || || || ||||||| | || |||
Sbjct 22562423 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562482
Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126
| | |||||| | |||| | | || ||||||||||||||||||||| || ||
Sbjct 22562483 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 22562542
Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTG 166186
|||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | |
Sbjct 22562543 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 22562602
Query 166187 CAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAA 166246
| || ||| | | || ||| | |||||||| ||||||||||||| ||||| | ||||
Sbjct 22562603 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 22562662
Query 166247 TCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATC 166306
| || || || ||||||| ||| | || ||||| || ||||| || || || |||||||
Sbjct 22562663 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 22562722
Query 166307 CCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACG 166366
| || || ||| | || || ||||| ||||| || || | || ||||||||||| |
Sbjct 22562723 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 22562782
Query 166367 GAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACG 166426
| ||||| || ||| | | | || || || ||||||| |||||| || | |
Sbjct 22562783 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 22562842
Query 166427 GTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCG 166486
|||||| || || ||||| ||||| || || || || || |||||||||||||| || |
Sbjct 22562843 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 22562902
Query 166487 GTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTG 166546
| || || ||||||||||| ||| || |||||||| || || || ||||||||| | |
Sbjct 22562903 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 22562962
Query 166547 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCA 166606
|||| |||||||| || || || |||||||| || | || | || ||||| ||||
Sbjct 22562963 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 22563022
Query 166607 ACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 166666
| || ||||| ||||| |||||||| || | ||||| | || ||||| || | || |
Sbjct 22563023 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 22563082
Query 166667 CCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACG 166726
| ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| |
Sbjct 22563083 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 22563142
Query 166727 CACACAACTTCCCCCTCGACCTCGCTGCT 166755
| ||||||||||| || ||||| ||||||
Sbjct 22563143 CTCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 140 bits (154), Expect = 4e-28
Identities = 219/311 (70%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827
||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| |
Sbjct 22561860 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22561919
Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886
|||||| || || | ||| | |||||| |||| || || |||||||||||||||| |
Sbjct 22561920 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22561978
Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946
| || || || || || | || |||| | || |||||||| | | || || ||||
Sbjct 22561979 CTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACA 22562038
Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006
| || ||||||||||| || |||| |||| || || || | |||| || || |
Sbjct 22562039 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAA 22562098
Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066
| |||||||| ||||| |||| || ||| | || || || ||||||| | || |||
Sbjct 22562099 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562158
Query 166067 TCTTCCACTTC 166077
| | ||||||
Sbjct 22562159 TTCTACACTTC 22562169
>seq5
Length=25164199
Score = 122 bits (134), Expect = 1e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 167683 ACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTC 167742
||||| | ||||| ||||||||||| || || || || || || ||||| || |||||
Sbjct 21599162 ACTCAAGCTGAAGAAACTTATTCAATAGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 21599221
Query 167743 GGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATG 167802
|| ||||||| ||| ||||| ||| | |||||||||||| |||| || || || |
Sbjct 21599222 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 21599281
Query 167803 GGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGAT 167862
|| |||| | |||||| | | || |||||||| || || ||||| || ||
Sbjct 21599282 GGTTAATGGATGAGTACTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 21599341
Query 167863 TTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAAC 167909
|||||||| || | ||| | || | ||| ||||| || ||||| ||
Sbjct 21599342 TTCGTTTCCCAGAAAATCCGTGCAGTGGAAGATCCTGAATTTGAGAC 21599388
>seq4
Length=32292456
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187
|||||||||||||||| || ||||| ||| ||||||| || ||||||||||||| |||
Sbjct 2820607 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 2820548
Query 18188 CCTACCTGGGGAG 18200
||||| |||||||
Sbjct 2820547 CCTACTTGGGGAG 2820535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561180032867200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |