Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 84.2 4e-11
>seq5
Length=25164199
Score = 84.2 bits (92), Expect = 4e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| || || || | || || |||| |||| ||| || || || || |||
Sbjct 21087678 ATACCACCCCTGAGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCA 21087737
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| | || || |||| |||| || || ||||||||||| | |||||| || || ||
Sbjct 21087738 GCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGG 21087797
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || ||||| || || || || || ||| || | || || ||
Sbjct 21087798 GGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTATCAATGGTGTCCGAGCTCTCA 21087857
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| || || ||||| || || ||||| | ||| || | ||| |||||||||
Sbjct 21087858 ACCTCAAGGGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAAATCTGCATT 21087908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984357798958800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |