Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq8 625 3e-174
seq10 621 4e-173
seq7 621 4e-173
seq5 159 4e-34
seq3 96.9 4e-15
seq6 93.3 5e-14
>seq8
Length=23026653
Score = 625 bits (692), Expect = 3e-174
Identities = 754/1017 (74%), Gaps = 8/1017 (1%)
Strand=Plus/Minus
Query 152359 TTTGATGTCCTGGATGACTGGCTTAAGA-GAGACCGTTTCGTTTTTGTTGGTTGGTCTGG 152417
|||||| | |||| |||||| ||| || | |||||||| |||||||| || ||||||||
Sbjct 17282609 TTTGATATTATGGACGACTGG-TTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGG 17282551
Query 152418 ACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTT 152477
|| | |||||||| ||||||| | ||| | || |||||| |||| ||||| |||||
Sbjct 17282550 CCTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTT 17282491
Query 152478 CGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTC 152536
| || ||||||||| || || ||||| ||||||||| |||| || |||| ||||
Sbjct 17282490 TGTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTC 17282433
Query 152537 TTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGG 152595
||| | || |||||||| || || || || | | | || ||| | |||| || |||
Sbjct 17282432 TTAACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGG 17282373
Query 152596 GGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTT 152655
|| || || || ||||||||||| | ||| ||| | || || || ||| |||||
Sbjct 17282372 GGCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTT 17282313
Query 152656 GTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCA 152715
|| || ||||| |||||||| || ||||| ||||||||| | || || |||||||| ||
Sbjct 17282312 GTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCT 17282253
Query 152716 CG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTT 152774
|| ||| || | | || || || ||||| ||| | |||||||| || |||||||||||
Sbjct 17282252 CGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTT 17282194
Query 152775 TGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTT 152834
|||| ||| || || || || || ||||| ||||| ||||||| || || || |||
Sbjct 17282193 TGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTT 17282134
Query 152835 CGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATT 152894
|| || ||||| || || |||||| | |||||| | |||||||| || || ||||| ||
Sbjct 17282133 TGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTT 17282074
Query 152895 GAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCAT 152954
||| || |||||||||||||| ||||| || | || || | ||| |||| | || ||
Sbjct 17282073 GAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTAT 17282014
Query 152955 TCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAA 153014
|||||| | || || || || ||| | | | | || ||||| ||||| || |||
Sbjct 17282013 TCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCG 17281954
Query 153015 AGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTG 153074
||||| || ||||||| ||||| || ||||| ||||| || ||||| || || ||
Sbjct 17281953 CGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTG 17281894
Query 153075 GTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTT 153134
|||||| || ||||| |||||||| ||||||||| ||| | |||||||||||||| ||
Sbjct 17281893 GTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATT 17281834
Query 153135 TGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCT 153194
|||||| || | ||| | |||| | ||||||| | | || || ||||| || ||
Sbjct 17281833 TGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCT 17281774
Query 153195 TCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGAC 153254
||||| || || || || || || |||||| | || | ||||||||||||||||||||
Sbjct 17281773 ACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 17281714
Query 153255 GTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGA 153314
||||| || || ||||| ||||| ||||| ||| ||||||| ||| ||||| || ||
Sbjct 17281713 TTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGA 17281654
Query 153315 CCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371
|| |||||||| || | | |||||||| ||||| | ||||| || ||||||||
Sbjct 17281653 TCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597
Score = 621 bits (688), Expect = 4e-173
Identities = 716/961 (75%), Gaps = 2/961 (0%)
Strand=Plus/Plus
Query 150866 AACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACC 150925
|||||||| || |||| ||||||||||| ||||||| || || | ||| | |||||
Sbjct 17290483 AACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 17290542
Query 150926 ATTTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 150985
| || || | || ||||||||||| || || || || || ||||| || |||||
Sbjct 17290543 TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAG 17290602
Query 150986 CCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCT 151045
|| ||| |||||||| | | ||||| ||||| || ||||||||||| || ||||| ||
Sbjct 17290603 CCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACT 17290662
Query 151046 TCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGG 151105
||| || ||||| ||||||| || || || |||||||| || ||| | ||||| |||
Sbjct 17290663 TCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGG 17290722
Query 151106 CTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTATCTATGCT 151165
| ||||| || ||||||| | || |||| | |||||| | ||||| | | |
Sbjct 17290723 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGT 17290782
Query 151166 TACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGC-GT 151224
|| ||||||||||||||||||||| || ||| ||||||||||||| ||||| ||| ||
Sbjct 17290783 TATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGT 17290841
Query 151225 TGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCA 151284
|||||| || ||||| ||||| ||||| | || || ||| | | || ||| | |||||
Sbjct 17290842 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCA 17290901
Query 151285 AGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGT 151344
||| ||||||||||| ||||| | || || ||||| || ||||||| ||| ||||
Sbjct 17290902 AGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGT 17290961
Query 151345 CTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGT 151404
||||| |||||||| ||||| || ||||| || || || ||| | ||||| ||||||||
Sbjct 17290962 ATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGT 17291021
Query 151405 CTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 151464
||||| || || || ||| || ||||| ||||| |||| || ||| || | |
Sbjct 17291022 ATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 17291081
Query 151465 TGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 151524
|| ||||| |||||||| || || | ||||||| || |||||||| ||||||||
Sbjct 17291082 GGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGAC 17291141
Query 151525 CTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTT 151584
|| || || || ||||| || ||||| ||||| || | ||||||||||| ||| ||
Sbjct 17291142 TTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 17291201
Query 151585 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 151644
||||| || ||||| | ||||||||| | || || |||||||| || || || |||||
Sbjct 17291202 TAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTT 17291261
Query 151645 CACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 151704
|||||| | ||| | || || ||||| ||||| || ||||| ||||| |||||||| ||
Sbjct 17291262 CACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATC 17291321
Query 151705 CATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAGG 151764
| | ||| | || || || | || || ||||| || | | ||||||||
Sbjct 17291322 TGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAA 17291381
Query 151765 TCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGC 151824
||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 17291382 TCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 17291441
Query 151825 T 151825
|
Sbjct 17291442 T 17291442
Score = 120 bits (132), Expect = 3e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 151466 GAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 151525
|| ||||| |||||||| || || | |||||||| || |||||||| ||||||||
Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528
Query 151526 TACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTTC 151585
|| || || | ||||| || ||||| ||||| || | ||||||||||| ||| ||
Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588
Query 151586 AACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTC 151645
||||| || ||||| | ||||| ||| | || || |||| ||| || || || ||||||
Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGTTC 13113648
Query 151646 A 151646
|
Sbjct 13113649 A 13113649
>seq10
Length=17164355
Score = 621 bits (688), Expect = 4e-173
Identities = 716/961 (75%), Gaps = 2/961 (0%)
Strand=Plus/Plus
Query 150866 AACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACC 150925
|||||||| || |||| ||||||||||| ||||||| || || | ||| | |||||
Sbjct 15960393 AACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 15960452
Query 150926 ATTTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 150985
| || || | || ||||||||||| || || || || || ||||| || |||||
Sbjct 15960453 TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAG 15960512
Query 150986 CCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCT 151045
|| ||| |||||||| | | ||||| ||||| || ||||||||||| || ||||| ||
Sbjct 15960513 CCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACT 15960572
Query 151046 TCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGG 151105
||| || ||||| ||||||| || || || |||||||| || ||| | ||||| |||
Sbjct 15960573 TCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGG 15960632
Query 151106 CTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTATCTATGCT 151165
| ||||| || ||||||| | || |||| | |||||| | ||||| | | |
Sbjct 15960633 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGT 15960692
Query 151166 TACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGC-GT 151224
|| ||||||||||||||||||||| || ||| ||||||||||||| ||||| ||| ||
Sbjct 15960693 TATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGT 15960751
Query 151225 TGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCA 151284
|||||| || ||||| ||||| ||||| | || || ||| | | || ||| | |||||
Sbjct 15960752 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCA 15960811
Query 151285 AGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGT 151344
||| ||||||||||| ||||| | || || ||||| || ||||||| ||| ||||
Sbjct 15960812 AGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGT 15960871
Query 151345 CTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGT 151404
||||| |||||||| ||||| || ||||| || || || ||| | ||||| ||||||||
Sbjct 15960872 ATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGT 15960931
Query 151405 CTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 151464
||||| || || || ||| || ||||| ||||| |||| || ||| || | |
Sbjct 15960932 ATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 15960991
Query 151465 TGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 151524
|| ||||| |||||||| || || | ||||||| || |||||||| ||||||||
Sbjct 15960992 GGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGAC 15961051
Query 151525 CTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTT 151584
|| || || || ||||| || ||||| ||||| || | ||||||||||| ||| ||
Sbjct 15961052 TTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 15961111
Query 151585 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 151644
||||| || ||||| | ||||||||| | || || |||||||| || || || |||||
Sbjct 15961112 TAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTT 15961171
Query 151645 CACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 151704
|||||| | ||| | || || ||||| ||||| || ||||| ||||| |||||||| ||
Sbjct 15961172 CACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATC 15961231
Query 151705 CATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAGG 151764
| | ||| | || || || | || || ||||| || | | ||||||||
Sbjct 15961232 TGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAA 15961291
Query 151765 TCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGC 151824
||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 15961292 TCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 15961351
Query 151825 T 151825
|
Sbjct 15961352 T 15961352
>seq7
Length=26479886
Score = 621 bits (688), Expect = 4e-173
Identities = 716/961 (75%), Gaps = 2/961 (0%)
Strand=Plus/Plus
Query 150866 AACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACC 150925
|||||||| || |||| ||||||||||| ||||||| || || | ||| | |||||
Sbjct 22562212 AACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 22562271
Query 150926 ATTTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 150985
| || || | || ||||||||||| || || || || || ||||| || |||||
Sbjct 22562272 TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAG 22562331
Query 150986 CCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCT 151045
|| ||| |||||||| | | ||||| ||||| || ||||||||||| || ||||| ||
Sbjct 22562332 CCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACT 22562391
Query 151046 TCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGG 151105
||| || ||||| ||||||| || || || |||||||| || ||| | ||||| |||
Sbjct 22562392 TCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGG 22562451
Query 151106 CTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTATCTATGCT 151165
| ||||| || ||||||| | || |||| | |||||| | ||||| | | |
Sbjct 22562452 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGT 22562511
Query 151166 TACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGC-GT 151224
|| ||||||||||||||||||||| || ||| ||||||||||||| ||||| ||| ||
Sbjct 22562512 TATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGT 22562570
Query 151225 TGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCA 151284
|||||| || ||||| ||||| ||||| | || || ||| | | || ||| | |||||
Sbjct 22562571 TGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATTTACCCTATTGGTCA 22562630
Query 151285 AGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGT 151344
||| ||||||||||| ||||| | || || ||||| || ||||||| ||| ||||
Sbjct 22562631 AGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGT 22562690
Query 151345 CTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGT 151404
||||| |||||||| ||||| || ||||| || || || ||| | ||||| ||||||||
Sbjct 22562691 ATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGT 22562750
Query 151405 CTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 151464
||||| || || || ||| || ||||| ||||| |||| || ||| || | |
Sbjct 22562751 ATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 22562810
Query 151465 TGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 151524
|| ||||| |||||||| || || | ||||||| || |||||||| ||||||||
Sbjct 22562811 GGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGAC 22562870
Query 151525 CTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTT 151584
|| || || || ||||| || ||||| ||||| || | ||||||||||| ||| ||
Sbjct 22562871 TTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 22562930
Query 151585 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 151644
||||| || ||||| | ||||||||| | || || |||||||| || || || |||||
Sbjct 22562931 TAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTT 22562990
Query 151645 CACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 151704
|||||| | ||| | || || ||||| ||||| || ||||| ||||| |||||||| ||
Sbjct 22562991 CACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATC 22563050
Query 151705 CATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAGG 151764
| | ||| | || || || | || || ||||| || | | ||||||||
Sbjct 22563051 TGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAA 22563110
Query 151765 TCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGC 151824
||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 22563111 TCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 22563170
Query 151825 T 151825
|
Sbjct 22563171 T 22563171
Score = 158 bits (174), Expect = 1e-33
Identities = 204/282 (72%), Gaps = 0/282 (0%)
Strand=Plus/Plus
Query 150866 AACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACC 150925
|||||||| || |||| ||||||||||| ||||||| || || | ||| | |||||
Sbjct 22561888 AACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 22561947
Query 150926 ATTTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 150985
| || || | || ||||||||||| || || || || || |||| || ||||
Sbjct 22561948 TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGATATTCGTGGG 22562007
Query 150986 CCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCT 151045
| ||| |||||||| | | ||||| ||||| || ||||||||||| || ||||| ||
Sbjct 22562008 CATGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACT 22562067
Query 151046 TCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGG 151105
||| || ||||| || |||| || || || |||||||| || ||| | ||||| |||
Sbjct 22562068 TCTGCGGCGATCGGATTGAACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGG 22562127
Query 151106 CTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTC 151147
| ||||| || ||||||| | || |||| | ||||||
Sbjct 22562128 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 22562169
>seq5
Length=25164199
Score = 159 bits (176), Expect = 4e-34
Identities = 189/256 (74%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 153001 GCAAACACTTTCAAAGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACT 153060
||||| || ||| ||||| || ||||||| ||||| || ||||| || || ||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 153061 GCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCAT 153120
||||| || || |||||||| || ||||| |||||||| ||||||||| ||| | |||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 153121 TTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGT 153180
||||||||||| |||||||| || | ||| |||| | ||||||| | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 153181 CTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGAT 153240
|| ||||| || || ||||| || || || || || || ||||| | || ||||||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 153241 CCTGAATTTGAGACGT 153256
||||||||||||||||
Sbjct 21599375 CCTGAATTTGAGACGT 21599390
>seq3
Length=46202548
Score = 96.9 bits (106), Expect = 4e-15
Identities = 123/168 (73%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 151637 ATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTC 151696
|| ||||||||||| | ||| | || || ||||| ||||| || ||||| ||||| |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 151697 AACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAAC 151756
||||| || | | ||| | || || || | | || ||||| || | | |||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 151757 CGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAAC 151804
|||||| ||| | ||||||||| |||||||| |||||||||||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
>seq6
Length=30401905
Score = 93.3 bits (102), Expect = 5e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 153181 CTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGAT 153240
|| ||||| || | |||| || || || || | ||||||| | | || ||||| ||
Sbjct 9625634 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAGAACAT 9625693
Query 153241 CCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGG 153300
|||||||||||||| |||| || || ||||| ||||| ||||| || ||||||| |||
Sbjct 9625694 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 9625753
Query 153301 TTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGA 153360
|| | || || | ||| ||| || | | |||||||| ||||| | |||||
Sbjct 9625754 ATGATAACTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGT 9625813
Query 153361 GGCAAC 153366
|| |||
Sbjct 9625814 GGAAAC 9625819
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549555840727360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |