Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq6 232 8e-55
seq1 141 1e-27
seq5 138 1e-26
seq3 132 6e-25
seq8 120 4e-21
seq9 109 7e-18
seq7 102 1e-15
seq8217 89.7 6e-12
seq2475 87.8 2e-11
>seq6
Length=30401905
Score = 232 bits (256), Expect = 8e-55
Identities = 250/326 (77%), Gaps = 4/326 (1%)
Strand=Plus/Plus
Query 868678 GGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCC 868737
|||| |||| |||||| ||| ||||| |||||| |||||| ||||||||||||||
Sbjct 1929366 GGACATGACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCC 1929425
Query 868738 CTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGC 868796
|| || ||||| | ||||||||| ||||||||| |||| | ||||| ||| | ||
Sbjct 1929426 CTGCAGGGAGATGAGCTCCATCCAGTCGAACGGGTT-GGCGACGTTGTACATCTTCTTGC 1929484
Query 868797 ATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGG 868856
| ||||||| | |||||| ||||||||||| |||||||||||||||| |||||| ||
Sbjct 1929485 ACCCGAGCGCCATGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGC 1929544
Query 868857 CGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGA 868916
||||||| |||| |||||| || || |||| |||| || ||||| ||||||| || |
Sbjct 1929545 CGTTCATCCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCA 1929604
Query 868917 CGGCCTCGACGATGATCTGCCTGGGCACGT-CGGCCGAGGGCTTGTTGACGAGCATCGTG 868975
|||| ||| ||| ||||| ||||| | ||| | | | ||||| | ||| | |
Sbjct 1929605 CGGCGTCGGCGACGATCT-CCTGGACGCGTGCCTCGTCGAGCTTGCCGCGGAGGAGGTCG 1929663
Query 868976 TAGAGCAGGCAGGCAAAGTCGCAGTG 869001
||||| |||||||| |||||||||||
Sbjct 1929664 TAGAGGAGGCAGGCGAAGTCGCAGTG 1929689
Score = 232 bits (256), Expect = 8e-55
Identities = 250/323 (77%), Gaps = 6/323 (2%)
Strand=Plus/Minus
Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743
|||| |||||| ||| ||||| |||||| |||||| |||||||||||||||| ||
Sbjct 11443151 GACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAG 11443092
Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGA 868802
||||| | ||||||||| ||| ||||||| || | ||||| ||| | ||| ||||
Sbjct 11443091 GGAGATGAGCTCCATCCAGTCGAAGGGGTTGG-CGACGTTGTACATCTTCTTGCAGCCGA 11443033
Query 868803 GCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCA 868862
||| | ||| |||||||||||||| |||||||||||||||| ||||||| || ||||||
Sbjct 11443032 GCGCCATGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCA 11442973
Query 868863 TGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCT 868922
|||||| |||||| || || |||| |||| || ||||| ||||||| |||||||| |
Sbjct 11442972 TGCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGT 11442913
Query 868923 CGACGATGATCTGCCTGGGCACGTCGGC-CG-AGGGCTTGTTGACGAGCATCGTGTAGAG 868980
|| ||| ||||| | || | || || | || | ||||| | ||| | ||||||
Sbjct 11442912 CGGCGACGATCT-CGCGGACGCG-CGCCTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAG 11442855
Query 868981 CAGGCAGGCAAAGTCGCAGTGCA 869003
|||||||| |||||||||||||
Sbjct 11442854 GAGGCAGGCGAAGTCGCAGTGCA 11442832
Score = 210 bits (232), Expect = 3e-48
Identities = 215/277 (78%), Gaps = 3/277 (1%)
Strand=Plus/Plus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
||||||||||||||||||||||||||||||| ||||| ||||| | | |||| || || |
Sbjct 1929971 CCGAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGGCGCGCGCCTCGGCGACCT 1930030
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| || || |||||||| | ||| ||||||||| ||||||||| ||| ||| ||||
Sbjct 1930031 GCACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCATCGGAGGCCGCGA 1930090
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC-GTCG-CTGAGCGAC-ACCCAGT 869807
| || || || ||||| || |||||||||||||| | || | | ||| | ||||||
Sbjct 1930091 AGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGGCGACAGCGCGGCGTCCCAGT 1930150
Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867
|| | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| |
Sbjct 1930151 GGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCT 1930210
Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904
|||| | |||||| | ||| |||| | ||| |||||
Sbjct 1930211 TGTAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 1930247
Score = 199 bits (220), Expect = 5e-45
Identities = 215/285 (75%), Gaps = 6/285 (2%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| |||||||| ||| | |||||| |||| |||||| |||||||| |||||||||
Sbjct 1929694 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTTC 1929753
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| |||
Sbjct 1929754 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 1929813
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359
||| |||||||||||| ||| ||| ||| || |||||| ||| ||||||
Sbjct 1929814 GCGACGAGCCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCATCGCATGGCCCAG 1929867
Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419
|||||||| | ||| | || || |||||||||||||| |||||| ||||||| |||
Sbjct 1929868 TCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 1929927
Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464
| ||| || || || |||| ||| ||||| || |||||
Sbjct 1929928 ACGTCGTCGCGGATGTACGTCTCGAGCAGCAGCGAGTACATCTCC 1929972
Score = 188 bits (208), Expect = 9e-42
Identities = 212/284 (75%), Gaps = 6/284 (2%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| |||||||| ||| | |||||| |||| |||||| |||||||| || ||||||
Sbjct 11442829 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTC 11442770
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| |||
Sbjct 11442769 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 11442710
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359
||| ||| |||||||| ||| ||| ||| || |||||| ||| ||||||
Sbjct 11442709 GCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAG 11442656
Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419
|||||||| | ||| | ||| || |||||||||||||| || || |||||| |||
Sbjct 11442655 TCGGCCTTGCGGCGCACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCTGTCCTTCTCG 11442596
Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
|| ||| || ||||| |||| ||| ||||| || ||||
Sbjct 11442595 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTC 11442552
Score = 168 bits (186), Expect = 8e-36
Identities = 209/279 (75%), Gaps = 9/279 (3%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
||||||||||||||||||||||||||||| ||||| ||||| | | |||| || || ||
Sbjct 11442550 GAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGGCGCGCCCCTCGGCGACCTGC 11442491
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGG-TTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751
|| || |||||||| | ||| ||| |||||| ||||||||| ||| |||||||||
Sbjct 11442490 ACGTCGGACATGAACCTGGAGGCGAGGTTTCTCGAGCACGATGCCATCGGAGGCGGCGAA 11442431
Query 869752 AAAAGCCAGGACGT-GCTTGATAAAGT-GGCGCTCGTCGTCG----CTGAGCGAC-ACCC 869804
|| || || |||| | ||| |||| ||||| ||| | | | ||| | |||
Sbjct 11442430 GAAGGCGAGCACGTGGGGAGATGAAGTGGGCGCCTCTCGGGGGGAACAGCGCGGCGTCCC 11442371
Query 869805 AGTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864
||||| | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||
Sbjct 11442370 AGTGGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCT 11442311
Query 869865 TTTTGTACATCTCCCATACTTGC-TGGTAGCGGATAGGG 869902
| ||||| | |||||| | ||| |||| | ||| |||
Sbjct 11442310 TCTTGTAGAACTCCCAGATCTGCGGGGTACCTGATCGGG 11442272
>seq1
Length=43445878
Score = 141 bits (156), Expect = 1e-27
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| ||||||||||||||| | | ||
Sbjct 2953642 GCTTGGCAAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2953701
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| || | || || | ||||||||| | ||| |||| |
Sbjct 2953702 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2953761
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| || |||||||||| ||||| | |||| ||||||||| | ||||||||
Sbjct 2953762 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2953821
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 2953822 GGACCTGCTTGAGCACCTTGAAGATG 2953847
Score = 136 bits (150), Expect = 5e-26
Identities = 156/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| ||||||||||||||| | | ||
Sbjct 15561848 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 15561789
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461
| ||| |||||| || | || || ||| ||||||| ||| ||| ||||
Sbjct 15561788 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 15561730
Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
|||||||||| || |||||||||| |||||| | |||| ||||||||| | ||| |||
Sbjct 15561729 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCCGGG 15561670
Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548
||||||||||| || |||||| |||||
Sbjct 15561669 TGCACCTGCTTCAGGACCTTGAAGATG 15561643
Score = 132 bits (146), Expect = 6e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||||||||||||||||||| | | ||
Sbjct 2993519 GCTTGGCAAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGA 2993460
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| || | || || | ||| |||| ||| |||| |
Sbjct 2993459 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCGCCAGCGAGCTTCTCGAAGA 2993400
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| || |||||||||| ||||| | |||| ||||||||| | ||||||||
Sbjct 2993399 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2993340
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 2993339 GGACCTGCTTGAGCACCTTGAAGATG 2993314
Score = 129 bits (142), Expect = 7e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| ||| ||||||||||| | | ||
Sbjct 2986473 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTTTGGATCTCGCGGGAGGTGA 2986414
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| || | || || | ||| ||| | ||| |||| |
Sbjct 2986413 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2986354
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| || |||||||||| |||||| | |||| ||||||||| | ||||||||
Sbjct 2986353 TGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2986294
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 2986293 GGACCTGCTTGAGCACCTTGAAGATG 2986268
Score = 123 bits (136), Expect = 3e-22
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || |||||||| | ||||||||||||||| | | ||
Sbjct 33290746 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGA 33290805
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||| || | || |||||| ||||||| | ||| |||| |
Sbjct 33290806 TGGTCGGCTTCTTGTTGTAGCGGGCGAGACGGGCGGCCTCCTGGGCGAGCTTCTCGAAGA 33290865
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| ||||||| ||||||||||||| |||||| | |||| ||||| || | ||||| |
Sbjct 33290866 TATCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGACGAGATCCCGATATCGGGAT 33290925
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
||||||||||||| |||||| | |||
Sbjct 33290926 GCACCTGCTTGAGGACCTTGAAAATG 33290951
Score = 120 bits (132), Expect = 4e-21
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| |||||||||||| || | | ||
Sbjct 3041069 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGTGAGGTGA 3041010
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| || |||| || | ||| ||| | ||| |||| |
Sbjct 3041009 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 3040950
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| || |||| || |||||||||| ||||| | |||| ||||||||| | ||||||||
Sbjct 3040949 TATCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 3040890
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 3040889 GGACCTGCTTGAGCACCTTGAAGATG 3040864
Score = 120 bits (132), Expect = 4e-21
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| |||||||||||| || | | ||
Sbjct 3165443 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 3165502
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| || | || || | ||| ||| | ||| |||| |
Sbjct 3165503 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 3165562
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||| |||| || |||||||||| ||||| | |||| ||||||||| | ||||||||
Sbjct 3165563 TGTCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 3165622
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 3165623 GAACCTGCTTGAGCACCTTGAAGATG 3165648
Score = 118 bits (130), Expect = 1e-20
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 1254351 AGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTG 1254410
|| |||| | | | || ||||| |||||||||||||||||||| | | ||| |||
Sbjct 3021378 AGCTCGCTGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGATGGTGGGT 3021319
Query 1254411 CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTG 1254470
|||||| || | || || | ||| ||| | ||| |||| || ||||||
Sbjct 3021318 TTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGATATCGTTG 3021259
Query 1254471 ACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1254530
| || |||||||||| |||||| | |||| ||||||||| | ||||||||| ||||||
Sbjct 3021258 ATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGC 3021199
Query 1254531 TTGAGCACCTTGTAGATG 1254548
|| ||||||||| |||||
Sbjct 3021198 TTCAGCACCTTGAAGATG 3021181
Score = 102 bits (112), Expect = 1e-15
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | | ||||| || |||||||||||||| || | | ||
Sbjct 2965393 GCTTGGCAAGCTCGCCGGGGAGAACGAGGCGAACAGCGGTCTGGATCTCCCGGGAGGTGA 2965334
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| || | || || | ||| ||| ||| || | |
Sbjct 2965333 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCAGCGAGCTTCTCAAAGA 2965274
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| || |||||||||| ||||| | ||| |||||||| | ||||||||
Sbjct 2965273 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTAGAAGAGATGCCGATGTCGGGGT 2965214
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| |||||||||||||||||| |||||
Sbjct 2965213 GGACCTGCTTGAGCACCTTGAAGATG 2965188
Score = 87.8 bits (96), Expect = 2e-11
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457
|||| |||||| | |||||| ||||||||||||||||||||||| ||||| | |
Sbjct 37225530 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 37225589
Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493
||| |||| || ||| ||||||||||||||||||
Sbjct 37225590 CGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGACAAG 37225625
>seq5
Length=25164199
Score = 138 bits (152), Expect = 1e-26
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| ||||||||||||||| | | ||
Sbjct 24364894 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 24364835
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| || | || || | ||||||||| | ||| |||| |
Sbjct 24364834 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 24364775
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| || |||||||||| ||||| | |||| ||||||||| | ||||||||
Sbjct 24364774 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 24364715
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| ||||||||||| |||||| |||||
Sbjct 24364714 GGACCTGCTTGAGAACCTTGAAGATG 24364689
Score = 100 bits (110), Expect = 3e-15
Identities = 148/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || || || || | ||||||||||||||| | | ||
Sbjct 18585715 GCTTGGCGAGCTCGCCGGGGAGGACGAGACGAACAGAGGTCTGGATCTCGCGGGAGGTGA 18585656
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461
| ||| |||||| | || || | | ||||||| ||| ||| ||||
Sbjct 18585655 TGGTGGGCTTCTTGTTGTACCTGGCGAGCCTGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 18585597
Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
||||| |||| || || ||||||| ||||| | |||| |||||| || | ||| ||
Sbjct 18585596 ATGTCATTGATGAAGGAATTCATGATGGACATGGCCTTGGAGGAGATCCCTATGTCCGGA 18585537
Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548
||||||||||||||||||||| |||||
Sbjct 18585536 TGCACCTGCTTGAGCACCTTGAAGATG 18585510
Score = 86.0 bits (94), Expect = 8e-11
Identities = 100/133 (75%), Gaps = 3/133 (2%)
Strand=Plus/Plus
Query 1178221 GGCCGCCGCCGGCGTGGCCTATTTGCACGGGCGCGA-CCGGC--CGATCGTGCACCGCGA 1178277
||||||||||| |||| || | |||| ||| ||||| ||||||||||||||||
Sbjct 22994815 GGCCGCCGCCGCGCTGGCGTACCTCCACGCCGTCGAGCCGGCGCCGATCGTGCACCGCGA 22994874
Query 1178278 CCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGTGGCCGACTTTGG 1178337
| ||||| | |||| | ||| |||||| ||||||| ||||||| |||||||| ||
Sbjct 22994875 CGTCAAGACCAACAACATCCTCCTCGACGCCAACTTCCACGTCAAGGTCGCCGACTTCGG 22994934
Query 1178338 CTTTGCCCGCATC 1178350
| | ||||| ||
Sbjct 22994935 CCTCTCCCGCCTC 22994947
>seq3
Length=46202548
Score = 132 bits (146), Expect = 6e-25
Identities = 155/207 (75%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| ||||||||||||||| | | ||
Sbjct 12882072 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 12882013
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461
| ||| |||||| || | || || ||| ||||||| ||| ||| ||||
Sbjct 12882012 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 12881954
Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521
|||||||||| || |||||||||| |||||| | |||| |||||| || | ||| |||
Sbjct 12881953 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATTCCGATGTCCGGG 12881894
Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548
||||||||||| || |||||| |||||
Sbjct 12881893 TGCACCTGCTTCAGGACCTTGAAGATG 12881867
Score = 98.7 bits (108), Expect = 1e-14
Identities = 100/130 (77%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCAC---GGTCTCGACCCGCCCATCGTGCACCGCGACC 1349488
||||||||| | |||| ||||||||| | | ||||||||||| |||||||||
Sbjct 9078141 CGGCCAAGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACA 9078200
Query 1349489 TCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCC 1349548
||||| | ||||| | ||| ||||||| | |||||| |||||| |||||||| || |
Sbjct 9078201 TCAAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTCGCCGACTTCGGGC 9078260
Query 1349549 TGGCGCGCAT 1349558
|| |||||||
Sbjct 9078261 TGTCGCGCAT 9078270
Score = 93.3 bits (102), Expect = 5e-13
Identities = 97/125 (78%), Gaps = 2/125 (2%)
Strand=Plus/Plus
Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666
||| ||||||||||| |||||||| |||||| |||||||||||||| | ||||||||
Sbjct 3325036 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 3325095
Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725
||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| |
Sbjct 3325096 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 3325154
Query 1347726 CACCG 1347730
| |||
Sbjct 3325155 CGCCG 3325159
Score = 93.3 bits (102), Expect = 5e-13
Identities = 97/125 (78%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666
||| ||||||||||| |||||||| |||||| |||||||||||||| | ||||||||
Sbjct 25626276 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 25626217
Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725
||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| |
Sbjct 25626216 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 25626158
Query 1347726 CACCG 1347730
| |||
Sbjct 25626157 CGCCG 25626153
Score = 91.5 bits (100), Expect = 2e-12
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 1572461 TCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGG 1572520
||||||| || ||| ||||| || | || || || || ||||| ||||| ||||
Sbjct 8091016 TCGATGATCATCTGCGCGATCCGGTCGCCGGGCTTCACGGCGAAGTCGGTGTCGGAGTGG 8090957
Query 1572521 TTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACG 1572580
|||||||| | ||| |||||| ||| || |||||||| ||||| || || ||||| |||
Sbjct 8090956 TTGAAGAGGATGACCCCCACCGGGCCACGGTAGTCGGCGTCGATCACCCCGGCGCCCACG 8090897
Query 1572581 TCGAT 1572585
|||||
Sbjct 8090896 TCGAT 8090892
>seq8
Length=23026653
Score = 120 bits (132), Expect = 4e-21
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||| || |||||| | | || ||||| |||| |||||||||||| | | | ||
Sbjct 20320275 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGA 20320216
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| |||||| | || || | |||||||| | ||| |||| |
Sbjct 20320215 TGGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 20320156
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||| ||||||||||||| |||||| | |||| |||||| || | ||| ||||
Sbjct 20320155 TGTCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGAGGAGATCCCGATGTCCGGGT 20320096
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
||||||||||||| |||||| |||||
Sbjct 20320095 GCACCTGCTTGAGGACCTTGAAGATG 20320070
>seq9
Length=22605696
Score = 109 bits (120), Expect = 7e-18
Identities = 93/115 (81%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||||| ||||||||| |||||||| |||| || ||| ||| || |||| || ||
Sbjct 17074899 GCCGCGAACTACCTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGAC 17074840
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||| ||| | || |||||||||||||||||||| ||||||||| |||
Sbjct 17074839 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 17074785
Score = 105 bits (116), Expect = 8e-17
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || ||||||||| |||||||| ||||| ||||| ||| || | ||||| ||
Sbjct 19669771 GCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 19669830
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||| ||| | || |||||||||||||||||||| |||||||||
Sbjct 19669831 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAG 19669881
Score = 95.1 bits (104), Expect = 1e-13
Identities = 96/123 (78%), Gaps = 3/123 (2%)
Strand=Plus/Plus
Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486
|||||| ||| | || || | ||||| |||| |||| ||||||||||||||||||||
Sbjct 13228476 GTCGGCCGCC--GCGC-TCACGTACCTCCACGCCATCGAGCCGCCCATCGTGCACCGCGA 13228532
Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546
| |||||| | |||| | || ||||| ||| | |||||||||| |||||||||||
Sbjct 13228533 CGTCAAGACCACCAACATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTTGG 13228592
Query 1349547 CCT 1349549
|||
Sbjct 13228593 CCT 13228595
>seq7
Length=26479886
Score = 102 bits (112), Expect = 1e-15
Identities = 125/168 (74%), Gaps = 7/168 (4%)
Strand=Plus/Minus
Query 1592131 GTGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187
||||||| | || || ||||| | || ||| | ||||||| || | ||| ||
Sbjct 22693713 GTGGGACGAAGACTTCGTCGACGAGCTGGACCAGAACGCCCTCTTCGATGTCATCGCGGC 22693654
Query 1592188 CGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||||||||||||||||||| | ||||| ||||| || |||||| || ||| ||
Sbjct 22693653 CGCCAACTACCTCGACATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGAC 22693596
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
| ||||||||||||| | |||||||||||||||||| || ||||||
Sbjct 22693595 ACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 22693548
Score = 100 bits (110), Expect = 3e-15
Identities = 124/167 (74%), Gaps = 7/167 (4%)
Strand=Plus/Minus
Query 1592132 TGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCC 1592188
|||||| | || || ||||| | || ||| | ||||||| || | ||| |||
Sbjct 22691308 TGGGACGAAGACTTCGTCGACGAGCTGGACCAGAACGCCCTCTTCGATGTCATCGCGGCC 22691249
Query 1592189 GCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACA 1592246
|||||||||||||||||| | ||||| ||||| || |||||| || ||| |||
Sbjct 22691248 GCCAACTACCTCGACATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGACA 22691191
Query 1592247 TGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
||||||||||||| | |||||||||||||||||| || ||||||
Sbjct 22691190 CGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 22691144
>seq8217
Length=772
Score = 89.7 bits (98), Expect = 6e-12
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 1254467 GTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCAC 1254526
||||| || |||||||||| ||||| | |||| ||||||||| | ||||||||| ||
Sbjct 772 GTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGAAC 713
Query 1254527 CTGCTTGAGCACCTTGTAGATG 1254548
|||||||||||||||| |||||
Sbjct 712 CTGCTTGAGCACCTTGAAGATG 691
>seq2475
Length=3741
Score = 87.8 bits (96), Expect = 2e-11
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457
|||| |||||| | |||||| ||||||||||||||||||||||| ||||| | |
Sbjct 1306 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 1365
Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493
||| |||| || ||| ||||||||||||||||||
Sbjct 1366 CGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGACAAG 1401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106344157351096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |