Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 232 8e-55 seq1 141 1e-27 seq5 138 1e-26 seq3 132 6e-25 seq8 120 4e-21 seq9 109 7e-18 seq7 102 1e-15 seq8217 89.7 6e-12 seq2475 87.8 2e-11 >seq6 Length=30401905 Score = 232 bits (256), Expect = 8e-55 Identities = 250/326 (77%), Gaps = 4/326 (1%) Strand=Plus/Plus Query 868678 GGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCC 868737 |||| |||| |||||| ||| ||||| |||||| |||||| |||||||||||||| Sbjct 1929366 GGACATGACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCC 1929425 Query 868738 CTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGC 868796 || || ||||| | ||||||||| ||||||||| |||| | ||||| ||| | || Sbjct 1929426 CTGCAGGGAGATGAGCTCCATCCAGTCGAACGGGTT-GGCGACGTTGTACATCTTCTTGC 1929484 Query 868797 ATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGG 868856 | ||||||| | |||||| ||||||||||| |||||||||||||||| |||||| || Sbjct 1929485 ACCCGAGCGCCATGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGC 1929544 Query 868857 CGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGA 868916 ||||||| |||| |||||| || || |||| |||| || ||||| ||||||| || | Sbjct 1929545 CGTTCATCCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCA 1929604 Query 868917 CGGCCTCGACGATGATCTGCCTGGGCACGT-CGGCCGAGGGCTTGTTGACGAGCATCGTG 868975 |||| ||| ||| ||||| ||||| | ||| | | | ||||| | ||| | | Sbjct 1929605 CGGCGTCGGCGACGATCT-CCTGGACGCGTGCCTCGTCGAGCTTGCCGCGGAGGAGGTCG 1929663 Query 868976 TAGAGCAGGCAGGCAAAGTCGCAGTG 869001 ||||| |||||||| ||||||||||| Sbjct 1929664 TAGAGGAGGCAGGCGAAGTCGCAGTG 1929689 Score = 232 bits (256), Expect = 8e-55 Identities = 250/323 (77%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| |||||| ||| ||||| |||||| |||||| |||||||||||||||| || Sbjct 11443151 GACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAG 11443092 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGA 868802 ||||| | ||||||||| ||| ||||||| || | ||||| ||| | ||| |||| Sbjct 11443091 GGAGATGAGCTCCATCCAGTCGAAGGGGTTGG-CGACGTTGTACATCTTCTTGCAGCCGA 11443033 Query 868803 GCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCA 868862 ||| | ||| |||||||||||||| |||||||||||||||| ||||||| || |||||| Sbjct 11443032 GCGCCATGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCA 11442973 Query 868863 TGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCT 868922 |||||| |||||| || || |||| |||| || ||||| ||||||| |||||||| | Sbjct 11442972 TGCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGT 11442913 Query 868923 CGACGATGATCTGCCTGGGCACGTCGGC-CG-AGGGCTTGTTGACGAGCATCGTGTAGAG 868980 || ||| ||||| | || | || || | || | ||||| | ||| | |||||| Sbjct 11442912 CGGCGACGATCT-CGCGGACGCG-CGCCTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAG 11442855 Query 868981 CAGGCAGGCAAAGTCGCAGTGCA 869003 |||||||| ||||||||||||| Sbjct 11442854 GAGGCAGGCGAAGTCGCAGTGCA 11442832 Score = 210 bits (232), Expect = 3e-48 Identities = 215/277 (78%), Gaps = 3/277 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||| ||||| ||||| | | |||| || || | Sbjct 1929971 CCGAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGGCGCGCGCCTCGGCGACCT 1930030 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||||||| | ||| ||||||||| ||||||||| ||| ||| |||| Sbjct 1930031 GCACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCATCGGAGGCCGCGA 1930090 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC-GTCG-CTGAGCGAC-ACCCAGT 869807 | || || || ||||| || |||||||||||||| | || | | ||| | |||||| Sbjct 1930091 AGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGGCGACAGCGCGGCGTCCCAGT 1930150 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 || | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| | Sbjct 1930151 GGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCT 1930210 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||| | |||||| | ||| |||| | ||| ||||| Sbjct 1930211 TGTAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 1930247 Score = 199 bits (220), Expect = 5e-45 Identities = 215/285 (75%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| |||||||| ||||||||| Sbjct 1929694 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTTC 1929753 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| ||| Sbjct 1929754 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 1929813 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| |||||||||||| ||| ||| ||| || |||||| ||| |||||| Sbjct 1929814 GCGACGAGCCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCATCGCATGGCCCAG 1929867 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | ||| | || || |||||||||||||| |||||| ||||||| ||| Sbjct 1929868 TCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 1929927 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | ||| || || || |||| ||| ||||| || ||||| Sbjct 1929928 ACGTCGTCGCGGATGTACGTCTCGAGCAGCAGCGAGTACATCTCC 1929972 Score = 188 bits (208), Expect = 9e-42 Identities = 212/284 (75%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| |||||||| || |||||| Sbjct 11442829 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTC 11442770 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| ||| Sbjct 11442769 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 11442710 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| |||||||| ||| ||| ||| || |||||| ||| |||||| Sbjct 11442709 GCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAG 11442656 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | ||| | ||| || |||||||||||||| || || |||||| ||| Sbjct 11442655 TCGGCCTTGCGGCGCACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCTGTCCTTCTCG 11442596 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||| || ||||| |||| ||| ||||| || |||| Sbjct 11442595 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTC 11442552 Score = 168 bits (186), Expect = 8e-36 Identities = 209/279 (75%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||| ||||| ||||| | | |||| || || || Sbjct 11442550 GAGTGGATGTTCTCGATGGCGATCTGGAACCCGTAGAAGGCGCGCCCCTCGGCGACCTGC 11442491 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGG-TTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751 || || |||||||| | ||| ||| |||||| ||||||||| ||| ||||||||| Sbjct 11442490 ACGTCGGACATGAACCTGGAGGCGAGGTTTCTCGAGCACGATGCCATCGGAGGCGGCGAA 11442431 Query 869752 AAAAGCCAGGACGT-GCTTGATAAAGT-GGCGCTCGTCGTCG----CTGAGCGAC-ACCC 869804 || || || |||| | ||| |||| ||||| ||| | | | ||| | ||| Sbjct 11442430 GAAGGCGAGCACGTGGGGAGATGAAGTGGGCGCCTCTCGGGGGGAACAGCGCGGCGTCCC 11442371 Query 869805 AGTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCT 869864 ||||| | ||||||| ||||||||||||||| || ||||||| ||| ||| | |||| Sbjct 11442370 AGTGGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCT 11442311 Query 869865 TTTTGTACATCTCCCATACTTGC-TGGTAGCGGATAGGG 869902 | ||||| | |||||| | ||| |||| | ||| ||| Sbjct 11442310 TCTTGTAGAACTCCCAGATCTGCGGGGTACCTGATCGGG 11442272 >seq1 Length=43445878 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2953642 GCTTGGCAAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2953701 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 2953702 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2953761 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2953762 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2953821 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2953822 GGACCTGCTTGAGCACCTTGAAGATG 2953847 Score = 136 bits (150), Expect = 5e-26 Identities = 156/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 15561848 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 15561789 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| || | || || ||| ||||||| ||| ||| |||| Sbjct 15561788 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 15561730 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || |||||||||| |||||| | |||| ||||||||| | ||| ||| Sbjct 15561729 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCCGGG 15561670 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||| || |||||| ||||| Sbjct 15561669 TGCACCTGCTTCAGGACCTTGAAGATG 15561643 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||||||||||||||||||| | | || Sbjct 2993519 GCTTGGCAAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGA 2993460 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| |||| ||| |||| | Sbjct 2993459 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCGCCAGCGAGCTTCTCGAAGA 2993400 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2993399 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2993340 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2993339 GGACCTGCTTGAGCACCTTGAAGATG 2993314 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||| ||||||||||| | | || Sbjct 2986473 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTTTGGATCTCGCGGGAGGTGA 2986414 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2986413 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2986354 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| |||||| | |||| ||||||||| | |||||||| Sbjct 2986353 TGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2986294 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2986293 GGACCTGCTTGAGCACCTTGAAGATG 2986268 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || |||||||| | ||||||||||||||| | | || Sbjct 33290746 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGA 33290805 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || |||||| ||||||| | ||| |||| | Sbjct 33290806 TGGTCGGCTTCTTGTTGTAGCGGGCGAGACGGGCGGCCTCCTGGGCGAGCTTCTCGAAGA 33290865 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| ||||||||||||| |||||| | |||| ||||| || | ||||| | Sbjct 33290866 TATCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGACGAGATCCCGATATCGGGAT 33290925 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| |||||| | ||| Sbjct 33290926 GCACCTGCTTGAGGACCTTGAAAATG 33290951 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 3041069 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGTGAGGTGA 3041010 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | ||| ||| | ||| |||| | Sbjct 3041009 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 3040950 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 3040949 TATCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 3040890 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 3040889 GGACCTGCTTGAGCACCTTGAAGATG 3040864 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 3165443 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 3165502 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 3165503 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 3165562 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 3165563 TGTCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 3165622 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 3165623 GAACCTGCTTGAGCACCTTGAAGATG 3165648 Score = 118 bits (130), Expect = 1e-20 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 1254351 AGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTG 1254410 || |||| | | | || ||||| |||||||||||||||||||| | | ||| ||| Sbjct 3021378 AGCTCGCTGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGATGGTGGGT 3021319 Query 1254411 CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTG 1254470 |||||| || | || || | ||| ||| | ||| |||| || |||||| Sbjct 3021318 TTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGATATCGTTG 3021259 Query 1254471 ACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1254530 | || |||||||||| |||||| | |||| ||||||||| | ||||||||| |||||| Sbjct 3021258 ATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGC 3021199 Query 1254531 TTGAGCACCTTGTAGATG 1254548 || ||||||||| ||||| Sbjct 3021198 TTCAGCACCTTGAAGATG 3021181 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | | ||||| || |||||||||||||| || | | || Sbjct 2965393 GCTTGGCAAGCTCGCCGGGGAGAACGAGGCGAACAGCGGTCTGGATCTCCCGGGAGGTGA 2965334 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| ||| || | | Sbjct 2965333 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCAGCGAGCTTCTCAAAGA 2965274 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| |||||||| | |||||||| Sbjct 2965273 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTAGAAGAGATGCCGATGTCGGGGT 2965214 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2965213 GGACCTGCTTGAGCACCTTGAAGATG 2965188 Score = 87.8 bits (96), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457 |||| |||||| | |||||| ||||||||||||||||||||||| ||||| | | Sbjct 37225530 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 37225589 Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493 ||| |||| || ||| |||||||||||||||||| Sbjct 37225590 CGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGACAAG 37225625 >seq5 Length=25164199 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 24364894 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 24364835 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 24364834 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 24364775 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 24364774 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 24364715 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||||||||||| |||||| ||||| Sbjct 24364714 GGACCTGCTTGAGAACCTTGAAGATG 24364689 Score = 100 bits (110), Expect = 3e-15 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || || || || | ||||||||||||||| | | || Sbjct 18585715 GCTTGGCGAGCTCGCCGGGGAGGACGAGACGAACAGAGGTCTGGATCTCGCGGGAGGTGA 18585656 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| | || || | | ||||||| ||| ||| |||| Sbjct 18585655 TGGTGGGCTTCTTGTTGTACCTGGCGAGCCTGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 18585597 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 ||||| |||| || || ||||||| ||||| | |||| |||||| || | ||| || Sbjct 18585596 ATGTCATTGATGAAGGAATTCATGATGGACATGGCCTTGGAGGAGATCCCTATGTCCGGA 18585537 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||||||||| ||||| Sbjct 18585536 TGCACCTGCTTGAGCACCTTGAAGATG 18585510 Score = 86.0 bits (94), Expect = 8e-11 Identities = 100/133 (75%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 1178221 GGCCGCCGCCGGCGTGGCCTATTTGCACGGGCGCGA-CCGGC--CGATCGTGCACCGCGA 1178277 ||||||||||| |||| || | |||| ||| ||||| |||||||||||||||| Sbjct 22994815 GGCCGCCGCCGCGCTGGCGTACCTCCACGCCGTCGAGCCGGCGCCGATCGTGCACCGCGA 22994874 Query 1178278 CCTCAAGTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGTGGCCGACTTTGG 1178337 | ||||| | |||| | ||| |||||| ||||||| ||||||| |||||||| || Sbjct 22994875 CGTCAAGACCAACAACATCCTCCTCGACGCCAACTTCCACGTCAAGGTCGCCGACTTCGG 22994934 Query 1178338 CTTTGCCCGCATC 1178350 | | ||||| || Sbjct 22994935 CCTCTCCCGCCTC 22994947 >seq3 Length=46202548 Score = 132 bits (146), Expect = 6e-25 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 12882072 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 12882013 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| || | || || ||| ||||||| ||| ||| |||| Sbjct 12882012 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 12881954 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || |||||||||| |||||| | |||| |||||| || | ||| ||| Sbjct 12881953 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATTCCGATGTCCGGG 12881894 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||| || |||||| ||||| Sbjct 12881893 TGCACCTGCTTCAGGACCTTGAAGATG 12881867 Score = 98.7 bits (108), Expect = 1e-14 Identities = 100/130 (77%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCAC---GGTCTCGACCCGCCCATCGTGCACCGCGACC 1349488 ||||||||| | |||| ||||||||| | | ||||||||||| ||||||||| Sbjct 9078141 CGGCCAAGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACA 9078200 Query 1349489 TCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCC 1349548 ||||| | ||||| | ||| ||||||| | |||||| |||||| |||||||| || | Sbjct 9078201 TCAAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTCGCCGACTTCGGGC 9078260 Query 1349549 TGGCGCGCAT 1349558 || ||||||| Sbjct 9078261 TGTCGCGCAT 9078270 Score = 93.3 bits (102), Expect = 5e-13 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||| |||||||||||||| | |||||||| Sbjct 3325036 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 3325095 Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725 ||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| | Sbjct 3325096 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 3325154 Query 1347726 CACCG 1347730 | ||| Sbjct 3325155 CGCCG 3325159 Score = 93.3 bits (102), Expect = 5e-13 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||| |||||||||||||| | |||||||| Sbjct 25626276 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 25626217 Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725 ||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| | Sbjct 25626216 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 25626158 Query 1347726 CACCG 1347730 | ||| Sbjct 25626157 CGCCG 25626153 Score = 91.5 bits (100), Expect = 2e-12 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 1572461 TCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGG 1572520 ||||||| || ||| ||||| || | || || || || ||||| ||||| |||| Sbjct 8091016 TCGATGATCATCTGCGCGATCCGGTCGCCGGGCTTCACGGCGAAGTCGGTGTCGGAGTGG 8090957 Query 1572521 TTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACG 1572580 |||||||| | ||| |||||| ||| || |||||||| ||||| || || ||||| ||| Sbjct 8090956 TTGAAGAGGATGACCCCCACCGGGCCACGGTAGTCGGCGTCGATCACCCCGGCGCCCACG 8090897 Query 1572581 TCGAT 1572585 ||||| Sbjct 8090896 TCGAT 8090892 >seq8 Length=23026653 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| | | | || Sbjct 20320275 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGA 20320216 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | || || | |||||||| | ||| |||| | Sbjct 20320215 TGGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 20320156 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | |||| |||||| || | ||| |||| Sbjct 20320155 TGTCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGAGGAGATCCCGATGTCCGGGT 20320096 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| |||||| ||||| Sbjct 20320095 GCACCTGCTTGAGGACCTTGAAGATG 20320070 >seq9 Length=22605696 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| ||||||||| |||||||| |||| || ||| ||| || |||| || || Sbjct 17074899 GCCGCGAACTACCTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGAC 17074840 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 17074839 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 17074785 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||| |||||||| ||||| ||||| ||| || | ||||| || Sbjct 19669771 GCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 19669830 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| Sbjct 19669831 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAG 19669881 Score = 95.1 bits (104), Expect = 1e-13 Identities = 96/123 (78%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486 |||||| ||| | || || | ||||| |||| |||| |||||||||||||||||||| Sbjct 13228476 GTCGGCCGCC--GCGC-TCACGTACCTCCACGCCATCGAGCCGCCCATCGTGCACCGCGA 13228532 Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546 | |||||| | |||| | || ||||| ||| | |||||||||| ||||||||||| Sbjct 13228533 CGTCAAGACCACCAACATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTTGG 13228592 Query 1349547 CCT 1349549 ||| Sbjct 13228593 CCT 13228595 >seq7 Length=26479886 Score = 102 bits (112), Expect = 1e-15 Identities = 125/168 (74%), Gaps = 7/168 (4%) Strand=Plus/Minus Query 1592131 GTGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187 ||||||| | || || ||||| | || ||| | ||||||| || | ||| || Sbjct 22693713 GTGGGACGAAGACTTCGTCGACGAGCTGGACCAGAACGCCCTCTTCGATGTCATCGCGGC 22693654 Query 1592188 CGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||||||| | ||||| ||||| || |||||| || ||| || Sbjct 22693653 CGCCAACTACCTCGACATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGAC 22693596 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||||| | |||||||||||||||||| || |||||| Sbjct 22693595 ACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 22693548 Score = 100 bits (110), Expect = 3e-15 Identities = 124/167 (74%), Gaps = 7/167 (4%) Strand=Plus/Minus Query 1592132 TGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCC 1592188 |||||| | || || ||||| | || ||| | ||||||| || | ||| ||| Sbjct 22691308 TGGGACGAAGACTTCGTCGACGAGCTGGACCAGAACGCCCTCTTCGATGTCATCGCGGCC 22691249 Query 1592189 GCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACA 1592246 |||||||||||||||||| | ||||| ||||| || |||||| || ||| ||| Sbjct 22691248 GCCAACTACCTCGACATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGACA 22691191 Query 1592247 TGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||||| | |||||||||||||||||| || |||||| Sbjct 22691190 CGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 22691144 >seq8217 Length=772 Score = 89.7 bits (98), Expect = 6e-12 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 1254467 GTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCAC 1254526 ||||| || |||||||||| ||||| | |||| ||||||||| | ||||||||| || Sbjct 772 GTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGAAC 713 Query 1254527 CTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||| ||||| Sbjct 712 CTGCTTGAGCACCTTGAAGATG 691 >seq2475 Length=3741 Score = 87.8 bits (96), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457 |||| |||||| | |||||| ||||||||||||||||||||||| ||||| | | Sbjct 1306 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 1365 Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493 ||| |||| || ||| |||||||||||||||||| Sbjct 1366 CGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGACAAG 1401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106344157351096