Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq6 95.1 1e-14 >seq6 Length=30401905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| || | |||||||| |||||||| | || ||| || Sbjct 26902857 ATGCAGATTTTTGTCAAGACCCTGACCGGCAAGACCATTACGCTTGAGGTTGAGTCTTCT 26902916 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | | || || |||||| ||||| || || | ||| ||| || Sbjct 26902917 GATACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAG 26902976 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| || || ||||| ||||||| | || |||| ||||||||| Sbjct 26902977 CAGCGCCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGACGCACCCTGGCTGATTACAAC 26903036 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| || || || || |||||| ||||| Sbjct 26903037 ATTCAGAAGGAGTCCACCTTGCACCTGGTG 26903066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412792854760184