Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq6 242 6e-58
seq1 196 8e-44
seq5 192 9e-43
seq3 187 4e-41
seq8 174 2e-37
seq9 96.9 5e-14
seq7 95.1 2e-13
>seq6
Length=30401905
Score = 242 bits (268), Expect = 6e-58
Identities = 248/324 (77%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| |||||| |||||||| |||||||||
Sbjct 1929694 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTTC 1929753
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| ||||||||| ||||| ||||||||| ||| |||
Sbjct 1929754 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 1929813
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
|||||||||||||||| || || ||| || |||||| ||| |||||
Sbjct 1929814 GCGACGAGCCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCATCGCATGGCCCAG 1929867
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
|| ||||| | ||| | ||| || |||||||||||||| |||||| |||||||||||
Sbjct 1929868 TCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 1929927
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
|| ||| || ||| || |||| || |||||||| |||| ||||||||||| |||
Sbjct 1929928 ACGTCGTCGCGGATGTACGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCG 1929987
Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664
|||||||||||||| || || |||
Sbjct 1929988 ATGGCGATCTGGAACCCGTAGAAG 1930011
Score = 232 bits (256), Expect = 1e-54
Identities = 251/328 (77%), Gaps = 6/328 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||| |||||| || ||||| |||||| |||||| |||||||||||||||| |
Sbjct 1929371 TGACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCA 1929430
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCC 794008
| ||||| | ||||||||| |||||||||||| ||| ||| ||||| ||||||
Sbjct 1929431 GGGAGATGAGCTCCATCCAGTCGAACGGGTTGGCGACGT--TGTACATCTTCTTGCACCC 1929488
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
||||| | ||||| |||||||||||||| || |||||||||| |||||| || ||||
Sbjct 1929489 GAGCGCCATGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGCCGTT 1929548
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
||| |||| |||||| ||||| |||| |||| ||| ||||| ||||||| || |||||
Sbjct 1929549 CATCCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACGGC 1929608
Query 794129 CTCGATGATGATCTGCCTGGGCACGTCGGACGACG-GCTTGTCGACGAGCATCGTGTAGA 794187
||| || ||||| ||||| | ||| || || ||||| || ||| | |||||
Sbjct 1929609 GTCGGCGACGATCT-CCTGGACGCGTGCCTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGA 1929667
Query 794188 GCAGGCAGGCAAAGTCGCAATGCAGACC 794215
| |||||||| |||||||| || || ||
Sbjct 1929668 GGAGGCAGGCGAAGTCGCAGTGGAGGCC 1929695
Score = 232 bits (256), Expect = 1e-54
Identities = 255/335 (76%), Gaps = 6/335 (2%)
Strand=Plus/Minus
Query 793884 CTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTG 793943
||||| ||||| |||||| || ||||| |||||| |||||| ||||||||||||
Sbjct 11443159 CTCGACATGACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTG 11443100
Query 793944 CCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCT 794001
|||| || ||||| | ||||||||| ||| |||||||| ||| ||| |||||
Sbjct 11443099 CCCTGCAGGGAGATGAGCTCCATCCAGTCGAAGGGGTTGGCGACGTT--GTACATCTTCT 11443042
Query 794002 CGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGG 794061
||| ||||||| | || ||||||||||||||||| || |||||||||| |||||||
Sbjct 11443041 TGCAGCCGAGCGCCATGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGT 11442982
Query 794062 CGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCT 794121
|| |||||||||||| |||||| ||||| |||| |||| ||| ||||| ||||||| |
Sbjct 11442981 CGCCGTTCATGCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGT 11442922
Query 794122 CGACGGCCTCGATGATGATCTGCCTGGGCACGTCGGACGACG-GCTTGTCGACGAGCATC 794180
||||||| ||| || ||||| | || | || || || ||||| || ||| |
Sbjct 11442921 CGACGGCGTCGGCGACGATCT-CGCGGACGCGCGCCTCGTCGAGCTTGCCGCGGAGGAGG 11442863
Query 794181 GTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215
|||||| |||||||| |||||||| ||||| ||
Sbjct 11442862 TCGTAGAGGAGGCAGGCGAAGTCGCAGTGCAGGCC 11442828
Score = 215 bits (238), Expect = 8e-50
Identities = 242/324 (75%), Gaps = 6/324 (2%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| |||||||| ||| | |||||| ||| |||||| |||||||| || ||||||
Sbjct 11442829 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTC 11442770
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| |||||||| ||||| ||||||||| ||||| ||||||||| ||| |||
Sbjct 11442769 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 11442710
Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520
||||||| |||||||| || || ||| || |||||| ||| |||||
Sbjct 11442709 GCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAG 11442656
Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580
|| ||||| | ||| | || || |||||||||||||| || || ||||||||||
Sbjct 11442655 TCGGCCTTGCGGCGCACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCTGTCCTTCTCG 11442596
Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640
| ||| || |||||| |||| || |||||||| |||| ||||||||||| |||
Sbjct 11442595 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTCGGAGTGGATGTTCTCG 11442536
Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664
|||||||||||||| || || |||
Sbjct 11442535 ATGGCGATCTGGAACCCGTAGAAG 11442512
>seq1
Length=43445878
Score = 196 bits (216), Expect = 8e-44
Identities = 189/240 (79%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 15561887 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 15561828
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 15561827 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 15561768
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
| || |||||| ||||||| ||| ||| |||| |||||||||| || ||||||
Sbjct 15561767 GGGCGAGGCGGGCGGCCTC-CTGCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTC 15561709
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||||||||| | ||| ||||||||| | ||| |||||||||||||| || ||||||
Sbjct 15561708 ATGATCGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTCAGGACCTTG 15561649
Score = 188 bits (208), Expect = 1e-41
Identities = 185/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| || |||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 2953603 TGAACTTGGTCACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCAAGCTCGCCGGGGA 2953662
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 2953663 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 2953722
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||||| | ||| |||| |||||||||| || |||||||
Sbjct 2953723 GGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 2953782
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 2953783 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 2953841
Score = 188 bits (208), Expect = 1e-41
Identities = 185/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 2993558 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCAAGCTCGCCGGGGA 2993499
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||||||||||||||||||||| | ||| ||| |||||| ||
Sbjct 2993498 GGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 2993439
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||| |||| ||| |||| |||||||||| || |||||||
Sbjct 2993438 GGGCGAGCTTGGCGGACTCGCCAGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 2993379
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 2993378 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 2993320
Score = 183 bits (202), Expect = 5e-40
Identities = 184/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 2986512 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 2986453
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||| ||||||||||||| | ||| ||| |||||| ||
Sbjct 2986452 GGACGAGGCGGACGGAGGTTTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 2986393
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||| ||| | ||| |||| |||||||||| || |||||||
Sbjct 2986392 GGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 2986333
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||||||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 2986332 TGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 2986274
Score = 181 bits (200), Expect = 2e-39
Identities = 186/243 (77%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 33290707 TGAACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 33290766
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| |||||||| | ||||||||||||||||| | ||| || |||||| ||
Sbjct 33290767 GGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGTCGGCTTCTTGTTGTAGC 33290826
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || ||| ||||||| | ||| |||| || ||||||| ||||||||||
Sbjct 33290827 GGGCGAGACGGGCGGCCTCCTGGGCGAGCTTCTCGAAGATATCGTTGATGAACGAGTTCA 33290886
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||||||||| | ||| ||||| || | ||||| |||||||||||||| ||||||
Sbjct 33290887 TGATCGACATGGCCTTGGACGAGATCCCGATATCGGGATGCACCTGCTTGAGGACCTTGA 33290946
Query 1485710 AAA 1485712
|||
Sbjct 33290947 AAA 33290949
Score = 165 bits (182), Expect = 1e-34
Identities = 177/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 1485475 TTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATC 1485534
|| |||||||||||||| ||||| |||||||||||| |||| || |||||| | | ||
Sbjct 3165409 TTAGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACG 3165468
Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594
||||| |||| |||||||||||| |||| | ||| ||| |||||| ||| ||
Sbjct 3165469 AGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGCGGGCG 3165528
Query 1485595 AGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATC 1485654
|| | ||| ||| | ||| |||| ||||| |||| || |||||||||||
Sbjct 3165529 AGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGATGTCATTGATGAAGGAGTTCATGATG 3165588
Query 1485655 GACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 3165589 GACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGAACCTGCTTGAGCACCTTG 3165642
Score = 161 bits (178), Expect = 2e-33
Identities = 179/239 (75%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| || |||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 3041108 TGAACTTGGTCACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 3041049
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| || | | ||| ||| |||||| ||
Sbjct 3041048 GGACGAGGCGGACGGAGGTCTGGATCTCCCGTGAGGTGATGGTGGGCTTCTTGTTGTAGC 3040989
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||| || | ||| ||| | ||| |||| || || |||| || |||||||
Sbjct 3040988 GCGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGATATCATTGATGAAGGAGTTCA 3040929
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| ||||||||||||||||||
Sbjct 3040928 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 3040870
Score = 156 bits (172), Expect = 7e-32
Identities = 178/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 2965432 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCAAGCTCGCCGGGGA 2965373
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| ||||| || |||||||||||||| |||| | ||| ||| |||||| ||
Sbjct 2965372 GAACGAGGCGAACAGCGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 2965313
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||| ||| ||| || | |||||||||| || |||||||
Sbjct 2965312 GGGCGAGCTTGGCGGACTCTCCAGCGAGCTTCTCAAAGATGTCGTTGATGAAGGAGTTCA 2965253
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | || |||||||| | ||||||||| ||||||||||||||||||
Sbjct 2965252 TGATGGACATGGCCTTAGAAGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTG 2965194
Score = 116 bits (128), Expect = 6e-20
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 1485517 AGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTG 1485576
|| |||| | | | || ||||| |||||||||||||||||||||| | ||| |||
Sbjct 3021378 AGCTCGCTGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGATGGTGGGT 3021319
Query 1485577 CGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTG 1485636
|||||| ||| || || | ||| ||| | ||| |||| || ||||||
Sbjct 3021318 TTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGATATCGTTG 3021259
Query 1485637 ACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696
| || ||||||||||||||||| | ||| ||||||||| | ||||||||| ||||||
Sbjct 3021258 ATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGC 3021199
Query 1485697 TTGAGCACCTTG 1485708
|| |||||||||
Sbjct 3021198 TTCAGCACCTTG 3021187
Score = 87.8 bits (96), Expect = 3e-11
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 1433483 GGGCTTCCGCCCGACCAGCAGCGTCTCCTTTATGCGGGCCAGCAGATGGAAGACGGTCGC 1433542
||| | ||||| ||||||||||| ||| | | || ||| ||||| |||| ||||| |||
Sbjct 21648200 GGGATCCCGCCGGACCAGCAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 21648141
Query 1433543 CGGCTGGCCGACTATGCCATCCGCGCCGAGGCGTCAATGCATCTGGTGCTCAGGCTACGC 1433602
|||||||||||| ||||| ||| || | |||| ||||||||| | || |||
Sbjct 21648140 ACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGC 21648081
Query 1433603 GGCGGC 1433608
||||||
Sbjct 21648080 GGCGGC 21648075
>seq5
Length=25164199
Score = 192 bits (212), Expect = 9e-43
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 24364933 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 24364874
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 24364873 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 24364814
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| || || | ||||||||| | ||| |||| |||||||||| || |||||||
Sbjct 24364813 GGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 24364754
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||||| | ||| ||||||||| | ||||||||| ||||||||||| ||||||
Sbjct 24364753 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGAACCTTG 24364695
Score = 156 bits (172), Expect = 7e-32
Identities = 180/240 (75%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 18585754 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 18585695
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || || || | ||||||||||||||||| | ||| ||| |||||| |
Sbjct 18585694 GGACGAGACGAACAGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 18585635
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| || | | ||||||| ||| ||| |||| ||||| |||| || || |||
Sbjct 18585634 TGGCGAGCCTGGCGGCCTC-CTGCGCGAGCTTCTCGAAGATGTCATTGATGAAGGAATTC 18585576
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||||| | ||| |||||| || | ||| || |||||||||||||||||||||
Sbjct 18585575 ATGATGGACATGGCCTTGGAGGAGATCCCTATGTCCGGATGCACCTGCTTGAGCACCTTG 18585516
Score = 86.0 bits (94), Expect = 1e-10
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 1433481 CAGGGCTTCCGCCCGACCAGCAGCGTCTCCTTTATGCGGGCCAGCAGATGGAAGACGGTC 1433540
||||| | ||||| || |||||||| ||| | | ||||| ||||| |||| ||||| |
Sbjct 18416630 CAGGGATCCCGCCGGATCAGCAGCGGCTCATCTTCGCGGGGAAGCAGCTGGAGGACGGCC 18416571
Query 1433541 GCCGGCTGGCCGACTATGCCATCCGCGCCGAGGCGTCAATGCATCTGGTGCTCAGGCTAC 1433600
|| |||||||||||| ||||| ||| || | | || ||||||||| | || |
Sbjct 18416570 GCACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGCCTCC 18416511
Query 1433601 GCGGCGGCGG 1433610
||||||||||
Sbjct 18416510 GCGGCGGCGG 18416501
>seq3
Length=46202548
Score = 187 bits (206), Expect = 4e-41
Identities = 187/240 (78%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||| |||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 12882111 TGAACTTGGTGACCGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 12882052
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| ||||||||||||||||| | ||| ||| |||||| ||
Sbjct 12882051 GGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 12881992
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
| || |||||| ||||||| ||| ||| |||| |||||||||| || ||||||
Sbjct 12881991 GGGCGAGGCGGGCGGCCTC-CTGCGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTC 12881933
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||||||||| | ||| |||||| || | ||| |||||||||||||| || ||||||
Sbjct 12881932 ATGATCGACATGGCCTTGGAGGAGATTCCGATGTCCGGGTGCACCTGCTTCAGGACCTTG 12881873
>seq8
Length=23026653
Score = 174 bits (192), Expect = 2e-37
Identities = 182/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||||||||||||||| ||||| |||||||||||| |||| || |||||| | |
Sbjct 20320314 TGAACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 20320255
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| ||||| |||| |||||||||||| | || | ||| ||| |||||| |
Sbjct 20320254 GGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTACC 20320195
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|| || | |||||||| | ||| |||| |||||||||| ||||||||||
Sbjct 20320194 TGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAACGAGTTCA 20320135
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||||||||| | ||| |||||| || | ||| ||||||||||||||||| ||||||
Sbjct 20320134 TGATCGACATGGCCTTGGAGGAGATCCCGATGTCCGGGTGCACCTGCTTGAGGACCTTG 20320076
Score = 89.7 bits (98), Expect = 8e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| |||||||||||||||||| |||||| |||||||| ||| |||| || | |||| | |
Sbjct 20317252 TGAACTTGGTGACGGCCTTGGCACCCTCAGAGACGGCATGCTTGGCGAGCTTGCCGAGGA 20317193
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573
|| ||||| || | |||||||||||| | || | ||| |||
Sbjct 20317192 GGACGAGGCGGACAGAGGTCTGGATCTCCCTGGAGGTGATGGTG 20317149
>seq9
Length=22605696
Score = 96.9 bits (106), Expect = 5e-14
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| || ||||||||| |||||||| || || ||| || ||| |||||||||| ||
Sbjct 19669771 GCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 19669830
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| |||||||| ||| | || ||||| |||||||||||||| |||||||||
Sbjct 19669831 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAG 19669881
Score = 96.9 bits (106), Expect = 5e-14
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||| |||| |||||||||||| ||||| |||| |||||| |||| || |||||| | |
Sbjct 21881421 GTAGTTGGAGACGGCCTTGGTGCCCTCGGAGATGGCGTGGTTGGCGAGGTCGCCGGGGAG 21881480
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC- 1485589
|| ||||| ||||||| ||||| |||||||| | || ||| ||| | || ||
Sbjct 21881481 GACGAGGCGGACGGCGGACTGGACCTCGCGGGAGGTGAGGGTGAGGCGGCCG-GAGAGCT 21881539
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| ||||| ||||||| | ||| || |||| ||||||| | | | || |
Sbjct 21881540 TGGAGAGGCGAGAGGCCTCGTCGGCGAGACGCTCGAACATGTCGGCCATCATCATGTCGA 21881599
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704
|| ||| | || | || | ||||| ||| |||||||||||||| |||||
Sbjct 21881600 GGACGTCCATGGTTTGGGCGGTGGCGCCCAAGTCAGGGTGCACCTGCTTCAGCAC 21881654
Score = 87.8 bits (96), Expect = 3e-11
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1249580 TATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGCAACCTGCTG 1249639
|| || ||||| |||| |||||| |||| |||||||| |||||| || |||| | ||
Sbjct 13228495 TACCTCCACGCCATCGAGCCGCCCATCGTGCACCGCGACGTCAAGACCACCAACATCCTC 13228554
Query 1249640 GTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCATC 1249690
|||||| ||| | | | |||||||| ||||||||||| ||| | ||| ||
Sbjct 13228555 CTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTTGGCCTCTCCCGCCTC 13228605
>seq7
Length=26479886
Score = 95.1 bits (104), Expect = 2e-13
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 2035610 CGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAA 2035669
|||| | ||||| | ||||||| || | ||| ||||||||||||||||||||| |
Sbjct 22691288 CGAGCTGGACCAGAACGCCCTCTTCGATGTCATCGCGGCCGCCAACTACCTCGACATCGA 22691229
Query 2035670 GCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGA 2035729
||||||||| | ||||||| || ||| || |||||||||||| | |||||
Sbjct 22691228 TGGCCTCCTCGACCTCACCTGCAAGAGGGTCGCCGACACGATCAAGGGCAAGACCCCCGA 22691169
Query 2035730 GGACATCCGCAAGACCTTTAACATC 2035754
||| ||||||||| || ||||||
Sbjct 22691168 GGAGATCCGCAAGGAGTTCAACATC 22691144
Score = 95.1 bits (104), Expect = 2e-13
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 2035610 CGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAA 2035669
|||| | ||||| | ||||||| || | ||| ||||||||||||||||||||| |
Sbjct 22693692 CGAGCTGGACCAGAACGCCCTCTTCGATGTCATCGCGGCCGCCAACTACCTCGACATCGA 22693633
Query 2035670 GCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGA 2035729
||||||||| | ||||||| || ||| || |||||||||||| | |||||
Sbjct 22693632 TGGCCTCCTCGACCTCACCTGCAAGAGGGTCGCCGACACGATCAAGGGCAAGACCCCCGA 22693573
Query 2035730 GGACATCCGCAAGACCTTTAACATC 2035754
||| ||||||||| || ||||||
Sbjct 22693572 GGAGATCCGCAAGGAGTTCAACATC 22693548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915215843253032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |