Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 8e-12 >seq6 Length=30401905 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/189 (71%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 201567 CGTATACCAGAAATTGGAGATAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGG 201625 ||||||||| | ||||| ||||| ||| || | || |||| | | ||||||||| || Sbjct 7711565 CGTATACCACAGATTGGGGATAAGTTTAGTAGTAGGCATGGTC-AGAAAGGAACTGTGGG 7711507 Query 201626 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCG--GGTATGACCCCGGATATT 201683 |||| |||| ||||||| || ||||||| || || | || || || || |||||| Sbjct 7711506 AATGACTTATACACAAGAGGACATGCCGTGGACT--ATTGAAGGCATCACACCTGATATT 7711449 Query 201684 ATAATCAATCCAAATTGTATACCATCAAGAATGACCATAAATCAAATAATTGCAACTGTT 201743 || | |||||| || ||| ||||| | ||||| || ||| | |||| | || Sbjct 7711448 ATTGTGAATCCACATGCTATTCCATCCCGTATGACTATTGGTCAGCTGATTGAGTGTATT 7711389 Query 201744 ATGGGTAAA 201752 ||||||||| Sbjct 7711388 ATGGGTAAA 7711380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655200645592000