Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq6 372 4e-97 seq1 163 4e-34 seq5 158 2e-32 seq3 158 2e-32 seq8 140 5e-27 seq9 89.7 7e-12 >seq6 Length=30401905 Score = 372 bits (412), Expect = 4e-97 Identities = 424/562 (75%), Gaps = 14/562 (2%) Strand=Plus/Minus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| ||| | |||| || ||| ||||| | ||| || ||||| | ||| || || Sbjct 1930249 TGTTCCCGATCAGGTACCCGCAGATCTGGGAGTTCTAC-AAGAAGGCGGTGGCGTCGTTC 1930191 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGC 1455869 ||||| || |||||||| |||||| ||||||| || |||||||| | |||| Sbjct 1930190 TGGACGGCGGAGGAGGTGGACCTCTCCGCCGACGCGCGCCACTGGGACGCCGCGCTGTCG 1930131 Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929 |||||||||||| ||| || ||||| |||||||| || ||| ||| ||||||||| Sbjct 1930130 CCCGACGAGCGCCACTTCGTCTCCCACGTGCTCGCCTTCTT-CGCGGCCTCCGATGGCAT 1930072 Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989 |||| ||||||||| ||| | | || ||| || || || | | ||||| || Sbjct 1930071 CGTGCTCGAGAACCTCGCCTCCAGGTTCATGTCCGACGTGCAGGTCGCCGAGGCGCGCGC 1930012 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 || ||||||||||||||||||||||| ||||||||||| || | |||||||| ||| | Sbjct 1930011 CTTCTACGGGTTCCAGATCGCCATCGAGAACATCCACTCGGAGATGTACTCGCTGCTGCT 1929952 Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGT 1456109 ||| || ||| || ||| ||||||||||||| |||||| |||||||||||||| || Sbjct 1929951 CGAGACGTACATCCGCGACGACGTCGAGAAGGACCGCCTCTTCCGCGCCATCGACACCGT 1929892 Query 1456110 GCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGA 1456169 || | ||| | |||||||||||||| ||| |||||| || ||| ||| Sbjct 1929891 CCCCGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATC------GACGGCGGCGA 1929838 Query 1456170 -CACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAG 1456227 | ||| |||||||||||||||| ||| ||| |||||||||| ||||| ||||||||| Sbjct 1929837 GCGCTTCGCCGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTC 1929778 Query 1456228 TTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCA 1456287 |||||||||||||| ||||||||||||||||| |||||| |||| | || ||| || Sbjct 1929777 CTTCTGCGCCATCTTCTGGCTCAAGAAGCGCGGACTCATG-CCGGGCCTCACCTTCTCCA 1929719 Query 1456288 ACGAATTTATCAGTCGCGACGA 1456309 |||| | ||| |||||||| Sbjct 1929718 ACGAGCTCATCTCCCGCGACGA 1929697 Score = 318 bits (352), Expect = 8e-81 Identities = 443/606 (73%), Gaps = 21/606 (3%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCC-ATCCGCTACCA-GC 1455773 |||||||||||| ||| || | ||||| |||||||| ||| | |||| || Sbjct 11442230 GAGCCGCTGCTGGCGGATTCGTCGGAGCGCTTCTCGATGTTCCCCGATCAGGTACCCCGC 11442289 Query 1455774 GGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGAC 1455833 ||| ||||| | ||| || ||||| | ||| || || ||||| || |||||||| ||| Sbjct 11442290 AGATCTGGGAGTTCTAC-AAGAAGGCGGTGGCGTCGTTCTGGACGGCGGAGGAGGTGGAC 11442348 Query 1455834 CTCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGAC--GACGAGCGCC-ATTTC 1455887 ||| ||||||| || |||||||| | |||| | | || ||||| | ||| Sbjct 11442349 CTCTCCGCCGACGCGCGCCACTGGGACGCCGCGCTGTTCCCCCCGAGAGGCGCCCACTTC 11442408 Query 1455888 ATCAAGC-ACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAA-CCTG 1455945 ||| | |||| |||||||| || ||||||| ||||||||||||| |||||| ||| Sbjct 11442409 ATCTCCCCACGTGCTCGCCTTCTT-CGCCGCCTCCGATGGCATCGTGCTCGAGAAACCTC 11442467 Query 1455946 GCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAG 1456005 ||| | | || ||| || || || | | |||| || || |||||||||||| Sbjct 11442468 GCCTCCAGGTTCATGTCCGACGTGCAGGTCGCCGAGGGGCGCGCCTTCTACGGGTTCCAG 11442527 Query 1456006 ATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAG 1456065 ||||||||||| ||||||||||| || | |||||||| ||| |||| |||||| || Sbjct 11442528 ATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTGCTGCTCGAGACCTACATCCGC 11442587 Query 1456066 GACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 ||| | |||||||||| || || |||||||||||||| || ||| | ||| | Sbjct 11442588 GACGGCGCCGAGAAGGACAGGCTGTTCCGCGCCATCGACACCGTCCCGGCCGTGCGCCGC 11442647 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGA-CACTTTGCCGAGCGG 1456184 |||||||||||||| ||| |||||| || ||| ||| | ||| |||||||| Sbjct 11442648 AAGGCCGACTGGGCCATGCGCTGGATC------GACGGCGGCGAGCGCTTCGCCGAGCGC 11442701 Query 1456185 CTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTT 1456243 ||||||| ||| ||| |||||||||| ||||| ||||||||| |||||||||||||| Sbjct 11442702 CTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGCCATCTTC 11442761 Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCG 1456303 |||||||||||||| || |||||| |||| | || ||| |||||| | ||| || Sbjct 11442762 TGGCTCAAGAAGCGGGGGCTCATG-CCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCG 11442820 Query 1456304 CGACGA 1456309 |||||| Sbjct 11442821 CGACGA 11442826 Score = 197 bits (218), Expect = 2e-44 Identities = 246/327 (75%), Gaps = 10/327 (3%) Strand=Plus/Plus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGACCGAC 1456510 ||||||| ||||| ||||| || |||||| | ||| | ||||| || ||| | Sbjct 11442832 TGCACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACGAGGCGC 11442891 Query 1456511 GTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570 | | || | ||||| ||| ||| |||||||| ||||||| ||||| ||| |||| || Sbjct 11442892 GCGTCCGCG-AGATCGTCGCCGACGCCGTCGACATCGAGAGGGAGTTCGTCTGCGACGCG 11442950 Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 || || || |||||| |||||||||||| | | |||||| |||||||||| | | || | Sbjct 11442951 CTCCCCGTCGCGCTCGTCGGCATGAACGGCGAC-CTCATGAGCCAGTACATCG-AGTTCG 11443008 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGC--GGAGAAGCACTACCGGACGGCCAACC 1456688 ||||||||||||| ||| ||||||||||||| | ||| | || || | | ||||||| Sbjct 11443009 TCGCCGACCGCCTCCTCATGGCGCTCGGCTGCAAGAAGATGTACAAC--GTC-GCCAACC 11443065 Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748 | ||| ||||||||| | ||||| || |||||||||||||||| |||||| |||| Sbjct 11443066 CCTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCG 11443125 Query 1456749 T-GGCGAGTACGCCAAGGCCGGCGTCA 1456774 | ||||| ||| ||||| ||||| Sbjct 11443126 TCGGCGACTACCAGAAGGCGTCCGTCA 11443152 Score = 194 bits (214), Expect = 2e-43 Identities = 244/325 (75%), Gaps = 10/325 (3%) Strand=Plus/Minus Query 1456454 CACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGACCGACGT 1456512 ||||| ||||| ||||| || |||||| | ||| | ||||| || ||| ||| Sbjct 1929689 CACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCGGCAAGCTCGACGAGGCACGC 1929630 Query 1456513 GCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCT 1456572 | ||| | ||||| ||| ||| ||||| || ||||||| ||||| ||| |||| |||| Sbjct 1929629 GTCCAGG-AGATCGTCGCCGACGCCGTGGACATCGAGAGGGAGTTCGTCTGCGACGCGCT 1929571 Query 1456573 GCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTC 1456632 || || |||||| |||| ||||||| | ||||||| |||||||||| || || ||| Sbjct 1929570 CCCCGTCGCGCTCGTCGGGATGAACGGCGA-GCTCATGAGCCAGTACATCGAGTTC-GTC 1929513 Query 1456633 GCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCCAACCCG 1456690 |||||||| |||||| ||||||||| ||| ||||| ||| ||| ||||||||| Sbjct 1929512 GCCGACCGGCTGCTCATGGCGCTCGGGTGCA-AGAAGATGTACA--ACGTCGCCAACCCG 1929456 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749 ||| ||||||||| | ||||| || |||||||||||||||| |||||| ||||| Sbjct 1929455 TTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTC 1929396 Query 1456750 GGCGAGTACGCCAAGGCCGGCGTCA 1456774 ||||| ||| ||||| ||||| Sbjct 1929395 GGCGACTACCAGAAGGCGTCCGTCA 1929371 >seq1 Length=43445878 Score = 163 bits (180), Expect = 4e-34 Identities = 178/232 (77%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||| |||||| || | | || |||| ||| |||| || Sbjct 2953846 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 2953793 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| | ||||||||| Sbjct 2953792 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCCGAGGCCGCC 2953733 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | ||||||||||||||| |||| Sbjct 2953732 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTC 2953673 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 2953672 CGCCTCGTCCTCCCCGGCGAGCTTGCCAAGCACGCCGTCTCCGAGGGCACCA 2953621 Score = 161 bits (178), Expect = 1e-33 Identities = 180/233 (77%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||| || |||||||||||||| || | | || |||| ||| |||| || Sbjct 15561644 ATCTTCAAGGTCCTGAAGCAGGTGCACCCG-GA--CATCGG--CATC-TCCTCCAAGGCC 15561697 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCGG 725029 ||||||||||||||||| || |||||||||| |||| ||| ||| ||||||| Sbjct 15561698 ATGTCGATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCGCAG-GAGGCCGC 15561756 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 ||||| || |||| ||||||| ||| ||| | | ||||||||||||||| |||| Sbjct 15561757 CCGCCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGT 15561816 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 15561817 CCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 15561869 Score = 154 bits (170), Expect = 2e-31 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||| |||||| || | | || |||| ||| |||| || Sbjct 2993315 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 2993368 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| |||| ||| Sbjct 2993369 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCTGGCGAGTCCGCC 2993428 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | |||||||||||||||||||| Sbjct 2993429 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCGCCGTC 2993488 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 2993489 CGCCTCGTCCTCCCCGGCGAGCTTGCCAAGCACGCCGTCTCCGAGGGCACCA 2993540 Score = 149 bits (164), Expect = 9e-30 Identities = 175/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||| |||||| || | | || |||| ||| |||| || Sbjct 2986269 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 2986322 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||||||||||||||| || |||||||||| |||| ||| | ||| ||| Sbjct 2986323 ATGTCGATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGGGAGTCCGCC 2986382 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | ||||||||||| ||| |||| Sbjct 2986383 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAAACCTCCGTC 2986442 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 2986443 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 2986494 Score = 140 bits (154), Expect = 5e-27 Identities = 173/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||| |||||| || | | || |||| ||| |||| || Sbjct 3040865 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 3040918 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||| || || |||| ||| | ||| ||| Sbjct 3040919 ATGTCCATCATGAACTCCTTCATCAATGATATCTTCGAGAAGCTCGCCGGGGAGTCCGCC 3040978 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| ||||||| ||| ||| | | || |||||||||||| |||| Sbjct 3040979 AAGCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCACGGGAGATCCAGACCTCCGTC 3041038 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 3041039 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 3041090 Score = 140 bits (154), Expect = 5e-27 Identities = 168/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724916 CAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATGTC 724975 |||||| |||||||||||||| ||| | || || || ||||| | ||||||| Sbjct 33290945 CAAGGTCCTCAAGCAGGTGCATCCCGATATCG---GGATCTCGTCCAA---GGCCATGTC 33290892 Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035 ||||||||||||||| ||||||| || |||| ||| | ||||||| || || Sbjct 33290891 GATCATGAACTCGTTCATCAACGATATCTTCGAGAAGCTCGCCCAGGAGGCCGCCCGTCT 33290832 Query 725036 GGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCT 725095 || |||| ||||||| || ||| | | ||||||||||||||| | |||||||| Sbjct 33290831 CGCCCGCTACAACAAGAAGCCGACCATCACCTCCCGCGAGATCCAGACCTCGGTGCGCCT 33290772 Query 725096 GATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | | |||||| || |||| |||||||||||| |||||||||| Sbjct 33290771 CGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCA 33290725 Score = 136 bits (150), Expect = 6e-26 Identities = 172/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||| |||||| || | | || |||| ||| |||| || Sbjct 3165647 ATCTTCAAGGTGCTCAAGCAGGTTCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 3165594 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||| ||||| |||| ||| | ||| ||| Sbjct 3165593 ATGTCCATCATGAACTCCTTCATCAATGACATCTTCGAGAAGCTCGCCGGAGAGTCCGCC 3165534 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | || |||||||||||| |||| Sbjct 3165533 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTC 3165474 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| |||||||||||| |||||||||| Sbjct 3165473 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCA 3165422 Score = 122 bits (134), Expect = 1e-21 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||| |||||| || | | || |||| || ||| || Sbjct 2965189 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCTTCTAAGGCC 2965242 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| | || ||| ||| ||| Sbjct 2965243 ATGTCCATCATGAACTCCTTCATCAACGACATCTTTGAGAAGCTCGCTGGAGAGTCCGCC 2965302 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | || |||||||||||||| || Sbjct 2965303 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCGCTGTT 2965362 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | | | |||||| || |||| ||||||||||||||||||||||| Sbjct 2965363 CGCCTCGTTCTCCCCGGCGAGCTTGCCAAGCACGCCGTCTCCGAGGGCACCA 2965414 Score = 102 bits (112), Expect = 1e-15 Identities = 147/203 (72%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||||| |||||||| |||||| || | | || |||| ||| |||| || Sbjct 3021182 ATCTTCAAGGTGCTGAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 3021235 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||||||||||||||| || ||||||| || |||| ||| | ||| ||| Sbjct 3021236 ATGTCGATCATGAACTCCTTCATCAACGATATCTTCGAGAAGCTCGCCGGAGAGTCCGCC 3021295 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | |||||||||||||||||||| Sbjct 3021296 AAGCTCGCCCGCTACAACAAGAAACCCACCATCACCTCCCGCGAGATCCAGACCGCCGTC 3021355 Query 725091 CGCCTGATCATGCGCGGCGAACT 725113 ||||| || | | | |||| || Sbjct 3021356 CGCCTCGTCCTCCCCAGCGAGCT 3021378 >seq5 Length=25164199 Score = 158 bits (174), Expect = 2e-32 Identities = 177/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||| ||||||||||| |||||| || | | || |||| ||| |||| || Sbjct 24364690 ATCTTCAAGGTTCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 24364743 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| | ||||||||| Sbjct 24364744 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCCGAGGCCGCC 24364803 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | ||||||||||||||| |||| Sbjct 24364804 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGTC 24364863 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 24364864 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 24364915 Score = 125 bits (138), Expect = 1e-22 Identities = 171/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||||||||||||||||| || || | | ||| |||||||| | || Sbjct 18585511 ATCTTCAAGGTGCTCAAGCAGGTGCATCCG-GA--CATAGGGATCTCCTCCAA---GGCC 18585564 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCGG 725029 ||||| |||||||| || || |||| ||||| |||| ||| ||| ||||||| Sbjct 18585565 ATGTCCATCATGAATTCCTTCATCAATGACATCTTCGAGAAGCTCGCGCAG-GAGGCCGC 18585623 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 | || || | | ||||||| ||| ||| | | ||||||||||||||| | || Sbjct 18585624 CAGGCTCGCCAGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCTGT 18585683 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 18585684 TCGTCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 18585736 >seq3 Length=46202548 Score = 158 bits (174), Expect = 2e-32 Identities = 178/233 (76%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||| || |||||||||||||| || | | || |||||||| | || Sbjct 12881868 ATCTTCAAGGTCCTGAAGCAGGTGCACCCG-GA--CATCGGAATCTCCTCCAA---GGCC 12881921 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCGG 725029 ||||||||||||||||| || |||||||||| |||| ||| ||| ||||||| Sbjct 12881922 ATGTCGATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCGCAG-GAGGCCGC 12881980 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 ||||| || |||| ||||||| ||| ||| | | ||||||||||||||| |||| Sbjct 12881981 CCGCCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCCGT 12882040 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 12882041 CCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 12882093 >seq8 Length=23026653 Score = 140 bits (154), Expect = 5e-27 Identities = 172/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||| ||||||||||||||||| || | | ||| |||||||| | || Sbjct 20320071 ATCTTCAAGGTCCTCAAGCAGGTGCACCCG-GA--CATCGGGATCTCCTCCAA---GGCC 20320124 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 |||||||||||||||||||| |||||||||| |||| ||| | |||||||| Sbjct 20320125 ATGTCGATCATGAACTCGTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCGCC 20320184 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || | | ||||||| ||| ||| | | | |||||||||||| |||| Sbjct 20320185 AAGCTCGCCAGGTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTC 20320244 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| |||||||||||| |||||||||| Sbjct 20320245 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCA 20320296 >seq9 Length=22605696 Score = 89.7 bits (98), Expect = 7e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 799188 GCCGCCGCGCAGCCTGAGCACCAGGTGCATCGTCGCATCGGCGCGGATGGCATAGTCGAC 799247 ||||||||| || | |||||||||||||| ||||| || ||||| |||||| | Sbjct 15402876 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 15402817 Query 799248 CAGGCGGCGACTGTCTTCCAACTGTTGGCCCGCATAAATGAGGCGCTGCTGGTCGGGTGG 799307 |||| ||| | || |||| ||| | ||||| | ||||||||||||||||| || || Sbjct 15402816 CAGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGCGG 15402757 Query 799308 TATTCCTGT 799316 || ||||| Sbjct 15402756 GATACCTGT 15402748 Score = 86.0 bits (94), Expect = 9e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 799188 GCCGCCGCGCAGCCTGAGCACCAGGTGCATCGTCGCATCGGCGCGGATGGCATAGTCGAC 799247 ||||||||| || | |||||||||||||| ||||| || ||||| |||||| | Sbjct 15391469 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 15391410 Query 799248 CAGGCGGCGACTGTCTTCCAACTGTTGGCCCGCATAAATGAGGCGCTGCTGGTCGGGTGG 799307 |||| ||| | || |||| ||| | ||||| | ||||||||||||||||| || || Sbjct 15391409 CAGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGG 15391350 Query 799308 TATTCCT 799314 || ||| Sbjct 15391349 GATACCT 15391343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176876774593456