Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
seq6 134 1e-26
seq2 123 2e-23
seq5 120 3e-22
seq4 116 3e-21
seq8 109 5e-19
seq10 86.0 6e-12
seq9 86.0 6e-12
seq7 86.0 6e-12
>seq1
Length=43445878
Score = 138 bits (152), Expect = 1e-27
Identities = 148/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||| | ||| ||| |||| ||||||||||| || || ||
Sbjct 9972218 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 9972159
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||||||| | || | | |||||||||| |||||| ||||| ||
Sbjct 9972158 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 9972100
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| || |||||||||| ||||||||| || ||||||| || ||||
Sbjct 9972099 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 9972040
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 9972039 CGAAGATCTGCAT 9972027
Score = 138 bits (152), Expect = 1e-27
Identities = 148/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||| | ||| ||| |||| ||||||||||| || || ||
Sbjct 9981426 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 9981367
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||||||| | || | | |||||||||| |||||| ||||| ||
Sbjct 9981366 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 9981308
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| || |||||||||| ||||||||| || ||||||| || ||||
Sbjct 9981307 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 9981248
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 9981247 CGAAGATCTGCAT 9981235
Score = 122 bits (134), Expect = 8e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||| || | ||| |||||| || |||||||| ||||||| || || |||| ||
Sbjct 21648093 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTC 21648152
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || || || || | |||||||||||||| || | | ||||||||||
Sbjct 21648153 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 21648212
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
| ||| ||| | | | ||||||||| |||||||||| |||||| || ||
Sbjct 21648213 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 21648272
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||||| || ||||| || ||||||||
Sbjct 21648273 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 21648302
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||||| || || |||| ||||||||||| || || ||
Sbjct 21638794 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 21638853
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| || || |||| |||| |||| |||| | ||| | |
Sbjct 21638854 GATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTT 21638913
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| |||| ||||| || ||| | | |||||| || | || ||| || |||||
Sbjct 21638914 CTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCAC 21638973
Query 35725 AAATATCTGC 35734
|||||| ||
Sbjct 21638974 GAATATCAGC 21638983
>seq6
Length=30401905
Score = 134 bits (148), Expect = 1e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| || |||||||||||||| |||| ||| || |||| || |||||||| || |||||
Sbjct 26902820 CTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCAAA 26902761
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||| | | |||||||||| |||||| ||||| | |
Sbjct 26902760 GATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 26902701
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| ||| || ||||| | ||||| || || || ||||| || |||||
Sbjct 26902700 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 26902641
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 26902640 AAAGATCTGCAT 26902629
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || || || |||||| |||||||||||||| |||
Sbjct 26903083 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 26903024
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || | || || |||||||| || ||||| || | ||||||||||||| |||
Sbjct 26903023 AGGGTGCGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 26902964
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | |||||||||| |||||| ||||| |||| | | ||| || || || ||
Sbjct 26902963 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTATCAGAAGACTCAAC 26902905
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | ||| || || || || |||| || || ||||| ||||||||
Sbjct 26902904 CTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857
Score = 109 bits (120), Expect = 5e-19
Identities = 150/208 (72%), Gaps = 5/208 (2%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||||| ||| || | || || |||||||| || || ||
Sbjct 27218326 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 27218267
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| || | || |||||||||| |||||| ||| | | |
Sbjct 27218266 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 27218207
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || || ||||| | ||||| || || || || | || |||||
Sbjct 27218206 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 27218147
Query 35725 AAATATCTGCATTCTGTGCGCACACACA 35752
||| ||||||| ||| |||||||||
Sbjct 27218146 AAAGATCTGCA-TCT----GCACACACA 27218124
Score = 86.0 bits (94), Expect = 6e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | | ||||| |||||||| | ||| ||| || |||||||||||||| |
Sbjct 25234387 TTCCACCCCTGAGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAG 25234328
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || || | || ||||| ||||| || || || |||| || |||||||| | |
Sbjct 25234327 CTAATGTACGTCCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGG 25234268
Query 35628 GAACGCTCTCCTTGTCC 35644
||| | ||| ||||||
Sbjct 25234267 GAATACCCTCTTTGTCC 25234251
Score = 86.0 bits (94), Expect = 6e-12
Identities = 138/197 (70%), Gaps = 1/197 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||| || | ||| || | || || || ||||| || |||||
Sbjct 26902592 CTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAA 26902533
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | || |||||||| | |||| || ||||||||| ||||| ||||| |
Sbjct 26902532 GATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTCACATC 26902473
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | || || || || ||||| | ||||| || || || || | || |||||
Sbjct 26902472 GTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 26902413
Query 35725 AAATATCTGCATTCTGT 35741
||| ||||||| |||||
Sbjct 26902412 AAAGATCTGCA-TCTGT 26902397
>seq2
Length=36083738
Score = 123 bits (136), Expect = 2e-23
Identities = 145/195 (74%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||||| ||| || | || ||||||||||| || || ||
Sbjct 2262237 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAA 2262296
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | |||| | |||||||||| |||||| ||||| | |
Sbjct 2262297 GATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 2262356
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| |||| || ||||||| ||||| || || || ||||| || ||
Sbjct 2262357 ATCAATGGTGTCGGAGCTC---TCAACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTT 2262413
Query 35722 CACAAATATCTGCAT 35736
||| || ||||||||
Sbjct 2262414 CACGAAGATCTGCAT 2262428
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || || | ||| | | || ||||||||||| || |||||
Sbjct 2263010 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2263069
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| |||| || |||||||||| |||||| ||| | | |
Sbjct 2263070 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 2263129
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || |||||||| | ||||| || || || ||||| || |||||
Sbjct 2263130 GTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 2263189
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 2263190 AAAGATCTGCAT 2263201
Score = 111 bits (122), Expect = 1e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||| | ||| | | || ||||||||||| || |||||
Sbjct 2262782 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2262841
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | |||| || |||||||||| |||||| ||| | ||
Sbjct 2262842 GATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2262900
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| || |||||||| | ||||| || || || |||| ||| || |
Sbjct 2262901 TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGA 2262960
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 2262961 CGAAGATCTGCAT 2262973
Score = 104 bits (114), Expect = 2e-17
Identities = 143/196 (73%), Gaps = 8/196 (4%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || || | ||| | | || ||||||||||| || |||||
Sbjct 2262465 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2262524
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| |||| || |||||||||| |||||| ||| | ||
Sbjct 2262525 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2262583
Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720
|| | | ||||| |||| || ||||||| ||||| || || || || | || |
Sbjct 2262584 TGTCGATGGTGTCCGAGCTC---TCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCT 2262640
Query 35721 TCACAAATATCTGCAT 35736
| ||||| ||||||||
Sbjct 2262641 TGACAAAGATCTGCAT 2262656
>seq5
Length=25164199
Score = 120 bits (132), Expect = 3e-22
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||| | ||| || |||| || |||||||| || || ||
Sbjct 3097298 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3097357
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| || | | ||||||||| |||||| ||||| ||
Sbjct 3097358 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3097416
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | ||||| || |||||||||| |||||| || || ||||||| || ||||
Sbjct 3097417 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3097476
Query 35724 CAAATATCTGCAT 35736
| || ||||||||
Sbjct 3097477 CGAAGATCTGCAT 3097489
Score = 120 bits (132), Expect = 3e-22
Identities = 145/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||| | ||||| |||| ||||||||||| || |||||
Sbjct 21087944 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAA 21088003
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | |||| || |||||||||| |||||| ||| | ||
Sbjct 21088004 AATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 21088062
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | |||||| || || ||||| | ||| || || || || || | || ||||
Sbjct 21088063 TGTCGATCGTGTCTGATGACTCGACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCA 21088122
Query 35724 CAAATATCTGCATTC 35738
| || ||||||||||
Sbjct 21088123 CGAAGATCTGCATTC 21088137
Score = 105 bits (116), Expect = 6e-18
Identities = 141/195 (72%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| ||||| | ||| || | || ||||||||||| || || ||
Sbjct 21087488 CTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAA 21087547
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | |||| | ||||| ||| |||||| ||||| | |
Sbjct 21087548 GATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATCTTAGCCTTCACATT 21087607
Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | ||||| |||| || ||||||| || || || || || || | ||| ||
Sbjct 21087608 GTCGATGGTGTCGGAGCTC---TCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTCTT 21087664
Query 35722 CACAAATATCTGCAT 35736
||||| ||||||||
Sbjct 21087665 GACAAAGATCTGCAT 21087679
Score = 102 bits (112), Expect = 7e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || || | ||| | | || || |||||||| || |||||
Sbjct 21088172 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 21088231
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||||| |||| | |||||||||| |||| ||||| | | ||
Sbjct 21088232 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATC-TTTGCCTTAACGT 21088290
Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | || || || || ||||| | ||||| || || || ||||| || || |
Sbjct 21088291 TGTCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 21088350
Query 35724 CAAATATCTGCAT 35736
|||| || |||||
Sbjct 21088351 CAAAGATTTGCAT 21088363
Score = 100 bits (110), Expect = 3e-16
Identities = 152/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
|||||| |||| ||| |||||| ||||||||||| || || | ||| || | || ||
Sbjct 21087698 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 21087757
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
||||||||| || ||||| || | | ||||||||| | || | || |||||| |||
Sbjct 21087758 CAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTG 21087817
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703
|||||| ||||| | | | ||||| |||| || ||||| | || || ||
Sbjct 21087818 GATCTTCGCCTTCACGTTATCAATGGTGTCCGAGCTC---TCAACCTCAAGGGTAATAGT 21087874
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| || || | || || ||||| ||||||||||
Sbjct 21087875 CTTGCCAGTGAGTGTCTTGACAAAAATCTGCATTC 21087909
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || || | || ||| | || || |||||||| || || ||
Sbjct 21088401 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 21088460
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | ||||||||||||| || | | |||||||||| |||||| ||| | | |
Sbjct 21088461 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 21088520
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || || || || ||||| | || || || || || || | ||| ||||||
Sbjct 21088521 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 21088580
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 21088581 AAGATCTGCAT 21088591
>seq4
Length=32292456
Score = 116 bits (128), Expect = 3e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || || || | ||| || |||| || |||||||| || || ||
Sbjct 28749952 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 28749893
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||||||| | ||| | || |||||| ||| |||||| ||||| | |
Sbjct 28749892 GATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 28749833
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || || ||||||| |||||||| || || || | || |||||
Sbjct 28749832 GTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCAC 28749773
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 28749772 AAAGATCTGCAT 28749761
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || || || | ||| || |||| || |||||||| || || ||
Sbjct 28750180 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 28750121
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||||||| | ||| | || |||||| ||| |||||| ||||| | |
Sbjct 28750120 GATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 28750061
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || || ||||||| ||||| || || || || | || |||||
Sbjct 28750060 GTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 28750001
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 28750000 GAAGATCTGCAT 28749989
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || || || | ||| || |||| || |||||||| || || ||
Sbjct 28750408 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 28750349
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | |||||||||||| | ||| | || |||||| ||| |||||| ||||| | |
Sbjct 28750348 GATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 28750289
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || || ||||||| ||||| || || || || | || |||||
Sbjct 28750288 GTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 28750229
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 28750228 GAAGATCTGCAT 28750217
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|||||||| |||||||| || || | ||| || | || || |||||||| || |||||
Sbjct 28749723 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 28749664
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|| | ||||||||||| | || | | |||||||||| |||||| ||||| | |
Sbjct 28749663 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 28749604
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | |||||| ||| || ||||||| || || || || || || | || |||||
Sbjct 28749603 TCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 28749544
Query 35726 AATATCTGCAT 35736
||||| |||||
Sbjct 28749543 AATATTTGCAT 28749533
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| ||||| || | || ||| | || || |||||||| || || ||
Sbjct 28749496 CTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAA 28749437
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||||| ||| | || |||||| ||| ||||| ||||| | |
Sbjct 28749436 GATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATT 28749377
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||| ||| || || ||||||| ||||| || || || || | || || ||
Sbjct 28749376 GTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAAC 28749317
Query 35725 AAATATCTGCAT 35736
|||||||||||
Sbjct 28749316 GAATATCTGCAT 28749305
Score = 82.4 bits (90), Expect = 7e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| || |||| ||| || |||| ||||||||||| || || ||
Sbjct 3242670 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAA 3242729
Query 35605 TATCAACCGCTGCTGGTCCG 35624
|||| ||||||||||||||
Sbjct 3242730 GATCAGCCGCTGCTGGTCCG 3242749
>seq8
Length=23026653
Score = 109 bits (120), Expect = 5e-19
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| || || | ||| || | || || |||||||| || || ||
Sbjct 4124585 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAA 4124644
Query 35605 TATCAACCG--CTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA 35662
|| | || ||||||||| | | || || |||||||||| ||||||| ||||| |
Sbjct 4124645 GATGAGGCGCTCTGCTGGTCTGGGGAAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACA 4124704
Query 35663 GTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722
| | | ||||| || |||||||| | ||||| | || || |||| ||| |||
Sbjct 4124705 TTGTCGATGGTGTCTGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTC 4124764
Query 35723 ACAAATATCTGCAT 35736
||||| ||||||||
Sbjct 4124765 ACAAAGATCTGCAT 4124778
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| || || | ||| || | || || |||||||| || || ||
Sbjct 4139849 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCGGCGAA 4139908
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | ||||||||||| | ||| | | |||||||||| |||||| ||||| | |
Sbjct 4139909 GATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 4139968
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || |||||||| | ||||| | || || |||| || |||||
Sbjct 4139969 GTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCAC 4140028
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 4140029 AAAGATCTGCAT 4140040
>seq10
Length=17164355
Score = 86.0 bits (94), Expect = 6e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||||| || ||| |||| ||||||||||| || || ||
Sbjct 12574684 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGCCCGTCCTCCAGCTGCTTCCCGGCGAA 12574743
Query 35605 TATCAACCGCTGCTGGTCCG 35624
|||| ||||||||||||||
Sbjct 12574744 GATCAGCCGCTGCTGGTCCG 12574763
>seq9
Length=22605696
Score = 86.0 bits (94), Expect = 6e-12
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| ||||||||||| ||||||| || ||| | || ||||||||||| || || ||
Sbjct 12264439 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 12264380
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|||||| ||||| || || | ||| | | |||||||||
Sbjct 12264379 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 12264340
>seq7
Length=26479886
Score = 86.0 bits (94), Expect = 6e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| ||||||| || ||| |||| ||||||||||| || || ||
Sbjct 22381796 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGCCCGTCCTCCAGCTGCTTCCCGGCGAA 22381737
Query 35605 TATCAACCGCTGCTGGTCCG 35624
|||| ||||||||||||||
Sbjct 22381736 GATCAGCCGCTGCTGGTCCG 22381717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450739008895040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |