Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21] 9,688 sequences; 362,063,720 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq6 134 1e-26 seq2 123 2e-23 seq5 120 3e-22 seq4 116 3e-21 seq8 109 5e-19 seq10 86.0 6e-12 seq9 86.0 6e-12 seq7 86.0 6e-12 >seq1 Length=43445878 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| ||| |||| ||||||||||| || || || Sbjct 9972218 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 9972159 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | || | | |||||||||| |||||| ||||| || Sbjct 9972158 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 9972100 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| ||||||||| || ||||||| || |||| Sbjct 9972099 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 9972040 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 9972039 CGAAGATCTGCAT 9972027 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| ||| |||| ||||||||||| || || || Sbjct 9981426 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 9981367 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | || | | |||||||||| |||||| ||||| || Sbjct 9981366 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 9981308 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| ||||||||| || ||||||| || |||| Sbjct 9981307 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 9981248 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 9981247 CGAAGATCTGCAT 9981235 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || |||||||| ||||||| || || |||| || Sbjct 21648093 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTC 21648152 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || || | |||||||||||||| || | | |||||||||| Sbjct 21648153 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 21648212 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| ||| | | | ||||||||| |||||||||| |||||| || || Sbjct 21648213 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 21648272 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || ||||| || |||||||| Sbjct 21648273 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 21648302 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || || |||| ||||||||||| || || || Sbjct 21638794 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 21638853 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| || || |||| |||| |||| |||| | ||| | | Sbjct 21638854 GATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTT 21638913 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | |||| ||||| || ||| | | |||||| || | || ||| || ||||| Sbjct 21638914 CTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCAC 21638973 Query 35725 AAATATCTGC 35734 |||||| || Sbjct 21638974 GAATATCAGC 21638983 >seq6 Length=30401905 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| |||| ||| || |||| || |||||||| || ||||| Sbjct 26902820 CTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCAAA 26902761 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||||||| |||||| ||||| | | Sbjct 26902760 GATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 26902701 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||| | ||||| || || || ||||| || ||||| Sbjct 26902700 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 26902641 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 26902640 AAAGATCTGCAT 26902629 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| |||||||||||||| ||| Sbjct 26903083 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCC 26903024 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || ||||| || | ||||||||||||| ||| Sbjct 26903023 AGGGTGCGTCCATCCTCGAGCTGCTTGCCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGA 26902964 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| |||||| ||||| |||| | | ||| || || || || Sbjct 26902963 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTATCAGAAGACTCAAC 26902905 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||| || || || || |||| || || ||||| |||||||| Sbjct 26902904 CTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 26902857 Score = 109 bits (120), Expect = 5e-19 Identities = 150/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || | || || |||||||| || || || Sbjct 27218326 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 27218267 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||| | | | Sbjct 27218266 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 27218207 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || || | || ||||| Sbjct 27218206 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 27218147 Query 35725 AAATATCTGCATTCTGTGCGCACACACA 35752 ||| ||||||| ||| ||||||||| Sbjct 27218146 AAAGATCTGCA-TCT----GCACACACA 27218124 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | | ||||| |||||||| | ||| ||| || |||||||||||||| | Sbjct 25234387 TTCCACCCCTGAGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAG 25234328 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || || | || ||||| ||||| || || || |||| || |||||||| | | Sbjct 25234327 CTAATGTACGTCCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGG 25234268 Query 35628 GAACGCTCTCCTTGTCC 35644 ||| | ||| |||||| Sbjct 25234267 GAATACCCTCTTTGTCC 25234251 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || || ||||| || ||||| Sbjct 26902592 CTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAA 26902533 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | |||| || ||||||||| ||||| ||||| | Sbjct 26902532 GATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTCACATC 26902473 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || || ||||| | ||||| || || || || | || ||||| Sbjct 26902472 GTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 26902413 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 26902412 AAAGATCTGCA-TCTGT 26902397 >seq2 Length=36083738 Score = 123 bits (136), Expect = 2e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || | || ||||||||||| || || || Sbjct 2262237 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAA 2262296 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| | |||||||||| |||||| ||||| | | Sbjct 2262297 GATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 2262356 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||||| ||||| || || || ||||| || || Sbjct 2262357 ATCAATGGTGTCGGAGCTC---TCAACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTT 2262413 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 2262414 CACGAAGATCTGCAT 2262428 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || ||||| Sbjct 2263010 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2263069 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||| | | | Sbjct 2263070 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 2263129 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||| | ||||| || || || ||||| || ||||| Sbjct 2263130 GTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 2263189 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 2263190 AAAGATCTGCAT 2263201 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| | | || ||||||||||| || ||||| Sbjct 2262782 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2262841 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||| | || Sbjct 2262842 GATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2262900 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||| | ||||| || || || |||| ||| || | Sbjct 2262901 TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGAGTCTTGA 2262960 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 2262961 CGAAGATCTGCAT 2262973 Score = 104 bits (114), Expect = 2e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || ||||| Sbjct 2262465 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 2262524 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||| | || Sbjct 2262525 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2262583 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | ||||| |||| || ||||||| ||||| || || || || | || | Sbjct 2262584 TGTCGATGGTGTCCGAGCTC---TCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCT 2262640 Query 35721 TCACAAATATCTGCAT 35736 | ||||| |||||||| Sbjct 2262641 TGACAAAGATCTGCAT 2262656 >seq5 Length=25164199 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| || |||||||| || || || Sbjct 3097298 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 3097357 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||||| || Sbjct 3097358 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3097416 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| |||||| || || ||||||| || |||| Sbjct 3097417 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3097476 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3097477 CGAAGATCTGCAT 3097489 Score = 120 bits (132), Expect = 3e-22 Identities = 145/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||||| |||| ||||||||||| || ||||| Sbjct 21087944 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCTGCCGTCCTCCAGCTGCTTGCCAGCAAA 21088003 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||| | || Sbjct 21088004 AATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 21088062 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||| || || || || || | || |||| Sbjct 21088063 TGTCGATCGTGTCTGATGACTCGACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCA 21088122 Query 35724 CAAATATCTGCATTC 35738 | || |||||||||| Sbjct 21088123 CGAAGATCTGCATTC 21088137 Score = 105 bits (116), Expect = 6e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||||| | ||| || | || ||||||||||| || || || Sbjct 21087488 CTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAA 21087547 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| | ||||| ||| |||||| ||||| | | Sbjct 21087548 GATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTATCCTGGATCTTAGCCTTCACATT 21087607 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||||| || || || || || || | ||| || Sbjct 21087608 GTCGATGGTGTCGGAGCTC---TCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTCTT 21087664 Query 35722 CACAAATATCTGCAT 35736 ||||| |||||||| Sbjct 21087665 GACAAAGATCTGCAT 21087679 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || || |||||||| || ||||| Sbjct 21088172 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 21088231 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||| ||||| | | || Sbjct 21088232 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATC-TTTGCCTTAACGT 21088290 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | ||||| || || || ||||| || || | Sbjct 21088291 TGTCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 21088350 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 21088351 CAAAGATTTGCAT 21088363 Score = 100 bits (110), Expect = 3e-16 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| |||| ||| |||||| ||||||||||| || || | ||| || | || || Sbjct 21087698 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 21087757 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || ||||| || | | ||||||||| | || | || |||||| ||| Sbjct 21087758 CAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTG 21087817 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 |||||| ||||| | | | ||||| |||| || ||||| | || || || Sbjct 21087818 GATCTTCGCCTTCACGTTATCAATGGTGTCCGAGCTC---TCAACCTCAAGGGTAATAGT 21087874 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || || || | || || ||||| |||||||||| Sbjct 21087875 CTTGCCAGTGAGTGTCTTGACAAAAATCTGCATTC 21087909 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || || | || ||| | || || |||||||| || || || Sbjct 21088401 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 21088460 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| || | | |||||||||| |||||| ||| | | | Sbjct 21088461 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 21088520 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || || || ||||| | || || || || || || | ||| |||||| Sbjct 21088521 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 21088580 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 21088581 AAGATCTGCAT 21088591 >seq4 Length=32292456 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || || | ||| || |||| || |||||||| || || || Sbjct 28749952 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 28749893 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | ||| | || |||||| ||| |||||| ||||| | | Sbjct 28749892 GATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 28749833 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| |||||||| || || || | || ||||| Sbjct 28749832 GTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCAC 28749773 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 28749772 AAAGATCTGCAT 28749761 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || || | ||| || |||| || |||||||| || || || Sbjct 28750180 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 28750121 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | ||| | || |||||| ||| |||||| ||||| | | Sbjct 28750120 GATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 28750061 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| ||||| || || || || | || ||||| Sbjct 28750060 GTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 28750001 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 28750000 GAAGATCTGCAT 28749989 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || || | ||| || |||| || |||||||| || || || Sbjct 28750408 CTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAA 28750349 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | ||| | || |||||| ||| |||||| ||||| | | Sbjct 28750348 GATGAGCCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATT 28750289 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| ||||| || || || || | || ||||| Sbjct 28750288 GTCGATTGTGTCGGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 28750229 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 28750228 GAAGATCTGCAT 28750217 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || || | ||| || | || || |||||||| || ||||| Sbjct 28749723 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 28749664 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | || | | |||||||||| |||||| ||||| | | Sbjct 28749663 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 28749604 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| ||| || ||||||| || || || || || || | || ||||| Sbjct 28749603 TCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 28749544 Query 35726 AATATCTGCAT 35736 ||||| ||||| Sbjct 28749543 AATATTTGCAT 28749533 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| ||||| || | || ||| | || || |||||||| || || || Sbjct 28749496 CTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAA 28749437 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| ||| | || |||||| ||| ||||| ||||| | | Sbjct 28749436 GATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTATCCTGAATCTTAGCCTTCACATT 28749377 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| ||| || || ||||||| ||||| || || || || | || || || Sbjct 28749376 GTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAAC 28749317 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 28749316 GAATATCTGCAT 28749305 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| || |||| ||||||||||| || || || Sbjct 3242670 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAA 3242729 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 3242730 GATCAGCCGCTGCTGGTCCG 3242749 >seq8 Length=23026653 Score = 109 bits (120), Expect = 5e-19 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || || | ||| || | || || |||||||| || || || Sbjct 4124585 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCGGCGAA 4124644 Query 35605 TATCAACCG--CTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA 35662 || | || ||||||||| | | || || |||||||||| ||||||| ||||| | Sbjct 4124645 GATGAGGCGCTCTGCTGGTCTGGGGAAATGCCCTCCTTGTCCTGGATCTTTGCCTTCACA 4124704 Query 35663 GTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722 | | | ||||| || |||||||| | ||||| | || || |||| ||| ||| Sbjct 4124705 TTGTCGATGGTGTCTGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTC 4124764 Query 35723 ACAAATATCTGCAT 35736 ||||| |||||||| Sbjct 4124765 ACAAAGATCTGCAT 4124778 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || || | ||| || | || || |||||||| || || || Sbjct 4139849 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCCTCGAGCTGCTTGCCGGCGAA 4139908 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||||||| |||||| ||||| | | Sbjct 4139909 GATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 4139968 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||| | ||||| | || || |||| || ||||| Sbjct 4139969 GTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTCTTCAC 4140028 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4140029 AAAGATCTGCAT 4140040 >seq10 Length=17164355 Score = 86.0 bits (94), Expect = 6e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || ||| |||| ||||||||||| || || || Sbjct 12574684 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGCCCGTCCTCCAGCTGCTTCCCGGCGAA 12574743 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 12574744 GATCAGCCGCTGCTGGTCCG 12574763 >seq9 Length=22605696 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||||||| || ||| | || ||||||||||| || || || Sbjct 12264439 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 12264380 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||| ||||| || || | ||| | | ||||||||| Sbjct 12264379 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 12264340 >seq7 Length=26479886 Score = 86.0 bits (94), Expect = 6e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || ||| |||| ||||||||||| || || || Sbjct 22381796 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGCCCGTCCTCCAGCTGCTTCCCGGCGAA 22381737 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 22381736 GATCAGCCGCTGCTGGTCCG 22381717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450739008895040