Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_026926.1
Length=192108
Score E
Sequences producing significant alignments: (Bits) Value
seq10 578 5e-160
seq8 578 5e-160
seq7 578 5e-160
seq5 134 2e-26
>seq10
Length=17164355
Score = 578 bits (640), Expect = 5e-160
Identities = 722/987 (73%), Gaps = 2/987 (0%)
Strand=Plus/Plus
Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159
|| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 181280 CTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACCG 181339
| |||||| | | || | | || ||||| ||||| |||||||| || |||
Sbjct 15960665 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 15960724
Query 181340 CTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGC 181399
| |||||||| || ||||| ||||||||| || ||||| || ||||| || | ||
Sbjct 15960725 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 15960784
Query 181400 TGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 181459
||| ||| | | || ||| | |||||||| ||||||||| | ||||| | || ||
Sbjct 15960785 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 15960844
Query 181460 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCC 181519
|||||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||||||
Sbjct 15960845 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 15960904
Query 181520 CTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGG 181579
|| |||||||| ||||| || |||||||| || ||||| || |||||||| ||||| ||
Sbjct 15960905 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 15960964
Query 181580 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGG 181639
||| ||||| || ||| | || | || || ||||||| || || || | ||
Sbjct 15960965 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 15961024
Query 181640 TTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGG 181699
||||| || || ||||| |||||||| || || || || ||||| || ||||| |||||
Sbjct 15961025 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 15961084
Query 181700 TCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 181759
|| || ||||||||||||||| || |||||||| ||||| | ||||||||| | ||
Sbjct 15961085 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 15961144
Query 181760 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 181819
|| ||||||||||| || || |||||||| || | || | || || ||||| || ||
Sbjct 15961145 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 15961204
Query 181820 CCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACAC 181879
|| || |||||||| |||||||| ||| | | || | ||||| || || | || ||
Sbjct 15961205 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 15961264
Query 181880 CTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 181939
||||| || | |||||||||| ||| || |||||||| |||||||| || || ||
Sbjct 15961265 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 15961324
Query 181940 GCACAACTTCCCGCTTGATCTTGCAGC 181966
||||||||||| || || || || ||
Sbjct 15961325 TCACAACTTCCCTCTAGACCTAGCTGC 15961351
>seq8
Length=23026653
Score = 578 bits (640), Expect = 5e-160
Identities = 722/987 (73%), Gaps = 2/987 (0%)
Strand=Plus/Plus
Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159
|| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 181280 CTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACCG 181339
| |||||| | | || | | || ||||| ||||| |||||||| || |||
Sbjct 17290755 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 17290814
Query 181340 CTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGC 181399
| |||||||| || ||||| ||||||||| || ||||| || ||||| || | ||
Sbjct 17290815 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 17290874
Query 181400 TGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 181459
||| ||| | | || ||| | |||||||| ||||||||| | ||||| | || ||
Sbjct 17290875 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 17290934
Query 181460 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCC 181519
|||||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||||||
Sbjct 17290935 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 17290994
Query 181520 CTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGG 181579
|| |||||||| ||||| || |||||||| || ||||| || |||||||| ||||| ||
Sbjct 17290995 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 17291054
Query 181580 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGG 181639
||| ||||| || ||| | || | || || ||||||| || || || | ||
Sbjct 17291055 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 17291114
Query 181640 TTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGG 181699
||||| || || ||||| |||||||| || || || || ||||| || ||||| |||||
Sbjct 17291115 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 17291174
Query 181700 TCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 181759
|| || ||||||||||||||| || |||||||| ||||| | ||||||||| | ||
Sbjct 17291175 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 17291234
Query 181760 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 181819
|| ||||||||||| || || |||||||| || | || | || || ||||| || ||
Sbjct 17291235 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 17291294
Query 181820 CCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACAC 181879
|| || |||||||| |||||||| ||| | | || | ||||| || || | || ||
Sbjct 17291295 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 17291354
Query 181880 CTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 181939
||||| || | |||||||||| ||| || |||||||| |||||||| || || ||
Sbjct 17291355 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 17291414
Query 181940 GCACAACTTCCCGCTTGATCTTGCAGC 181966
||||||||||| || || || || ||
Sbjct 17291415 TCACAACTTCCCTCTAGACCTAGCTGC 17291441
Score = 495 bits (548), Expect = 5e-135
Identities = 716/1005 (71%), Gaps = 4/1005 (0%)
Strand=Plus/Minus
Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430
||||||||||| | | |||| || ||||| ||||| || |||||||| || | |||
Sbjct 17282599 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 17282540
Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490
|||| ||||||| | || | || |||||| |||| |||||| ||||||| || ||
Sbjct 17282539 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 17282480
Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 182549
|||| ||||| || | || ||||||| | |||||| || ||||||| | |||||
Sbjct 17282479 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGCAGCA 17282421
Query 182550 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609
|| || || ||||| || | | | || ||| | | ||||| ||||| || || |
Sbjct 17282420 GTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 17282361
Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669
|| ||| |||| || ||||| ||| | || || || |||| ||| || ||||||||
Sbjct 17282360 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCAT 17282301
Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 182728
|| || || || || || ||||||||| | | ||||||||||||||||| ||| ||
Sbjct 17282300 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTG-TTCA 17282242
Query 182729 AATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTT 182788
| | | ||||| ||||| ||| | || ||||| || || ||||| || || || ||
Sbjct 17282241 ATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATT 17282182
Query 182789 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 182848
||| || ||||| |||| || ||| |||||| || |||||| ||||| || || ||
Sbjct 17282181 CCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 17282122
Query 182849 GATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCA 182908
||| || | ||| | | ||| | || || || || || ||||| | ||||| || ||
Sbjct 17282121 GATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 17282062
Query 182909 TATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCAC 182968
||||||||||||||| || || | || | || ||||| | ||||| ||||| | ||
Sbjct 17282061 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAAC 17282002
Query 182969 AGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTC 183028
|| || || || | | ||| || || || ||||| || || || || | |
Sbjct 17282001 CGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCC 17281942
Query 183029 CACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTT 183088
||||| | || || || ||||| ||||| || || ||||| |||||||| ||||||||
Sbjct 17281941 AACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 17281882
Query 183089 CGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCAT 183148
|| ||||| ||| |||||| |||||||| || ||||||||| | ||||| || ||||
Sbjct 17281881 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCAC 17281822
Query 183149 GGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGA 183208
||| | ||| | | ||||||| | | || || ||||| || || ||||| |||||
Sbjct 17281821 CGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGA 17281762
Query 183209 TTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAA 183268
|| || || || || | ||||| ||||||||||| || ||||| |||||||| ||
Sbjct 17281761 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 17281702
Query 183269 GAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGA 183328
|| || ||| | || || || | ||||| ||| ||||| || ||||| || |||||
Sbjct 17281701 AAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 17281642
Query 183329 AAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373
||| | || |||||||| || |||||||| | || ||||| ||
Sbjct 17281641 AAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597
Score = 123 bits (136), Expect = 3e-23
Identities = 118/151 (78%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 181638 GGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTT 181697
|||||||| || || ||||| |||||||| || || || | ||||| || ||||| |||
Sbjct 13113499 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTT 13113558
Query 181698 GGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTC 181757
|| || || ||||||||||||||| || |||||||| ||||| | ||||| ||| |
Sbjct 13113559 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTG 13113618
Query 181758 GCAGCATGGCCTGTAGTTGGAATCTGGTTCA 181788
|| || |||| |||||| || || |||||||
Sbjct 13113619 GCTGCTTGGCATGTAGTAGGGATTTGGTTCA 13113649
>seq7
Length=26479886
Score = 578 bits (640), Expect = 5e-160
Identities = 722/987 (73%), Gaps = 2/987 (0%)
Strand=Plus/Plus
Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159
|| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 181280 CTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACCG 181339
| |||||| | | || | | || ||||| ||||| |||||||| || |||
Sbjct 22562484 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 22562543
Query 181340 CTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGC 181399
| |||||||| || ||||| ||||||||| || ||||| || ||||| || | ||
Sbjct 22562544 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 22562603
Query 181400 TGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCAT 181459
||| ||| | | || ||| | |||||||| ||||||||| | ||||| | || ||
Sbjct 22562604 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 22562663
Query 181460 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATCC 181519
|||||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||||||
Sbjct 22562664 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 22562723
Query 181520 CTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGG 181579
|| |||||||| ||||| || |||||||| || ||||| || |||||||| ||||| ||
Sbjct 22562724 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 22562783
Query 181580 TTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGG 181639
||| ||||| || ||| | || | || || ||||||| || || || | ||
Sbjct 22562784 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 22562843
Query 181640 TTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTGG 181699
||||| || || ||||| |||||||| || || || || ||||| || ||||| |||||
Sbjct 22562844 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 22562903
Query 181700 TCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 181759
|| || ||||||||||||||| || |||||||| ||||| | ||||||||| | ||
Sbjct 22562904 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 22562963
Query 181760 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 181819
|| ||||||||||| || || |||||||| || | || | || || ||||| || ||
Sbjct 22562964 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 22563023
Query 181820 CCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACAC 181879
|| || |||||||| |||||||| ||| | | || | ||||| || || | || ||
Sbjct 22563024 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 22563083
Query 181880 CTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 181939
||||| || | |||||||||| ||| || |||||||| |||||||| || || ||
Sbjct 22563084 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 22563143
Query 181940 GCACAACTTCCCGCTTGATCTTGCAGC 181966
||||||||||| || || || || ||
Sbjct 22563144 TCACAACTTCCCTCTAGACCTAGCTGC 22563170
Score = 145 bits (160), Expect = 9e-30
Identities = 206/287 (72%), Gaps = 2/287 (1%)
Strand=Plus/Plus
Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159
|| || || || || | || |||| | || ||||||| | | || || |||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219
|| ||||||||||| || |||| |||| || || || | |||| || || ||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 181266
|||||||| ||||| ||||||||||| | || || || |||||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146
>seq5
Length=25164199
Score = 134 bits (148), Expect = 2e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 183030 ACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTC 183089
||||| | || || || ||||| || || || || ||||| |||||||| ||||||||
Sbjct 21599162 ACTCAAGCTGAAGAAACTTATTCAATAGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 21599221
Query 183090 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183149
|| ||||| ||| |||||| |||||||| || ||||||||| | ||||| || ||||
Sbjct 21599222 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 21599281
Query 183150 GGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 183209
||| ||| | | ||||||| | | || || ||||| || || ||||| |||||
Sbjct 21599282 GGTTAATGGATGAGTACTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 21599341
Query 183210 TTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGT 183258
|| || || | || | |||| ||||||||||| || |||||||
Sbjct 21599342 TTCGTTTCCCAGAAAATCCGTGCAGTGGAAGATCCTGAATTTGAGACGT 21599390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 614543169808640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |