Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq10 560 2e-154
seq8 560 2e-154
seq7 560 2e-154
seq5 123 4e-23
>seq10
Length=17164355
Score = 560 bits (620), Expect = 2e-154
Identities = 700/957 (73%), Gaps = 2/957 (0%)
Strand=Plus/Plus
Query 174489 ACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCC 174548
||| | || ||||||||| |||| |||||||||||| | ||||| ||||| || || ||
Sbjct 15960387 ACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 15960446
Query 174549 GCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAAT 174607
|||||| | ||| || |||||||| ||| | | ||| || ||||| || || || || ||
Sbjct 15960447 GCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTAT 15960505
Query 174608 CCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGT 174667
||||| || || ||||||| | | || |||||||| || ||||||||||| || |
Sbjct 15960506 TCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTAT 15960565
Query 174668 TCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGA 174727
||||| ||| || ||||| | ||||| |||||||| |||||||| || | | ||
Sbjct 15960566 TCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGA 15960625
Query 174728 CGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTAT 174787
|| ||| | ||||| || ||||||| | ||| |||| | |||||| | ||||| |
Sbjct 15960626 TGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 15960685
Query 174788 CTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGAT 174847
|||||||| |||||||||||||| || ||| | |||||| | ||||||||
Sbjct 15960686 AGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT 15960745
Query 174848 CTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTT 174907
||| ||||| || || || |||||||| ||| | || || ||| | | || ||| |
Sbjct 15960746 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATTTACCCTAT 15960805
Query 174908 CGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACAT 174967
|||||||| ||||| || | ||||| || || || ||||| || ||||||| ||
Sbjct 15960806 TGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 15960865
Query 174968 GTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGC 175027
| | || ||||| ||||| ||||||||| | ||||| || || |||||||| || || ||
Sbjct 15960866 GATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 15960925
Query 175028 AGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACT 175087
||||| ||||| ||||| | ||| || ||||||||||| | || |||||| |
Sbjct 15960926 TGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 15960985
Query 175088 TGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGA 175147
|| | || || ||||||| || || || | ||||||| || || ||||| ||
Sbjct 15960986 GATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGA 15961045
Query 175148 AGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGC 175207
|||||| ||||| || ||||| || ||||| || || || || || ||||||||||| ||
Sbjct 15961046 AGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 15961105
Query 175208 TTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTAT 175267
| || |||||||| || || | ||||||||||| || || ||||| || || || ||
Sbjct 15961106 TAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGAT 15961165
Query 175268 CTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAA 175327
|||||||| || | ||| || || ||||| ||||| || || || ||||| |||||
Sbjct 15961166 TTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAA 15961225
Query 175328 CCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAG 175387
||| ||||| | || | |||||| | || | || || ||||| ||| | | ||| |
Sbjct 15961226 CCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 15961285
Query 175388 AGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444
||| |||||| |||||||||||||| || | ||||| ||||||||||| |||||
Sbjct 15961286 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGA 15961342
>seq8
Length=23026653
Score = 560 bits (620), Expect = 2e-154
Identities = 700/957 (73%), Gaps = 2/957 (0%)
Strand=Plus/Plus
Query 174489 ACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCC 174548
||| | || ||||||||| |||| |||||||||||| | ||||| ||||| || || ||
Sbjct 17290477 ACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 17290536
Query 174549 GCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAAT 174607
|||||| | ||| || |||||||| ||| | | ||| || ||||| || || || || ||
Sbjct 17290537 GCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTAT 17290595
Query 174608 CCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGT 174667
||||| || || ||||||| | | || |||||||| || ||||||||||| || |
Sbjct 17290596 TCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTAT 17290655
Query 174668 TCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGA 174727
||||| ||| || ||||| | ||||| |||||||| |||||||| || | | ||
Sbjct 17290656 TCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGA 17290715
Query 174728 CGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTAT 174787
|| ||| | ||||| || ||||||| | ||| |||| | |||||| | ||||| |
Sbjct 17290716 TGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 17290775
Query 174788 CTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGAT 174847
|||||||| |||||||||||||| || ||| | |||||| | ||||||||
Sbjct 17290776 AGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT 17290835
Query 174848 CTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTT 174907
||| ||||| || || || |||||||| ||| | || || ||| | | || ||| |
Sbjct 17290836 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATTTACCCTAT 17290895
Query 174908 CGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACAT 174967
|||||||| ||||| || | ||||| || || || ||||| || ||||||| ||
Sbjct 17290896 TGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 17290955
Query 174968 GTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGC 175027
| | || ||||| ||||| ||||||||| | ||||| || || |||||||| || || ||
Sbjct 17290956 GATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 17291015
Query 175028 AGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACT 175087
||||| ||||| ||||| | ||| || ||||||||||| | || |||||| |
Sbjct 17291016 TGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 17291075
Query 175088 TGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGA 175147
|| | || || ||||||| || || || | ||||||| || || ||||| ||
Sbjct 17291076 GATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGA 17291135
Query 175148 AGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGC 175207
|||||| ||||| || ||||| || ||||| || || || || || ||||||||||| ||
Sbjct 17291136 AGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 17291195
Query 175208 TTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTAT 175267
| || |||||||| || || | ||||||||||| || || ||||| || || || ||
Sbjct 17291196 TAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGAT 17291255
Query 175268 CTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAA 175327
|||||||| || | ||| || || ||||| ||||| || || || ||||| |||||
Sbjct 17291256 TTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAA 17291315
Query 175328 CCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAG 175387
||| ||||| | || | |||||| | || | || || ||||| ||| | | ||| |
Sbjct 17291316 CCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 17291375
Query 175388 AGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444
||| |||||| |||||||||||||| || | ||||| ||||||||||| |||||
Sbjct 17291376 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGA 17291432
Score = 439 bits (486), Expect = 4e-118
Identities = 702/1008 (70%), Gaps = 0/1008 (0%)
Strand=Plus/Minus
Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912
||||||| |||| |||||| | | || || | ||| | ||| | || |||||||| |
Sbjct 17282607 TGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCT 17282548
Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972
| | ||| |||| ||||||| | || | || || ||| |||| || |||||||||||
Sbjct 17282547 ATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGT 17282488
Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032
|| |||||| |||||||| | || ||||||| | || ||| || || | ||
Sbjct 17282487 AACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTAAC 17282428
Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092
|| || || || || ||||| || | | | || ||| | | ||||| ||||| ||
Sbjct 17282427 CGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCC 17282368
Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152
||| | || || || || || ||| ||| | || || || ||| | ||||||||
Sbjct 17282367 GGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGC 17282308
Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212
|||||| || || || || || || || |||||| | ||||| |||||||| || |
Sbjct 17282307 TCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTC 17282248
Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272
|| | || || || || || ||| ||||| ||| || |||||||| |||||
Sbjct 17282247 TGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTC 17282188
Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332
|| || || | || ||||| || ||||| ||||||||||| || ||||| ||
Sbjct 17282187 CGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGT 17282128
Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392
||||| || ||| ||||| | | || | || || || || || ||||| |||||||
Sbjct 17282127 AGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCC 17282068
Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452
|| ||||||||||||||||| || || |||| | || || |||| || || |||||
Sbjct 17282067 ATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGG 17282008
Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512
| || || ||||| || |||| ||| || || || || |||||| || ||
Sbjct 17282007 GGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTT 17281948
Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572
| | || || | ||||| || ||||| ||||| || || || ||||| ||||| ||
Sbjct 17281947 TAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCA 17281888
Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632
|||||| || ||||| ||| ||||| |||||| | || ||||||||| | ||||| ||
Sbjct 17281887 AATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACC 17281828
Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692
|||| ||| | ||| | ||||||| | | || || ||||| || || |||||
Sbjct 17281827 GGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGC 17281768
Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752
||||| || || ||| || || | ||||| ||||||||||| ||||| ||||||||
Sbjct 17281767 CTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTA 17281708
Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812
||| || || || ||| | ||||| || | | || ||||||||| || |||||| ||
Sbjct 17281707 CACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCC 17281648
Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860
||||| || ||||||| || || |||||||| | || |||||
Sbjct 17281647 TCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 17281600
Score = 111 bits (122), Expect = 2e-19
Identities = 115/151 (76%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 175125 GGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTC 175184
|||||||| || || ||||| |||||||| ||||| || |||| || ||||| || ||
Sbjct 13113499 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTT 13113558
Query 175185 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTA 175244
|| || || ||||||||||| ||| || |||||||| || || | ||||| |||||
Sbjct 13113559 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTG 13113618
Query 175245 GCCGCATGGCCAGTTGTGGGTATCTGGTTCA 175275
|| || |||| || || || || |||||||
Sbjct 13113619 GCTGCTTGGCATGTAGTAGGGATTTGGTTCA 13113649
>seq7
Length=26479886
Score = 560 bits (620), Expect = 2e-154
Identities = 700/957 (73%), Gaps = 2/957 (0%)
Strand=Plus/Plus
Query 174489 ACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCC 174548
||| | || ||||||||| |||| |||||||||||| | ||||| ||||| || || ||
Sbjct 22562206 ACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 22562265
Query 174549 GCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAAT 174607
|||||| | ||| || |||||||| ||| | | ||| || ||||| || || || || ||
Sbjct 22562266 GCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTAT 22562324
Query 174608 CCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGT 174667
||||| || || ||||||| | | || |||||||| || ||||||||||| || |
Sbjct 22562325 TCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTAT 22562384
Query 174668 TCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGA 174727
||||| ||| || ||||| | ||||| |||||||| |||||||| || | | ||
Sbjct 22562385 TCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGA 22562444
Query 174728 CGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTAT 174787
|| ||| | ||||| || ||||||| | ||| |||| | |||||| | ||||| |
Sbjct 22562445 TGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 22562504
Query 174788 CTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGAT 174847
|||||||| |||||||||||||| || ||| | |||||| | ||||||||
Sbjct 22562505 AGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT 22562564
Query 174848 CTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTT 174907
||| ||||| || || || |||||||| ||| | || || ||| | | || ||| |
Sbjct 22562565 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGCTGTTTTCTTGATTTACCCTAT 22562624
Query 174908 CGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACAT 174967
|||||||| ||||| || | ||||| || || || ||||| || ||||||| ||
Sbjct 22562625 TGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTAT 22562684
Query 174968 GTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGC 175027
| | || ||||| ||||| ||||||||| | ||||| || || |||||||| || || ||
Sbjct 22562685 GATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGC 22562744
Query 175028 AGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACT 175087
||||| ||||| ||||| | ||| || ||||||||||| | || |||||| |
Sbjct 22562745 TGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTT 22562804
Query 175088 TGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGA 175147
|| | || || ||||||| || || || | ||||||| || || ||||| ||
Sbjct 22562805 GATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGA 22562864
Query 175148 AGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGC 175207
|||||| ||||| || ||||| || ||||| || || || || || ||||||||||| ||
Sbjct 22562865 AGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGC 22562924
Query 175208 TTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTAT 175267
| || |||||||| || || | ||||||||||| || || ||||| || || || ||
Sbjct 22562925 TAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGAT 22562984
Query 175268 CTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAA 175327
|||||||| || | ||| || || ||||| ||||| || || || ||||| |||||
Sbjct 22562985 TTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAA 22563044
Query 175328 CCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAG 175387
||| ||||| | || | |||||| | || | || || ||||| ||| | | ||| |
Sbjct 22563045 CCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCG 22563104
Query 175388 AGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444
||| |||||| |||||||||||||| || | ||||| ||||||||||| |||||
Sbjct 22563105 TGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGA 22563161
Score = 163 bits (180), Expect = 4e-35
Identities = 211/289 (73%), Gaps = 2/289 (1%)
Strand=Plus/Plus
Query 174489 ACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCC 174548
||| | || ||||||||| |||| |||||||||||| | ||||| ||||| || || ||
Sbjct 22561882 ACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 22561941
Query 174549 GCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAAT 174607
|||||| | ||| || |||||||| ||| | | ||| || ||||| || || || | ||
Sbjct 22561942 GCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGATAT 22562000
Query 174608 CCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGT 174667
|||| | || ||||||| | | || |||||||| || ||||||||||| || |
Sbjct 22562001 TCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTAT 22562060
Query 174668 TCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGA 174727
||||| ||| || ||||| | |||| |||||||| |||||||| || | | ||
Sbjct 22562061 TCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAATTTGGGAAGCTGCATCTGTTGA 22562120
Query 174728 CGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTC 174776
|| ||| | ||||| || ||||||| | ||| |||| | ||||||
Sbjct 22562121 TGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 22562169
>seq5
Length=25164199
Score = 123 bits (136), Expect = 4e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 176529 GAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCAAATCTTCGGGGTTGCG 176588
||||| || ||||| || || || || || ||||| ||||| |||||||| || |||||
Sbjct 21599171 GAAGAAACTTATTCAATAGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCT 21599230
Query 176589 TTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCCTGTCATGGGTCTTTGG 176648
||| ||||| |||||| | || ||||||||| | ||||| || |||| ||| |||
Sbjct 21599231 TTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACCGGTTAATGG 21599290
Query 176649 GTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGC 176708
| | ||||||| | | || || ||||| || || ||||| ||||| || || |
Sbjct 21599291 ATGAGTACTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCC 21599350
Query 176709 CAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAAC 176746
|| | || | |||| ||||||||||| ||||| ||
Sbjct 21599351 CAGAAAATCCGTGCAGTGGAAGATCCTGAATTTGAGAC 21599388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729841205525440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |