Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq10 560 1e-154
seq8 560 1e-154
seq7 560 1e-154
seq5 138 1e-27
>seq10
Length=17164355
Score = 560 bits (620), Expect = 1e-154
Identities = 718/987 (73%), Gaps = 2/987 (0%)
Strand=Plus/Plus
Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027
|| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 178207
| |||||| | ||||| | | || ||||| |||||||||||||| | |||
Sbjct 15960665 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 15960724
Query 178208 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGC 178267
| | |||||||| || ||||| ||| ||||| || ||||| || ||||| || | ||
Sbjct 15960725 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 15960784
Query 178268 AGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCAT 178327
|| ||| || | || ||| | |||||||| || ||||| | ||||| | || ||
Sbjct 15960785 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 15960844
Query 178328 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCC 178387
|||||||| ||||||| ||| |||| ||||| ||||| || ||||| || ||||| ||
Sbjct 15960845 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 15960904
Query 178388 CTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGG 178447
|| |||||||| ||||| || ||||||||||| ||||| || |||||||| ||||| ||
Sbjct 15960905 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 15960964
Query 178448 TTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGG 178507
||| ||||| || ||| | | | ||||| ||||||| ||||| || | ||
Sbjct 15960965 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 15961024
Query 178508 TTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 178567
||| | || || ||||| |||||||| || || || || || || ||||| || || ||
Sbjct 15961025 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 15961084
Query 178568 TCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 178627
|| || ||||||||||||||| || |||||||| ||||| | ||||||||| | ||
Sbjct 15961085 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 15961144
Query 178628 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 178687
|| ||||||||||| || || |||||||| || | || | || || ||||| || ||
Sbjct 15961145 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 15961204
Query 178688 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178747
|| || |||||||| |||||||| || | | || | ||||| || || | || ||
Sbjct 15961205 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 15961264
Query 178748 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 178807
||||| || | |||||||||| ||| || |||||||| |||||||| || || ||
Sbjct 15961265 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 15961324
Query 178808 GCACAACTTCCCGCTTGATCTTGCAGC 178834
||||||||||| || || || || ||
Sbjct 15961325 TCACAACTTCCCTCTAGACCTAGCTGC 15961351
>seq8
Length=23026653
Score = 560 bits (620), Expect = 1e-154
Identities = 718/987 (73%), Gaps = 2/987 (0%)
Strand=Plus/Plus
Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027
|| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 178207
| |||||| | ||||| | | || ||||| |||||||||||||| | |||
Sbjct 17290755 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 17290814
Query 178208 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGC 178267
| | |||||||| || ||||| ||| ||||| || ||||| || ||||| || | ||
Sbjct 17290815 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 17290874
Query 178268 AGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCAT 178327
|| ||| || | || ||| | |||||||| || ||||| | ||||| | || ||
Sbjct 17290875 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 17290934
Query 178328 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCC 178387
|||||||| ||||||| ||| |||| ||||| ||||| || ||||| || ||||| ||
Sbjct 17290935 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 17290994
Query 178388 CTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGG 178447
|| |||||||| ||||| || ||||||||||| ||||| || |||||||| ||||| ||
Sbjct 17290995 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 17291054
Query 178448 TTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGG 178507
||| ||||| || ||| | | | ||||| ||||||| ||||| || | ||
Sbjct 17291055 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 17291114
Query 178508 TTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 178567
||| | || || ||||| |||||||| || || || || || || ||||| || || ||
Sbjct 17291115 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 17291174
Query 178568 TCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 178627
|| || ||||||||||||||| || |||||||| ||||| | ||||||||| | ||
Sbjct 17291175 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 17291234
Query 178628 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 178687
|| ||||||||||| || || |||||||| || | || | || || ||||| || ||
Sbjct 17291235 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 17291294
Query 178688 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178747
|| || |||||||| |||||||| || | | || | ||||| || || | || ||
Sbjct 17291295 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 17291354
Query 178748 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 178807
||||| || | |||||||||| ||| || |||||||| |||||||| || || ||
Sbjct 17291355 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 17291414
Query 178808 GCACAACTTCCCGCTTGATCTTGCAGC 178834
||||||||||| || || || || ||
Sbjct 17291415 TCACAACTTCCCTCTAGACCTAGCTGC 17291441
Score = 504 bits (558), Expect = 9e-138
Identities = 716/1002 (71%), Gaps = 4/1002 (0%)
Strand=Plus/Minus
Query 179233 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179292
||||||||||| | | |||| || ||||| ||||| || |||||||| || | |||
Sbjct 17282599 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 17282540
Query 179293 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179352
|||| ||||||| | || | || |||||| |||| |||||| ||||||| || ||
Sbjct 17282539 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 17282480
Query 179353 GGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTTA-CGGCAGCT 179411
|||| ||||| || | || ||||||||| | || ||| || ||||||| | |||||
Sbjct 17282479 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGCAGCA 17282421
Query 179412 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179471
|| || || ||||| || | | | || ||| | | ||||| ||||| || || |
Sbjct 17282420 GTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 17282361
Query 179472 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 179531
|| ||| |||| || ||||| ||| | || || || |||| ||| || ||||||||
Sbjct 17282360 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCAT 17282301
Query 179532 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 179590
|| || || || || || ||||||||| | | ||||||||||||||||| ||| |
Sbjct 17282300 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAA 17282241
Query 179591 TATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTT 179650
| | | ||||| ||||| ||| | || ||||| || || ||||| || || || ||
Sbjct 17282240 TTGCGG-CCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATT 17282182
Query 179651 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 179710
||| || ||||| |||| || ||| |||||| || |||||| ||||| || || ||
Sbjct 17282181 CCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 17282122
Query 179711 GATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCA 179770
||| || | ||| | || ||| | || || || || || |||||| | ||||| || ||
Sbjct 17282121 GATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 17282062
Query 179771 TATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTAC 179830
||||||||||||||| || || |||| | || ||||| | ||||| ||||| | ||
Sbjct 17282061 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAAC 17282002
Query 179831 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTC 179890
|| || || || | | ||| || || || ||||||||||| || ||| | |
Sbjct 17282001 CGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCC 17281942
Query 179891 GACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 179950
|| || | ||||| |||||||| |||||||| || || ||||| ||||| || |||||
Sbjct 17281941 AACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 17281882
Query 179951 CGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 180010
||| |||| ||||| || || || ||| | ||||| || ||| | ||||| || || |
Sbjct 17281881 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCAC 17281822
Query 180011 GGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGA 180070
||| |||||| |||||||| | | || || ||||| ||||| ||||| || ||
Sbjct 17281821 CGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGA 17281762
Query 180071 TTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAA 180130
||||| ||||| ||| | ||||| |||||||| || |||||||| |||||||||||
Sbjct 17281761 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 17281702
Query 180131 GAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGA 180190
|| |||||| | || || || | ||||| ||| ||||| | ||||| || |||||
Sbjct 17281701 AAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 17281642
Query 180191 GTCATTCGTATTCCCAGAAGAAGTTCTGCCAAGAGGTAATGC 180232
| ||||||| || || ||||| ||| | || || ||
Sbjct 17281641 AAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 17281600
Score = 120 bits (132), Expect = 4e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 178476 GAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACA 178535
||||| ||||||| ||||| || | ||||| || || || ||||| ||||||||
Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528
Query 178536 TACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTC 178595
|| || || | || || ||||| || || || || || ||||||||||||||| ||
Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588
Query 178596 AACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTC 178655
|||||||| ||||| | ||||| ||| | || || |||| |||||| || || ||||||
Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGTTC 13113648
Query 178656 A 178656
|
Sbjct 13113649 A 13113649
>seq7
Length=26479886
Score = 560 bits (620), Expect = 1e-154
Identities = 718/987 (73%), Gaps = 2/987 (0%)
Strand=Plus/Plus
Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027
|| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087
|| ||||||||||| || |||| |||| || || || | ||||| || || ||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147
|||||||| ||||| ||||||||||| | || || || ||||||| | || | ||
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 178207
| |||||| | ||||| | | || ||||| |||||||||||||| | |||
Sbjct 22562484 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 22562543
Query 178208 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGC 178267
| | |||||||| || ||||| ||| ||||| || ||||| || ||||| || | ||
Sbjct 22562544 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 22562603
Query 178268 AGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCAT 178327
|| ||| || | || ||| | |||||||| || ||||| | ||||| | || ||
Sbjct 22562604 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 22562663
Query 178328 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCC 178387
|||||||| ||||||| ||| |||| ||||| ||||| || ||||| || ||||| ||
Sbjct 22562664 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 22562723
Query 178388 CTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGG 178447
|| |||||||| ||||| || ||||||||||| ||||| || |||||||| ||||| ||
Sbjct 22562724 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 22562783
Query 178448 TTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGG 178507
||| ||||| || ||| | | | ||||| ||||||| ||||| || | ||
Sbjct 22562784 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGG 22562843
Query 178508 TTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 178567
||| | || || ||||| |||||||| || || || || || || ||||| || || ||
Sbjct 22562844 TTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGG 22562903
Query 178568 TCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 178627
|| || ||||||||||||||| || |||||||| ||||| | ||||||||| | ||
Sbjct 22562904 CCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGC 22562963
Query 178628 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 178687
|| ||||||||||| || || |||||||| || | || | || || ||||| || ||
Sbjct 22562964 TGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 22563023
Query 178688 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178747
|| || |||||||| |||||||| || | | || | ||||| || || | || ||
Sbjct 22563024 TCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATAC 22563083
Query 178748 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 178807
||||| || | |||||||||| ||| || |||||||| |||||||| || || ||
Sbjct 22563084 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 22563143
Query 178808 GCACAACTTCCCGCTTGATCTTGCAGC 178834
||||||||||| || || || || ||
Sbjct 22563144 TCACAACTTCCCTCTAGACCTAGCTGC 22563170
Score = 145 bits (160), Expect = 9e-30
Identities = 206/287 (72%), Gaps = 2/287 (1%)
Strand=Plus/Plus
Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908
|||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967
||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027
|| || || || || | || |||| | || ||||||| | | || || |||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087
|| ||||||||||| || |||| |||| || || || | |||| || || ||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 178134
|||||||| ||||| ||||||||||| | || || || |||||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146
>seq5
Length=25164199
Score = 138 bits (152), Expect = 1e-27
Identities = 183/254 (72%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 179865 GCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACT 179924
||||||||||| || ||| | | || || | ||||| |||||||| || |||||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 179925 GCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCAT 179984
|| || ||||| ||||| || ||||| ||| |||| ||||| || || || ||| | |||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 179985 TTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGT 180044
|| || ||| | ||||| || || | ||| ||||| |||||||| | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 180045 CTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGAT 180104
|| ||||| ||||| ||||| || || ||||| ||| | ||| | |||| ||||||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 180105 CCCGAGTTTGAGAC 180118
|| || ||||||||
Sbjct 21599375 CCTGAATTTGAGAC 21599388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605936212237440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |