Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq10 574 6e-159
seq8 574 6e-159
seq7 574 6e-159
seq5 138 1e-27
seq11 89.7 6e-13
seq3 87.8 2e-12
>seq10
Length=17164355
Score = 574 bits (636), Expect = 6e-159
Identities = 724/989 (73%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920
|||||| | ||| |||| |||| | || ||| | || | || ||||||||||| ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979
||||| ||||| || | | |||||| ||||| || || | || ||| | || || ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039
||| || |||||||| || || ||||| || || ||||||| | | || ||||||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099
|| ||||||||||| || | || | ||| || || || | ||||| ||||| ||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159
|||||||| ||||| | ||||||||| | || || || ||||||| | || | ||
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219
| |||||| | | || | | |||||||| |||||||||||||| || |||
Sbjct 15960665 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 15960724
Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279
||| ||||||||||| ||||| ||||||||| || || || || || ||||| | ||
Sbjct 15960725 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 15960784
Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339
|| ||| | | || ||| | |||||||| ||||||||||| ||||||| | || ||
Sbjct 15960785 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 15960844
Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399
||||||||||| |||| ||| |||||||||| ||||| || |||||||||||||| ||
Sbjct 15960845 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 15960904
Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459
|| || ||| | ||||| ||||| |||||||| || || || ||| ||||||||| ||
Sbjct 15960905 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 15960964
Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518
| || || || | | ||| || | ||||| ||||| | || || || | |
Sbjct 15960965 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 15961023
Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578
|||| | || || ||||| |||||||| ||||| || || || || ||||| || || |
Sbjct 15961024 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 15961083
Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638
| || || |||||||||||||| ||||||||||| || ||||| ||||||||| | |
Sbjct 15961084 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 15961143
Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCA 179698
|||| ||||| || || || || |||||||||||| | || | || ||||| ||||
Sbjct 15961144 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 15961203
Query 179699 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACA 179758
| || ||||| ||||| |||||||| || | |||| | ||||| || || |||| |
Sbjct 15961204 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 15961263
Query 179759 CATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACG 179818
| ||||| || | | |||||||| | | ||||||||||| ||||| || ||||| |
Sbjct 15961264 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 15961323
Query 179819 CACACAACTTCCCACTCGACCTTGCTGCT 179847
| ||||||||||| || ||||| ||||||
Sbjct 15961324 CTCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 574 bits (636), Expect = 6e-159
Identities = 724/989 (73%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920
|||||| | ||| |||| |||| | || ||| | || | || ||||||||||| ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979
||||| ||||| || | | |||||| ||||| || || | || ||| | || || ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039
||| || |||||||| || || ||||| || || ||||||| | | || ||||||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099
|| ||||||||||| || | || | ||| || || || | ||||| ||||| ||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159
|||||||| ||||| | ||||||||| | || || || ||||||| | || | ||
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219
| |||||| | | || | | |||||||| |||||||||||||| || |||
Sbjct 17290755 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 17290814
Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279
||| ||||||||||| ||||| ||||||||| || || || || || ||||| | ||
Sbjct 17290815 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 17290874
Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339
|| ||| | | || ||| | |||||||| ||||||||||| ||||||| | || ||
Sbjct 17290875 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 17290934
Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399
||||||||||| |||| ||| |||||||||| ||||| || |||||||||||||| ||
Sbjct 17290935 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 17290994
Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459
|| || ||| | ||||| ||||| |||||||| || || || ||| ||||||||| ||
Sbjct 17290995 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 17291054
Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518
| || || || | | ||| || | ||||| ||||| | || || || | |
Sbjct 17291055 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 17291113
Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578
|||| | || || ||||| |||||||| ||||| || || || || ||||| || || |
Sbjct 17291114 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 17291173
Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638
| || || |||||||||||||| ||||||||||| || ||||| ||||||||| | |
Sbjct 17291174 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 17291233
Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCA 179698
|||| ||||| || || || || |||||||||||| | || | || ||||| ||||
Sbjct 17291234 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 17291293
Query 179699 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACA 179758
| || ||||| ||||| |||||||| || | |||| | ||||| || || |||| |
Sbjct 17291294 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 17291353
Query 179759 CATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACG 179818
| ||||| || | | |||||||| | | ||||||||||| ||||| || ||||| |
Sbjct 17291354 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 17291413
Query 179819 CACACAACTTCCCACTCGACCTTGCTGCT 179847
| ||||||||||| || ||||| ||||||
Sbjct 17291414 CTCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 567 bits (628), Expect = 9e-157
Identities = 728/1001 (73%), Gaps = 2/1001 (0%)
Strand=Plus/Minus
Query 180031 TGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTC 180090
||||||||||| | | | ||||| ||||| ||||| || |||||||| ||| | |||
Sbjct 17282599 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 17282540
Query 180091 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTT 180150
|||| ||||||| | || | || |||||| |||| || ||| ||||||| || ||
Sbjct 17282539 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 17282480
Query 180151 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 180209
|||| ||||| || | || ||||||| | |||||| || ||||||| | |||||
Sbjct 17282479 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGCAGCA 17282421
Query 180210 GTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 180269
|| || || ||||| | | | | || ||| | | ||||| ||||| || || |
Sbjct 17282420 GTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 17282361
Query 180270 CAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 180329
|| ||| |||| || ||||| ||| | || || || |||| ||| || ||||||||
Sbjct 17282360 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCAT 17282301
Query 180330 GGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGT 180389
|| || || || ||||| || || ||| |||| || |||||||| || || | ||
Sbjct 17282300 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAA 17282241
Query 180390 ATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTT 180449
| || ||||| ||||| ||| |||||||||| || |||||||| ||||| ||||||
Sbjct 17282240 TTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTC 17282181
Query 180450 CTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCA 180509
|| || || |||||||| || ||| ||||||||||||| || |||||| ||||||||
Sbjct 17282180 CTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 17282121
Query 180510 ATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCAT 180569
|| ||| ||||| | ||||| | || || || || || ||||| | ||||| || |||
Sbjct 17282120 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 17282061
Query 180570 ATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACT 180629
|||||||||||||| || || |||| | || |||||| || || ||||| | |||
Sbjct 17282060 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 17282001
Query 180630 GTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCA 180689
||||| ||||| || | ||| || || || ||||| ||||| || ||| | ||
Sbjct 17282000 GTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 17281941
Query 180690 ACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTC 180749
|| |||| || |||||||| || |||||||| || || ||||| ||||| || |||||
Sbjct 17281940 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 17281881
Query 180750 GGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATG 180809
||| |||| ||||| || || || ||| | ||||| || ||| | ||||| || || |
Sbjct 17281880 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 17281821
Query 180810 GGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGAT 180869
||| |||||| |||||||| | | || || ||||| ||||| ||||| || ||
Sbjct 17281820 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 17281761
Query 180870 TTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAG 180929
||||| || || ||| | ||||| ||||||||||| || ||||| |||||||||||
Sbjct 17281760 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 17281701
Query 180930 AACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAA 180989
|| || || || || || || | ||||| ||| ||||| || ||||| || || |||
Sbjct 17281700 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 17281641
Query 180990 AACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030
|| | || |||||||| || ||||||||| | || |||||
Sbjct 17281640 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 17281600
Score = 114 bits (126), Expect = 2e-20
Identities = 116/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 179518 GGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTC 179577
||||| || || || ||||| |||||||| ||||| || | || || ||||| || ||
Sbjct 13113499 GGTTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTATGGCCGCTCATGGTTATTTT 13113558
Query 179578 GGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTT 179637
|| || || |||||||||||||| ||||||||||| || ||||| ||||| ||| |
Sbjct 13113559 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTTTTCTTG 13113618
Query 179638 GCTGCGTGGCCGGTTGTCGGCATCTGGTTCA 179668
||||| |||| || || || || |||||||
Sbjct 13113619 GCTGCTTGGCATGTAGTAGGGATTTGGTTCA 13113649
>seq7
Length=26479886
Score = 574 bits (636), Expect = 6e-159
Identities = 724/989 (73%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920
|||||| | ||| |||| |||| | || ||| | || | || ||||||||||| ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979
||||| ||||| || | | |||||| ||||| || || | || ||| | || || ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039
||| || |||||||| || || ||||| || || ||||||| | | || ||||||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099
|| ||||||||||| || | || | ||| || || || | ||||| ||||| ||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159
|||||||| ||||| | ||||||||| | || || || ||||||| | || | ||
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219
| |||||| | | || | | |||||||| |||||||||||||| || |||
Sbjct 22562484 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 22562543
Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279
||| ||||||||||| ||||| ||||||||| || || || || || ||||| | ||
Sbjct 22562544 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 22562603
Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339
|| ||| | | || ||| | |||||||| ||||||||||| ||||||| | || ||
Sbjct 22562604 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 22562663
Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399
||||||||||| |||| ||| |||||||||| ||||| || |||||||||||||| ||
Sbjct 22562664 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 22562723
Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459
|| || ||| | ||||| ||||| |||||||| || || || ||| ||||||||| ||
Sbjct 22562724 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 22562783
Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAGTCACAGAACTATG 179518
| || || || | | ||| || | ||||| ||||| | || || || | |
Sbjct 22562784 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 22562842
Query 179519 GTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCG 179578
|||| | || || ||||| |||||||| ||||| || || || || ||||| || || |
Sbjct 22562843 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 22562902
Query 179579 GTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTG 179638
| || || |||||||||||||| ||||||||||| || ||||| ||||||||| | |
Sbjct 22562903 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 22562962
Query 179639 CTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCA 179698
|||| ||||| || || || || |||||||||||| | || | || ||||| ||||
Sbjct 22562963 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 22563022
Query 179699 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACA 179758
| || ||||| ||||| |||||||| || | |||| | ||||| || || |||| |
Sbjct 22563023 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 22563082
Query 179759 CATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACG 179818
| ||||| || | | |||||||| | | ||||||||||| ||||| || ||||| |
Sbjct 22563083 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 22563142
Query 179819 CACACAACTTCCCACTCGACCTTGCTGCT 179847
| ||||||||||| || ||||| ||||||
Sbjct 22563143 CTCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 136 bits (150), Expect = 5e-27
Identities = 204/287 (71%), Gaps = 2/287 (1%)
Strand=Plus/Plus
Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920
|||||| | ||| |||| |||| | || ||| | || | || ||||||||||| ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979
||||| ||||| || | | |||||| ||||| || || | || ||| | || || ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039
||| || |||||||| | || |||| | || ||||||| | | || ||||||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099
|| ||||||||||| || | || | ||| || || || | |||| ||||| ||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTT 179146
|||||||| ||||| | ||||||||| | || || || |||||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146
>seq5
Length=25164199
Score = 138 bits (152), Expect = 1e-27
Identities = 184/256 (72%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 180663 GCAAACACCTTTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACT 180722
||||| ||||| || ||| | |||| |||| || |||||||| || || |||||
Sbjct 21599135 GCAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACC 21599194
Query 180723 GCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCAT 180782
|| || ||||| ||||| || ||||| ||| |||| ||||| || || || ||| | |||
Sbjct 21599195 GCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACAT 21599254
Query 180783 TTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGT 180842
|| || ||| | ||||| || || | ||| ||||| |||||||| | | ||
Sbjct 21599255 TTCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGC 21599314
Query 180843 CTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGAT 180902
|| ||||| ||||| ||||| || || ||||| || | ||| | |||| ||||||
Sbjct 21599315 CTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGAT 21599374
Query 180903 CCTGAGTTCGAGACGT 180918
||||| || |||||||
Sbjct 21599375 CCTGAATTTGAGACGT 21599390
>seq11
Length=21200727
Score = 89.7 bits (98), Expect = 6e-13
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 180904 CTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATGGT 180963
|||| || ||||| ||||||||||| || || || || || || || | ||||| |||
Sbjct 11535663 CTGAATTGGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGA 11535604
Query 180964 TGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAG 181023
||||| || ||||| || || ||||| | || |||||||| || ||||||||| | |
Sbjct 11535603 TGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTG 11535544
Query 181024 GTAACGC 181030
| |||||
Sbjct 11535543 GAAACGC 11535537
>seq3
Length=46202548
Score = 87.8 bits (96), Expect = 2e-12
Identities = 121/168 (72%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 179659 ATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTC 179718
|| |||||||||||| | || | || ||||| ||||| || ||||| ||||| |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 179719 AACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAAC 179778
||||| || | |||| | ||||| || || || | || ||||| || | | |||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 179779 CGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 179826
|||||| | | | ||||||||| ||||| || ||||| || ||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610255689085440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |