Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2 158 3e-33
seq1 158 3e-33
seq5 149 1e-30
seq4 147 5e-30
seq6 145 2e-29
seq8 131 4e-25
seq10 100 7e-16
seq3 100 7e-16
seq9 96.9 8e-15
seq7 84.2 5e-11
>seq2
Length=36083738
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| ||||| || || |||| ||||| ||||||| || | |||||
Sbjct 2262217 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGTCCATCC 2262276
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || ||||| || ||||||||
Sbjct 2262277 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 2262336
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| || |||||||| ||| | || || || || ||||| |||
Sbjct 2262337 TGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTC 2262396
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | ||| | |||||
Sbjct 2262397 TTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 2262428
Score = 158 bits (174), Expect = 3e-33
Identities = 153/197 (78%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| ||||| || || |||| ||||| || || | || || |||||
Sbjct 2262990 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCC 2263049
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || ||||| || ||||||||
Sbjct 2263050 TCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 2263109
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| |||| ||||| || | ||||| |||
Sbjct 2263110 TGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTC 2263169
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| ||||| || ||
Sbjct 2263170 TTGCCGGTCAATGTCTT 2263186
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
||| ||||| || || ||||| || || |||| ||||| ||||| | || || |||||
Sbjct 2262761 CAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATC 2262820
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
|| |||||||| ||||| ||||| || || || ||||| || ||||| || ||||||||
Sbjct 2262821 CTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 2262880
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|||||||| ||| || ||||||||||| || | ||||| || | ||||| ||
Sbjct 2262881 CTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGT 2262940
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||| |||| ||| || | ||| | |||||
Sbjct 2262941 CTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 2262973
Score = 141 bits (156), Expect = 2e-28
Identities = 150/198 (76%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || ||||||||||| ||||| || || |||| ||||| || || | ||
Sbjct 2262435 ACGAAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT 2262494
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|| ||||| || |||||||| ||||| ||||| || || || ||||| || ||||| ||
Sbjct 2262495 CCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCC 2262554
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||||||||| ||| | || || || |
Sbjct 2262555 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAG 2262614
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 2262615 GGTGATGGTCTTGCCTGT 2262632
Score = 107 bits (118), Expect = 5e-18
Identities = 108/139 (78%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || |||| ||||||| || | ||||| |||| ||||||||||||| |||||||||
Sbjct 20539423 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGC 20539364
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| | || | |||||| || |||||||||| |||||| |||| | | |||| ||
Sbjct 20539363 TTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGG 20539304
Query 7844 AATATTT-ACGCGTTAGCT 7861
| | ||| |||||||||||
Sbjct 20539303 AGTGTTTCACGCGTTAGCT 20539285
Score = 102 bits (112), Expect = 2e-16
Identities = 65/71 (92%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||
Sbjct 20560130 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 20560071
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 20560070 GAGTCTGACAC 20560060
>seq1
Length=43445878
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| ||||| ||||| | || | ||| ||
Sbjct 9972238 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 9972179
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||||||||| || || ||||||||
Sbjct 9972178 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 9972119
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||||||||| |||| ||||| || | ||||||||||
Sbjct 9972118 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTC 9972059
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||||| || || | ||| | ||||| ||
Sbjct 9972058 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9972024
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| ||||| ||||| | || | ||| ||
Sbjct 9981446 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 9981387
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||||||||| || || ||||||||
Sbjct 9981386 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 9981327
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||||||||| |||| ||||| || | ||||||||||
Sbjct 9981326 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTC 9981267
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||||| || || | ||| | ||||| ||
Sbjct 9981266 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 9981232
Score = 95.1 bits (104), Expect = 3e-14
Identities = 131/181 (72%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 371364 AAATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAA 371423
|| ||||||| ||||||||| | |||||| | | ||| || || || || || |||||
Sbjct 7478948 AAGTGGTAATCTATGCATAGTCATTCCAGGTCCACGCATGTTGAAGATAGTTGTTATAAA 7478889
Query 371424 GTTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATC 371483
|| |||| |||| || || || | ||||| ||||| | |||||| |||||||||||
Sbjct 7478888 ATTGATAGAACCTAAAATTGATGAAACACCTGATAGATGAAGACTAAAAATTGCTAAATC 7478829
Query 371484 GACGGAACCGCCGGAGTGAGCT-ACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCGG 371542
|| | || || || || ||| |||| |||||| ||||| || || || || || |
Sbjct 7478828 AACTGCTCCTCCAGAATG-GCTGGTAATACCACTTAAGGGCGGATAGACCGTCCACCCAG 7478770
Query 371543 T 371543
|
Sbjct 7478769 T 7478769
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 7534107 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 7534049
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 7534048 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 7534005
>seq5
Length=25164199
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| ||||| || || |||| ||||| ||||| | || | || ||
Sbjct 3097278 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCC 3097337
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| || || || |||||||||||
Sbjct 3097338 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCC 3097397
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||||||||| |||| ||||| || | |||||| |||
Sbjct 3097398 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 3097457
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
|| ||||||| || || | ||| | ||||| ||
Sbjct 3097458 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3097492
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| ||||| || || || | ||||| ||||| | || | ||||||
Sbjct 21087468 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTGCGGCCATCT 21087527
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| || |||||||||||||| ||
Sbjct 21087528 TCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTATCC 21087587
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| ||| | || || || | || || |||
Sbjct 21087588 TGGATCTTAGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTC 21087647
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| || | ||| ||
Sbjct 21087648 TTGCCAGTGAGAGTCTT 21087664
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| |||||||| || |||| ||||| || || | || | |||||||
Sbjct 21088380 AGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCT 21088439
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || || || || ||||||||
Sbjct 21088440 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 21088499
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| || ||||| || |||| || || || | || || |||
Sbjct 21088500 TGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTC 21088559
Query 225682 TTGCCCGTCAAAGTTTT 225698
||||| || | ||| ||
Sbjct 21088560 TTGCCAGTGAGAGTCTT 21088576
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||||| || || |||| ||||| || || | || || |||||
Sbjct 21088152 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 21088211
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||| ||||| || || || ||||| || ||||| || ||||||||
Sbjct 21088212 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC 21088271
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || || ||||| || || | || || || | ||||| |||
Sbjct 21088272 TGGATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTCAACCTCAAGGGTGATAGTC 21088331
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || || | || | ||||||
Sbjct 21088332 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 21088363
Score = 102 bits (112), Expect = 2e-16
Identities = 65/71 (92%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||||
Sbjct 2351444 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 2351385
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 2351384 GAGTCTGACAC 2351374
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Plus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 17384920 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 17384978
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 17384979 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 17385022
>seq4
Length=32292456
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|| || | |||||||||||| || |||||||| ||||||| ||||| || || | ||
Sbjct 28749753 CGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTG 28749694
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || |||||||||||||| ||||| || || || ||||| || || || ||
Sbjct 28749693 CGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCC 28749634
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
|||||||| |||||||| ||||||| ||||| ||||| || | || || || |
Sbjct 28749633 TCCTTGTCCTGGATCTTGGCCTTCACATTATCGATCGTGTCAGACGACTCGACCTCCAGG 28749574
Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || |||||||| || | || || | ||| | ||||||
Sbjct 28749573 GTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCAT 28749533
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||||||||| | ||||| || || |||| || ||||| || | |||
Sbjct 28749526 ACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGT 28749467
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||| || |||||||| |||||||||||||| || || ||||| || || || ||
Sbjct 28749466 ACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCC 28749407
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || || ||||| ||||||| || || || || |||| || || || ||
Sbjct 28749406 CTCCTTATCCTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAA 28749347
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | || || | ||| | |||||
Sbjct 28749346 GGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 28749305
Score = 127 bits (140), Expect = 5e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| ||||| | ||||| || || |||| || || || || | ||
Sbjct 28749982 ACGAAGGCGGAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGT 28749923
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| ||||||||||| || || || ||||| || || || ||
Sbjct 28749922 GCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCC 28749863
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || |||||||| ||||||| ||||| ||||| |||| || || || ||
Sbjct 28749862 CTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAA 28749803
Query 225672 CGTGATCGTCTTGCCCGT 225689
|||||||||||||| ||
Sbjct 28749802 GGTGATCGTCTTGCCAGT 28749785
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| ||||| | ||||| || || |||| || || || || | ||
Sbjct 28750210 ACGAAGGCGGAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGT 28750151
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| ||||||||||| || || || ||||| || || || ||
Sbjct 28750150 GCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCC 28750091
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || |||||||| ||||||| ||||| ||||| |||| || || || |
Sbjct 28750090 CTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAG 28750031
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | || || | ||| | |||||
Sbjct 28750030 GGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28749989
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| ||||| | ||||| || || |||| || || || || | ||
Sbjct 28750438 ACGAAGGCGGAGGACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGT 28750379
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| ||||||||||| || || || ||||| || || || ||
Sbjct 28750378 GCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGAGGGATGCC 28750319
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || |||||||| ||||||| ||||| ||||| |||| || || || |
Sbjct 28750318 CTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAGGACTCAACCTCCAG 28750259
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||||||| || | || || | ||| | |||||
Sbjct 28750258 GGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 28750217
Score = 107 bits (118), Expect = 5e-18
Identities = 108/139 (78%), Gaps = 1/139 (1%)
Strand=Plus/Minus
Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783
||| || |||| ||||||| || | ||||| |||| ||||||||||||| |||||||||
Sbjct 29375433 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGC 29375374
Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843
|| | || | |||||| || |||||||||| |||||| |||| | | |||| ||
Sbjct 29375373 TTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGG 29375314
Query 7844 AATATTT-ACGCGTTAGCT 7861
| | ||| |||||||||||
Sbjct 29375313 AGTGTTTCACGCGTTAGCT 29375295
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 2813545 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 2813486
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 2813485 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 2813426
Query 7855 GTTAGCT 7861
|||||||
Sbjct 2813425 GTTAGCT 2813419
Score = 93.3 bits (102), Expect = 1e-13
Identities = 95/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || || ||||| |||||||| ||||| || || |||| ||||| || |||| ||
Sbjct 3242640 ACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 3242699
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || ||||||||||| |||||||| || || || ||||| ||||| || ||
Sbjct 3242700 GCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATTCC 3242759
Query 225612 TTCC 225615
| ||
Sbjct 3242760 TGCC 3242763
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Plus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 2812878 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 2812936
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 2812937 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 2812980
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Plus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 12651352 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 12651410
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 12651411 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 12651454
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Plus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 31332824 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 31332882
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 31332883 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 31332926
>seq6
Length=30401905
Score = 145 bits (160), Expect = 2e-29
Identities = 145/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||||||||| ||||| || || |||| |||||||| || | || | |||||
Sbjct 26902612 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCC 26902553
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
||||| ||||| ||||| ||||| || ||||| ||||| || ||||| || |||||||||
Sbjct 26902552 TCTAGTTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCT 26902493
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||||||| | || || || || |||| || || || | ||||| |||
Sbjct 26902492 TGAATCTTGGCCTTCACATCGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTC 26902433
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 26902432 TTGCCAGT 26902425
Score = 143 bits (158), Expect = 6e-29
Identities = 148/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || || ||||||||||| ||||| || || |||| ||||| ||||||| || |
Sbjct 27218352 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 27218293
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
||||| || |||||||| ||||||||||| || || || ||||| || || || || |||
Sbjct 27218292 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 27218233
Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675
||||| |||||||| ||| ||| || |||||||| |||| || || || | |||
Sbjct 27218232 TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTG 27218173
Query 225676 ATCGTCTTGCCCGT 225689
|| |||||||| ||
Sbjct 27218172 ATGGTCTTGCCGGT 27218159
>seq8
Length=23026653
Score = 131 bits (144), Expect = 4e-25
Identities = 143/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|||||||| ||||| ||||| || || || | ||||| || || | || | || ||
Sbjct 4139829 AGGACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGACCTTCC 4139888
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| || || || || ||||||||
Sbjct 4139889 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCC 4139948
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| |||| ||||| || | ||||| | |
Sbjct 4139949 TGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGAC 4140008
Query 225682 TTGCCCGTCA 225691
||||| ||||
Sbjct 4140009 TTGCCGGTCA 4140018
Score = 127 bits (140), Expect = 5e-24
Identities = 148/199 (74%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| ||||| ||||| || || || | ||||| || || | || | || ||
Sbjct 4124565 AGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCC 4124624
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT--TGGTCGGGCGGAATACCTTCCTTGT 225619
|| |||||||| || |||||||| || || | | ||||| || | ||| || |||||||
Sbjct 4124625 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTCTGCTGGTCTGGGGAAATGCCCTCCTTGT 4124684
Query 225620 CTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCG 225679
| ||||||||| ||||||| |||||||||||||| | ||||| || | ||||| |
Sbjct 4124685 CCTGGATCTTTGCCTTCACATTGTCGATGGTGTCTGATGACTCCACCTCAAGGGTGATGG 4124744
Query 225680 TCTTGCCCGTCAAAGTTTT 225698
|||||| |||| ||| ||
Sbjct 4124745 ACTTGCCGGTCAGAGTCTT 4124763
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 17304402 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 17304343
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 17304342 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 17304283
Query 7855 GTTAGCT 7861
|||||||
Sbjct 17304282 GTTAGCT 17304276
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 17347517 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 17347576
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 17347577 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 17347636
Query 7855 GTTAGCT 7861
|||||||
Sbjct 17347637 GTTAGCT 17347643
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 17351563 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 17351622
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 17351623 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 17351682
Query 7855 GTTAGCT 7861
|||||||
Sbjct 17351683 GTTAGCT 17351689
Score = 98.7 bits (108), Expect = 2e-15
Identities = 96/124 (77%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625
||||||| || |||||||| || || || ||||| || || || || |||||||||||||
Sbjct 4139030 GCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCTTGGA 4139089
Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685
|||| |||||| ||||||||||| |||| ||||| || | ||||| | |||||
Sbjct 4139090 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCAAGGGTGATGGACTTGC 4139149
Query 225686 CCGT 225689
| ||
Sbjct 4139150 CGGT 4139153
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Plus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| || |||||| | |||||||| | || ||| | | ||||||
Sbjct 5840703 GAGAGGATGATCAGCCACACTGAGACTGAGACACGGCCCA-GACTCCTACAGGAGGCAGC 5840761
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 5840762 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 5840805
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Plus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 17303735 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 17303793
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 17303794 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 17303837
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 17348184 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 17348126
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 17348125 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 17348082
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 17352230 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 17352172
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 17352171 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 17352128
>seq10
Length=17164355
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 79779 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 79720
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 79719 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 79660
Query 7855 GTTAGCT 7861
|||||||
Sbjct 79659 GTTAGCT 79653
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 15971783 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 15971724
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 15971723 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 15971664
Query 7855 GTTAGCT 7861
|||||||
Sbjct 15971663 GTTAGCT 15971657
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Plus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 15971116 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 15971174
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 15971175 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 15971218
Score = 84.2 bits (92), Expect = 5e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || |||| ||||| ||||||| || | ||| ||
Sbjct 12574664 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGCCCGTCC 12574723
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || ||||| ||||| || |||
Sbjct 12574724 TCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATCCCT 12574774
>seq3
Length=46202548
Score = 100 bits (110), Expect = 7e-16
Identities = 99/127 (78%), Gaps = 1/127 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | |
Sbjct 13418547 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 13418606
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854
|||||| || |||||||||| | |||||| |||| | | |||| || ||| || ||||
Sbjct 13418607 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 13418666
Query 7855 GTTAGCT 7861
|||||||
Sbjct 13418667 GTTAGCT 13418673
Score = 96.9 bits (106), Expect = 8e-15
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696
|| |||||||||||||||| |||||||||||||||| |||||| |||| ||||||||||
Sbjct 35250835 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTACTAAGTGGTAACACGATGTATA 35250776
Query 372697 GGGTCTGACAC 372707
| |||||||||
Sbjct 35250775 GAGTCTGACAC 35250765
Score = 87.8 bits (96), Expect = 4e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || ||||| || || |||| ||||| ||||||| || | |||||
Sbjct 11348827 AGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATCC 11348768
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || ||||| | ||| ||||||
Sbjct 11348767 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGCCGGGATACCT 11348717
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/104 (81%), Gaps = 3/104 (3%)
Strand=Plus/Minus
Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826
||||| ||||||||||||| ||||||||| | |||||||| | || ||| | ||||||
Sbjct 13419214 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 13419156
Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
||||| |||| || |||||||||||||| ||| ||| ||||
Sbjct 13419155 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 13419112
>seq9
Length=22605696
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555
|| || ||||| ||||| ||||| || || || || | ||||| ||||||| || | |
Sbjct 12264465 AGCCTGAGGACCAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGC 12264406
Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615
|||||||| |||||||| || ||||| || | || ||||| || || || || ||||||
Sbjct 12264405 CCATCTTCCAGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCC 12264346
Query 225616 TTGTCTTG 225623
||||| ||
Sbjct 12264345 TTGTCCTG 12264338
Score = 96.9 bits (106), Expect = 8e-15
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 372640 GGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATAGGG 372699
|||||||||||||||| |||||||||||||||| ||||||| |||| ||| ||||||| |
Sbjct 12544196 GGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGGTGTATAGAG 12544137
Query 372700 TCTGACAC 372707
||||||||
Sbjct 12544136 TCTGACAC 12544129
Score = 87.8 bits (96), Expect = 4e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || |||| ||||| ||||||| || | |||||
Sbjct 15402860 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 15402801
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || ||||| ||||| ||||||
Sbjct 15402800 TCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATACCT 15402750
Score = 84.2 bits (92), Expect = 5e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || || | ||||| ||||||| || | |||||
Sbjct 13618179 AGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCC 13618238
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || ||||| ||||| ||||||
Sbjct 13618239 TCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGGGATACCT 13618289
Score = 84.2 bits (92), Expect = 5e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || |||| ||||| ||||||| || | |||||
Sbjct 15391453 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 15391394
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || ||||| || || ||||||
Sbjct 15391393 TCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATACCT 15391343
>seq7
Length=26479886
Score = 84.2 bits (92), Expect = 5e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || ||||| || || || || || |||| ||||| ||||||| || | ||| ||
Sbjct 22381816 AGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGCCCGTCC 22381757
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
|| ||||||||||| |||||||| || || || ||||| ||||| || |||
Sbjct 22381756 TCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATCCCT 22381706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192383174083472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |