Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq10 663 0.0
seq8 663 0.0
seq7 663 0.0
seq3 114 2e-20
>seq10
Length=17164355
Score = 663 bits (734), Expect = 0.0
Identities = 744/990 (75%), Gaps = 4/990 (0%)
Strand=Plus/Plus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
||||||| | ||||| || ||||| | ||||| || || | || ||||| || |
Sbjct 15960365 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 15960424
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
|||||| || || | ||| | ||||| |||| || || | |||||| ||||||| |
Sbjct 15960425 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 15960483
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || || || || || || ||| |||| || | | || |||||||
Sbjct 15960484 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 15960543
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| || ||||||||||| || ||||| |||| || || ||| | ||||| || || |
Sbjct 15960544 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 15960603
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
| |||||||| ||||| | ||||||||| | || || || |||||||| | || | |
Sbjct 15960604 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 15960663
Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553
| | |||||| | |||| || || || |||||||||||||||||| || || ||
Sbjct 15960664 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 15960723
Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613
|||| ||||||||||||||||| |||||| ||| || |||||||| ||||| ||||
Sbjct 15960724 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 15960783
Query 183614 CTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTA 183673
|||| ||| || | || ||| | |||||||| ||| |||||||||||| | || |
Sbjct 15960784 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 15960843
Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733
| ||| || || |||| |||| |||| ||||| |||||||| |||||||| ||||| |
Sbjct 15960844 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 15960903
Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793
| || |||||| | ||||| |||||||| ||||| ||||| || |||||||| ||||| |
Sbjct 15960904 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 15960963
Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTAT 183852
|||| |||| || | || | | | || | ||||||||||| || || || |
Sbjct 15960964 GTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 15961022
Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912
||||||| || |||||||| |||||||| || || ||||| || |||||||| || |||
Sbjct 15961023 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 15961082
Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972
|| || | |||||||| |||||| |||||||| ||||||||| | ||||||||| |
Sbjct 15961083 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 15961142
Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTT 184032
||||||||||| || || || || ||||| |||||| | ||| |||| |||||||| ||
Sbjct 15961143 GCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 15961202
Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092
|| || || || || || |||||||| || | ||||| | |||||||| || | ||
Sbjct 15961203 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 15961262
Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152
|| ||||| || | ||||||||||| |||||| |||||||| |||||||| ||||||
Sbjct 15961263 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 15961322
Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGCT 184182
||||||||||||||||| ||||| ||||||
Sbjct 15961323 GCTCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 663 bits (734), Expect = 0.0
Identities = 744/990 (75%), Gaps = 4/990 (0%)
Strand=Plus/Plus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
||||||| | ||||| || ||||| | ||||| || || | || ||||| || |
Sbjct 17290455 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 17290514
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
|||||| || || | ||| | ||||| |||| || || | |||||| ||||||| |
Sbjct 17290515 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 17290573
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || || || || || || ||| |||| || | | || |||||||
Sbjct 17290574 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 17290633
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| || ||||||||||| || ||||| |||| || || ||| | ||||| || || |
Sbjct 17290634 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 17290693
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
| |||||||| ||||| | ||||||||| | || || || |||||||| | || | |
Sbjct 17290694 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 17290753
Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553
| | |||||| | |||| || || || |||||||||||||||||| || || ||
Sbjct 17290754 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 17290813
Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613
|||| ||||||||||||||||| |||||| ||| || |||||||| ||||| ||||
Sbjct 17290814 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 17290873
Query 183614 CTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTA 183673
|||| ||| || | || ||| | |||||||| ||| |||||||||||| | || |
Sbjct 17290874 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 17290933
Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733
| ||| || || |||| |||| |||| ||||| |||||||| |||||||| ||||| |
Sbjct 17290934 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 17290993
Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793
| || |||||| | ||||| |||||||| ||||| ||||| || |||||||| ||||| |
Sbjct 17290994 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 17291053
Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTAT 183852
|||| |||| || | || | | | || | ||||||||||| || || || |
Sbjct 17291054 GTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 17291112
Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912
||||||| || |||||||| |||||||| || || ||||| || |||||||| || |||
Sbjct 17291113 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 17291172
Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972
|| || | |||||||| |||||| |||||||| ||||||||| | ||||||||| |
Sbjct 17291173 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 17291232
Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTT 184032
||||||||||| || || || || ||||| |||||| | ||| |||| |||||||| ||
Sbjct 17291233 GCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 17291292
Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092
|| || || || || || |||||||| || | ||||| | |||||||| || | ||
Sbjct 17291293 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 17291352
Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152
|| ||||| || | ||||||||||| |||||| |||||||| |||||||| ||||||
Sbjct 17291353 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 17291412
Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGCT 184182
||||||||||||||||| ||||| ||||||
Sbjct 17291413 GCTCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 515 bits (570), Expect = 5e-141
Identities = 718/1004 (72%), Gaps = 2/1004 (0%)
Strand=Plus/Minus
Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030
|||| |||||| | | | ||||| ||||| ||||| || |||||||| || | ||||
Sbjct 17282599 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 17282540
Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090
|||| ||||||| | || | || || ||| |||| || ||||| ||||| || |
Sbjct 17282539 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 17282480
Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCAG 186150
|||||||||| || |||||| ||| || | || ||| ||||| | || |||||||
Sbjct 17282479 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTAACCGCAGCAG 17282420
Query 186151 TGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 186210
| || || ||||| | | | | || ||| | | ||||| ||||| || || | |
Sbjct 17282419 TTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 17282360
Query 186211 AAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 186270
|||| ||| | | || |||| ||| | || || || |||| |||||| || ||||| |
Sbjct 17282359 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATG 17282300
Query 186271 GAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGGT 186329
| || ||||| || |||||||||||| | || || |||||| | ||| ||| | |
Sbjct 17282299 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 17282240
Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389
| || || || ||||| ||| | || ||||| || |||||||| |||||| ||||||
Sbjct 17282239 -TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTC 17282181
Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449
|| || || || || || || ||| |||||||| || || ||||| || |||||
Sbjct 17282180 CTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 17282121
Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509
|| ||| ||||| | | ||| |||||||||| || || ||||||||||| ||||| ||
Sbjct 17282120 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 17282061
Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569
|||||||| || || || | | || | |||||||| | || || ||||| | ||
Sbjct 17282060 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 17282001
Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629
|| ||||| ||||| | ||| || || || ||||| || ||| || || | |
Sbjct 17282000 GTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 17281941
Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689
|| |||| |||||||| ||||| |||||||| || || | || ||||| || |||||
Sbjct 17281940 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 17281881
Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749
|| |||| ||| |||||| |||||| | |||||||| ||||| ||||| || || |
Sbjct 17281880 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 17281821
Query 186750 GGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGAC 186809
||| | |||| | | |||||| | | || || ||||| ||||| ||||| ||||||
Sbjct 17281820 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 17281761
Query 186810 TTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAG 186869
|| || ||||| | | ||||| || |||||||| || ||||| ||||| |||||
Sbjct 17281760 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 17281701
Query 186870 AATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAA 186929
||||| || || || || ||| | ||||| ||||||||| | |||||| || ||||||
Sbjct 17281700 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 17281641
Query 186930 AACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973
|| || |||| ||||| || || | ||| | || ||||||||
Sbjct 17281640 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597
Score = 129 bits (142), Expect = 7e-25
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 183823 GAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 183882
||||||||||| || || || | |||||||| || |||||||| ||||||||
Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528
Query 183883 TACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGATCTTCCAGTATGCTTCGTTT 183942
|| || ||| | || |||||||| || ||||| || | |||||||| |||||| |||
Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588
Query 183943 AACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGCCAGTGGTCGGCATCTGGTT 184001
||||| ||||||||| | ||||| ||| | |||||||||| || || || || |||||
Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGTT 13113647
>seq7
Length=26479886
Score = 663 bits (734), Expect = 0.0
Identities = 744/990 (75%), Gaps = 4/990 (0%)
Strand=Plus/Plus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
||||||| | ||||| || ||||| | ||||| || || | || ||||| || |
Sbjct 22562184 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22562243
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
|||||| || || | ||| | ||||| |||| || || | |||||| ||||||| |
Sbjct 22562244 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22562302
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || || || || || || ||| |||| || | | || |||||||
Sbjct 22562303 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 22562362
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| || ||||||||||| || ||||| |||| || || ||| | ||||| || || |
Sbjct 22562363 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 22562422
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
| |||||||| ||||| | ||||||||| | || || || |||||||| | || | |
Sbjct 22562423 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562482
Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553
| | |||||| | |||| || || || |||||||||||||||||| || || ||
Sbjct 22562483 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 22562542
Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613
|||| ||||||||||||||||| |||||| ||| || |||||||| ||||| ||||
Sbjct 22562543 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 22562602
Query 183614 CTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTA 183673
|||| ||| || | || ||| | |||||||| ||| |||||||||||| | || |
Sbjct 22562603 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 22562662
Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733
| ||| || || |||| |||| |||| ||||| |||||||| |||||||| ||||| |
Sbjct 22562663 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 22562722
Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793
| || |||||| | ||||| |||||||| ||||| ||||| || |||||||| ||||| |
Sbjct 22562723 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 22562782
Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTAT 183852
|||| |||| || | || | | | || | ||||||||||| || || || |
Sbjct 22562783 GTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 22562841
Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912
||||||| || |||||||| |||||||| || || ||||| || |||||||| || |||
Sbjct 22562842 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 22562901
Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972
|| || | |||||||| |||||| |||||||| ||||||||| | ||||||||| |
Sbjct 22562902 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTG 22562961
Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTT 184032
||||||||||| || || || || ||||| |||||| | ||| |||| |||||||| ||
Sbjct 22562962 GCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 22563021
Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092
|| || || || || || |||||||| || | ||||| | |||||||| || | ||
Sbjct 22563022 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 22563081
Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152
|| ||||| || | ||||||||||| |||||| |||||||| |||||||| ||||||
Sbjct 22563082 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 22563141
Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGCT 184182
||||||||||||||||| ||||| ||||||
Sbjct 22563142 GCTCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 136 bits (150), Expect = 5e-27
Identities = 234/335 (70%), Gaps = 5/335 (1%)
Strand=Plus/Plus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
||||||| | ||||| || ||||| | ||||| || || | || ||||| || |
Sbjct 22561860 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 22561919
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
|||||| || || | ||| | ||||| |||| || || | |||||| ||||||| |
Sbjct 22561920 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 22561978
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || | || || | | ||| |||| || | | || |||||||
Sbjct 22561979 CTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACA 22562038
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| || ||||||||||| || ||||| |||| || || ||| | |||| || || |
Sbjct 22562039 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAA 22562098
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
| |||||||| ||||| | ||||||||| | || || || |||||||| | || | |
Sbjct 22562099 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562158
Query 183494 TCTTCCACTTCCTCAT-TGGCGT--CTTCTGCTAC 183525
| | |||||| | || ||| || ||||||| ||
Sbjct 22562159 TTCTACACTTCTTAATGTGGGGTCGCTTCTGCAAC 22562193
>seq3
Length=46202548
Score = 114 bits (126), Expect = 2e-20
Identities = 127/168 (76%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 183994 ATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATGGTTTTAACTTC 184053
|| ||||| |||||| | ||| |||| |||||||| || || || || || || || |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 184054 AACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAGACGTTCTCAAC 184113
||||| || | ||||| | |||||||| || | | || ||||| || | |||||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 184114 CGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAAC 184161
||||| ||||| |||||||| |||||||| |||||||||||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
Score = 93.3 bits (102), Expect = 5e-14
Identities = 155/222 (70%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 171000 TATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGTGTCGTGCTGGT 171059
|| || |||||||| || || || ||| | || || ||| || || ||||||||
Sbjct 44541088 TACATCCTTGATGCCGCCGAGACCGCTGGAGTGGAGCTGCCCTACTCATGCCGTGCTGGA 44541147
Query 171060 GCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAATCCGATCAATCT 171119
|| || || |||||||| || || || ||| ||| || || || || || ||| |||
Sbjct 44541148 GCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCAGATGGATCA 44541207
Query 171120 TTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCTCATATCCTACA 171179
||||||||||||| ||| ||| ||| | | | ||||| |||||||| || ||| |
Sbjct 44541208 TTCCTTGATGATGCGCAGCAGGAAGAAGGATACGTCCTGACATGCGTCTCCTACCCT--A 44541265
Query 171180 AGT--GATTGTGTAATCTTGACTGAACAGGAAGAGAACCTTT 171219
||| || || || ||| ||| | |||||| ||||||
Sbjct 44541266 AGTCCGACTGCGTCATCCATACTCACAAGGAAGGAGACCTTT 44541307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621995067274560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |