Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_031242.1
Length=174307
Score E
Sequences producing significant alignments: (Bits) Value
seq10 652 0.0
seq8 652 0.0
seq7 652 0.0
seq5 138 1e-27
seq3 105 7e-18
>seq10
Length=17164355
Score = 652 bits (722), Expect = 0.0
Identities = 741/989 (75%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
||||| |||||| ||||| ||||| || ||| | || |||| |||||||| || ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045
||||| |||| ||| | | | || ||| | ||| || || ||||||||||||| ||| |
Sbjct 15960426 ATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCTGCCC 15960483
Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105
|||| || || || ||||| || || || || || ||||||| | | || |||||||
Sbjct 15960484 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 15960543
Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165
| || ||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| |
Sbjct 15960544 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 15960603
Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225
| |||||||| ||| | | || || ||| | ||||| || ||||||| | || |||
Sbjct 15960604 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 15960663
Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285
| | |||||| | |||| | | ||| |||||||||||||||||||| || ||
Sbjct 15960664 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 15960723
Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345
|||| |||||||||||||||||| || ||||| || |||||||| || || || | |
Sbjct 15960724 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 15960783
Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405
| || ||| || | || ||| | |||||||| ||||||||||| |||||| | || |
Sbjct 15960784 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 15960843
Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465
| ||||| || ||||||| ||| | || |||||||| ||||| |||||||| ||||| |
Sbjct 15960844 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 15960903
Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525
| || || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| |
Sbjct 15960904 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 15960963
Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585
|||| |||| || ||| || | | || ||||| ||||| || || || | |
Sbjct 15960964 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 15961023
Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645
|||||| |||||||| || ||||| || || || || || |||||||| ||||| ||||
Sbjct 15961024 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 15961083
Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705
| || | || |||||||| ||| || |||||||| ||||| | ||||||||| | |
Sbjct 15961084 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 15961143
Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765
| || |||||||| || || || ||||| |||||| | || |||| || ||||| ||||
Sbjct 15961144 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 15961203
Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825
| || ||||| ||||| |||||||| || | | ||| | || ||||| || | || |
Sbjct 15961204 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 15961263
Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885
| ||||| || | ||||||||||| ||| || |||||||| |||||||| |||||||
Sbjct 15961264 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 15961323
Query 164886 CTCACAACTTCCCTCTCGACCTTGCTGCT 164914
|||||||||||||||| ||||| ||||||
Sbjct 15961324 CTCACAACTTCCCTCTAGACCTAGCTGCT 15961352
>seq8
Length=23026653
Score = 652 bits (722), Expect = 0.0
Identities = 741/989 (75%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
||||| |||||| ||||| ||||| || ||| | || |||| |||||||| || ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045
||||| |||| ||| | | | || ||| | ||| || || ||||||||||||| ||| |
Sbjct 17290516 ATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCTGCCC 17290573
Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105
|||| || || || ||||| || || || || || ||||||| | | || |||||||
Sbjct 17290574 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 17290633
Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165
| || ||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| |
Sbjct 17290634 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 17290693
Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225
| |||||||| ||| | | || || ||| | ||||| || ||||||| | || |||
Sbjct 17290694 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 17290753
Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285
| | |||||| | |||| | | ||| |||||||||||||||||||| || ||
Sbjct 17290754 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 17290813
Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345
|||| |||||||||||||||||| || ||||| || |||||||| || || || | |
Sbjct 17290814 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 17290873
Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405
| || ||| || | || ||| | |||||||| ||||||||||| |||||| | || |
Sbjct 17290874 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 17290933
Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465
| ||||| || ||||||| ||| | || |||||||| ||||| |||||||| ||||| |
Sbjct 17290934 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 17290993
Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525
| || || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| |
Sbjct 17290994 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 17291053
Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585
|||| |||| || ||| || | | || ||||| ||||| || || || | |
Sbjct 17291054 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 17291113
Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645
|||||| |||||||| || ||||| || || || || || |||||||| ||||| ||||
Sbjct 17291114 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 17291173
Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705
| || | || |||||||| ||| || |||||||| ||||| | ||||||||| | |
Sbjct 17291174 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 17291233
Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765
| || |||||||| || || || ||||| |||||| | || |||| || ||||| ||||
Sbjct 17291234 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 17291293
Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825
| || ||||| ||||| |||||||| || | | ||| | || ||||| || | || |
Sbjct 17291294 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 17291353
Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885
| ||||| || | ||||||||||| ||| || |||||||| |||||||| |||||||
Sbjct 17291354 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 17291413
Query 164886 CTCACAACTTCCCTCTCGACCTTGCTGCT 164914
|||||||||||||||| ||||| ||||||
Sbjct 17291414 CTCACAACTTCCCTCTAGACCTAGCTGCT 17291442
Score = 574 bits (636), Expect = 5e-159
Identities = 736/1008 (73%), Gaps = 6/1008 (1%)
Strand=Plus/Minus
Query 165165 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 165224
||||||||| | ||| |||||||| |||||||| || |||||||| || | ||||||
Sbjct 17282597 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 17282538
Query 165225 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGG 165284
|| ||||||| | ||| | || |||||| |||| ||||| ||||| || || ||||
Sbjct 17282537 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 17282478
Query 165285 TATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 165342
||||| || ||| | |||||||||||| | || ||| |||| ||||||| | || ||||
Sbjct 17282477 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCAGCAG 17282420
Query 165343 TTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTC 165402
|||| || || || | | | | || ||| | |||| |||||||| || || | |
Sbjct 17282419 TTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 17282360
Query 165403 AAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 165462
||||||| || | || ||||| ||| | || || || ||||||||||| || ||||| |
Sbjct 17282359 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATG 17282300
Query 165463 GAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGT 165521
| || |||||||| |||||||||||| | || || |||||||| || || || || |
Sbjct 17282299 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 17282240
Query 165522 ATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTT 165581
| || ||||| ||||| ||| | |||||||| || || ||||| || ||| || ||
Sbjct 17282239 -TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTC 17282181
Query 165582 CTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCA 165641
|| || ||||| ||||| ||||| |||||||| || ||| || || || |||||
Sbjct 17282180 CTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 17282121
Query 165642 ATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCAC 165701
|| || |||||| | |||||| ||||||| || ||||| |||||| |||| || |||||
Sbjct 17282120 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 17282061
Query 165702 ATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACA 165761
|||||||| || || || | ||||||| || |||| | || |||||||| | ||
Sbjct 17282060 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 17282001
Query 165762 GTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGT 165821
|| || || ||| | | ||| || ||||| ||||| || ||| || ||| |
Sbjct 17282000 GTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 17281941
Query 165822 ACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTT 165881
||||| | || ||||||||||| |||||||| ||||| || || ||||| || || |||
Sbjct 17281940 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 17281881
Query 165882 GGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATG 165941
||| ||||||| |||||| |||||| | || ||||||||||| ||||| || ||||
Sbjct 17281880 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 17281821
Query 165942 GGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGAT 166001
|| | |||| ||| ||||||| | | || || || || || || ||||| |||||
Sbjct 17281820 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 17281761
Query 166002 TTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAA 166061
|| || || ||||| || | || || || ||||| || ||||| || ||||| || |||
Sbjct 17281760 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 17281701
Query 166062 AACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAG 166121
|| || || | || || || | ||||| ||| |||| || || || ||||||||
Sbjct 17281700 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 17281641
Query 166122 AACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169
|| || | |||||||| || || | ||| | || ||||| ||||||
Sbjct 17281640 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 17281593
>seq7
Length=26479886
Score = 652 bits (722), Expect = 0.0
Identities = 741/989 (75%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
||||| |||||| ||||| ||||| || ||| | || |||| |||||||| || ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045
||||| |||| ||| | | | || ||| | ||| || || ||||||||||||| ||| |
Sbjct 22562245 ATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCTGCCC 22562302
Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105
|||| || || || ||||| || || || || || ||||||| | | || |||||||
Sbjct 22562303 CTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACA 22562362
Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165
| || ||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| |
Sbjct 22562363 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 22562422
Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225
| |||||||| ||| | | || || ||| | ||||| || ||||||| | || |||
Sbjct 22562423 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562482
Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285
| | |||||| | |||| | | ||| |||||||||||||||||||| || ||
Sbjct 22562483 TTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCC 22562542
Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345
|||| |||||||||||||||||| || ||||| || |||||||| || || || | |
Sbjct 22562543 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 22562602
Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405
| || ||| || | || ||| | |||||||| ||||||||||| |||||| | || |
Sbjct 22562603 CTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 22562662
Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465
| ||||| || ||||||| ||| | || |||||||| ||||| |||||||| ||||| |
Sbjct 22562663 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 22562722
Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525
| || || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| |
Sbjct 22562723 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 22562782
Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585
|||| |||| || ||| || | | || ||||| ||||| || || || | |
Sbjct 22562783 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 22562842
Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645
|||||| |||||||| || ||||| || || || || || |||||||| ||||| ||||
Sbjct 22562843 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 22562902
Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705
| || | || |||||||| ||| || |||||||| ||||| | ||||||||| | |
Sbjct 22562903 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 22562962
Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765
| || |||||||| || || || ||||| |||||| | || |||| || ||||| ||||
Sbjct 22562963 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 22563022
Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825
| || ||||| ||||| |||||||| || | | ||| | || ||||| || | || |
Sbjct 22563023 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 22563082
Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885
| ||||| || | ||||||||||| ||| || |||||||| |||||||| |||||||
Sbjct 22563083 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 22563142
Query 164886 CTCACAACTTCCCTCTCGACCTTGCTGCT 164914
|||||||||||||||| ||||| ||||||
Sbjct 22563143 CTCACAACTTCCCTCTAGACCTAGCTGCT 22563171
Score = 159 bits (176), Expect = 4e-34
Identities = 225/311 (72%), Gaps = 4/311 (1%)
Strand=Plus/Plus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
||||| |||||| ||||| ||||| || ||| | || |||| |||||||| || ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045
||||| |||| ||| | | | || ||| | ||| || || ||||||||||||| ||| |
Sbjct 22561921 ATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCTGCCC 22561978
Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105
|||| || || || |||| || || | | || ||||||| | | || |||||||
Sbjct 22561979 CTCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACA 22562038
Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165
| || ||||||||||| |||| ||| ||||| || ||||| || |||| ||||| |
Sbjct 22562039 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAA 22562098
Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225
| |||||||| ||| | | || || ||| | ||||| || ||||||| | || |||
Sbjct 22562099 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 22562158
Query 164226 TGTTCCACTTC 164236
| | ||||||
Sbjct 22562159 TTCTACACTTC 22562169
>seq5
Length=25164199
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 165822 ACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTT 165881
||||| | || ||||||||||| || ||||| ||||| || || ||||| || || |||
Sbjct 21599162 ACTCAAGCTGAAGAAACTTATTCAATAGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 21599221
Query 165882 GGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATG 165941
||| ||||||| |||||| |||||| | || ||||||||||| ||||| || ||||
Sbjct 21599222 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 21599281
Query 165942 GGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGAT 166001
|| |||| ||| ||||||| | | || || || || || || ||||| |||||
Sbjct 21599282 GGTTAATGGATGAGTACTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGTGCCTATGAC 21599341
Query 166002 TTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGT 166050
|| || || ||| | || | || | || ||||| || ||||| ||||
Sbjct 21599342 TTCGTTTCCCAGAAAATCCGTGCAGTGGAAGATCCTGAATTTGAGACGT 21599390
>seq3
Length=46202548
Score = 105 bits (116), Expect = 7e-18
Identities = 125/168 (74%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 164726 ATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 164785
|| ||||| |||||| | || |||| || ||||| ||||| || ||||| ||||| |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 164786 AACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAAC 164845
||||| || | | ||| | || ||||| || | | || ||||| || | |||||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 164846 CGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGCTCACAAC 164893
||||| ||| | |||||||| |||||||| |||||||||||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557586868052160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |