Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq10 639 2e-178
seq8 639 2e-178
seq7 639 2e-178
seq5 127 2e-24
seq3 114 2e-20
>seq10
Length=17164355
Score = 639 bits (708), Expect = 2e-178
Identities = 742/995 (75%), Gaps = 4/995 (0%)
Strand=Plus/Plus
Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657
||||| |||||| |||| |||| | || ||||| || |||| ||||||||||| ||
Sbjct 15960366 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 15960425
Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716
||||||||||| | | | || || ||||| || || |||| ||| ||||||| ||
Sbjct 15960426 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 15960484
Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776
||| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 15960485 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 15960544
Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836
|| || |||||||| || ||||| ||||| || || || | ||||| || || ||
Sbjct 15960545 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 15960604
Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896
|||||||| || ||| | ||||||||| | |||||||| ||||||| | || || |
Sbjct 15960605 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 15960664
Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956
| |||||| | | ||| | | || |||||||||||||||||||| || |||
Sbjct 15960665 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 15960724
Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016
|| ||||||||||| ||||| ||| ||||| || ||||| || || || || | ||
Sbjct 15960725 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 15960784
Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076
||| ||| | |||| ||| | |||||||| ||||||||| | |||||| | || ||
Sbjct 15960785 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 15960844
Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136
||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| ||
Sbjct 15960845 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 15960904
Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196
|| |||||||| || || |||||||| || || ||||| || |||||||| ||||| ||
Sbjct 15960905 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 15960964
Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255
||| |||| || | || | | | || | |||||||| || |||||| | || | |
Sbjct 15960965 TTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 15961023
Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315
|||||| || |||||||| |||||||| || || || || || ||||||||||| || |
Sbjct 15961024 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 15961083
Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375
| || | ||||||||||| || || |||||||| ||||| | ||||||||| | |
Sbjct 15961084 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 15961143
Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435
| || |||||||| || || || |||||||||||| | ||| |||| || ||||| ||||
Sbjct 15961144 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 15961203
Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495
| || ||||| ||||| |||||||| || | | ||||| || || || | || |
Sbjct 15961204 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 15961263
Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555
| ||||| || | ||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct 15961264 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 15961323
Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590
|||||||||||||||| ||||| |||||| ||||
Sbjct 15961324 CTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAA 15961358
>seq8
Length=23026653
Score = 639 bits (708), Expect = 2e-178
Identities = 742/995 (75%), Gaps = 4/995 (0%)
Strand=Plus/Plus
Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657
||||| |||||| |||| |||| | || ||||| || |||| ||||||||||| ||
Sbjct 17290456 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 17290515
Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716
||||||||||| | | | || || ||||| || || |||| ||| ||||||| ||
Sbjct 17290516 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 17290574
Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776
||| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 17290575 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 17290634
Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836
|| || |||||||| || ||||| ||||| || || || | ||||| || || ||
Sbjct 17290635 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 17290694
Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896
|||||||| || ||| | ||||||||| | |||||||| ||||||| | || || |
Sbjct 17290695 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 17290754
Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956
| |||||| | | ||| | | || |||||||||||||||||||| || |||
Sbjct 17290755 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 17290814
Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016
|| ||||||||||| ||||| ||| ||||| || ||||| || || || || | ||
Sbjct 17290815 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 17290874
Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076
||| ||| | |||| ||| | |||||||| ||||||||| | |||||| | || ||
Sbjct 17290875 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 17290934
Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136
||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| ||
Sbjct 17290935 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 17290994
Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196
|| |||||||| || || |||||||| || || ||||| || |||||||| ||||| ||
Sbjct 17290995 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 17291054
Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255
||| |||| || | || | | | || | |||||||| || |||||| | || | |
Sbjct 17291055 TTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 17291113
Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315
|||||| || |||||||| |||||||| || || || || || ||||||||||| || |
Sbjct 17291114 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 17291173
Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375
| || | ||||||||||| || || |||||||| ||||| | ||||||||| | |
Sbjct 17291174 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 17291233
Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435
| || |||||||| || || || |||||||||||| | ||| |||| || ||||| ||||
Sbjct 17291234 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 17291293
Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495
| || ||||| ||||| |||||||| || | | ||||| || || || | || |
Sbjct 17291294 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 17291353
Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555
| ||||| || | ||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct 17291354 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 17291413
Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590
|||||||||||||||| ||||| |||||| ||||
Sbjct 17291414 CTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAA 17291448
Score = 495 bits (548), Expect = 4e-135
Identities = 722/1015 (71%), Gaps = 4/1015 (0%)
Strand=Plus/Minus
Query 178839 TTTGATGTACTCGATGACTGGCTTAAGC-GTGATCGGTTCGTTTTTGTTGGTTGGTCAGG 178897
|||||| | | || |||||| ||| | | || || || |||||||| || ||||| ||
Sbjct 17282609 TTTGATATTATGGACGACTGG-TTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGG 17282551
Query 178898 TCTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATT 178957
|| | || || ||| |||||| | || | || |||||| | || || ||||| ||
Sbjct 17282550 CCTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTT 17282491
Query 178958 CGTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCT 179017
|| || || |||||||| || || | || ||| ||| | || || || |||||| |
Sbjct 17282490 TGTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTT 17282431
Query 179018 TACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGG 179077
|| || || || || || ||||| | | | | ||| || | | || ||||||||
Sbjct 17282430 AACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGG 17282371
Query 179078 TCCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGT 179137
|| ||||| || || ||||| || ||| ||| | || || || ||| |||||||
Sbjct 17282370 CCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGT 17282311
Query 179138 GGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG 179197
|| ||||| || || || || || |||||||||||| | || || |||||| | || ||
Sbjct 17282310 TGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 17282251
Query 179198 -TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTG 179256
||| || | | || ||||| |||||||| | || ||||| ||||| ||||| ||||
Sbjct 17282250 GTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTG 17282192
Query 179257 TGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTG 179316
| || || || || || ||||| || || || ||| ||||||||||||||| ||||
Sbjct 17282191 TTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTG 17282132
Query 179317 GAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCA 179376
| || |||||||| || || ||| | |||||| | || || || || || |||||| | |
Sbjct 17282131 GCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGA 17282072
Query 179377 ACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTC 179436
|||| || || |||||||| || || || | | |||| || |||| || || ||||
Sbjct 17282071 ACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 17282012
Query 179437 ATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGG 179496
|||| || || || || ||||| || ||||| ||| |||| ||||||| ||| |
Sbjct 17282011 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCG 17281952
Query 179497 CATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGT 179556
| || | || || |||| || || || ||||| ||||| || || || || || ||||
Sbjct 17281951 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 17281892
Query 179557 CTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTG 179616
| || ||||||||| | || || |||||| |||||| |||||||||||||| | ||||
Sbjct 17281891 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 17281832
Query 179617 TTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTA 179676
| || |||| ||| | |||| | ||||| | | || || || || |||||
Sbjct 17281831 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 17281772
Query 179677 GAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGT 179736
| || |||||||| ||||| || || ||| | || || || |||||||| || ||||| |
Sbjct 17281771 GTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTT 17281712
Query 179737 TCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATC 179796
|||| ||||| || || || || || || ||| | ||||| ||||||||| | ||||
Sbjct 17281711 TCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATC 17281652
Query 179797 AACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851
| || |||||||| || |||| ||||| || || | ||| | || ||||||||
Sbjct 17281651 AGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 17281597
Score = 120 bits (132), Expect = 4e-22
Identities = 135/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 178225 GAAACCACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 178284
|||||||| || |||||| | || | |||||||| || |||||||| ||||||||
Sbjct 13113469 GAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAAGAGACT 13113528
Query 178285 TACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 178344
|| || || | || ||||||||||| || || || | ||||||||||| || ||
Sbjct 13113529 TATAATATTATGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTT 13113588
Query 178345 AACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTC 178404
|||||||| ||||| | ||||| ||| | || || |||| ||| || || || ||||||
Sbjct 13113589 AACAACTCTCGTTCTTTACACTTTTTCTTGGCTGCTTGGCATGTAGTAGGGATTTGGTTC 13113648
Query 178405 A 178405
|
Sbjct 13113649 A 13113649
>seq7
Length=26479886
Score = 639 bits (708), Expect = 2e-178
Identities = 742/995 (75%), Gaps = 4/995 (0%)
Strand=Plus/Plus
Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657
||||| |||||| |||| |||| | || ||||| || |||| ||||||||||| ||
Sbjct 22562185 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22562244
Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716
||||||||||| | | | || || ||||| || || |||| ||| ||||||| ||
Sbjct 22562245 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22562303
Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776
||| || || || || || || ||||| || || ||||||| | | || || |||||
Sbjct 22562304 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTACGGAAACAA 22562363
Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836
|| || |||||||| || ||||| ||||| || || || | ||||| || || ||
Sbjct 22562364 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 22562423
Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896
|||||||| || ||| | ||||||||| | |||||||| ||||||| | || || |
Sbjct 22562424 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 22562483
Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956
| |||||| | | ||| | | || |||||||||||||||||||| || |||
Sbjct 22562484 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 22562543
Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016
|| ||||||||||| ||||| ||| ||||| || ||||| || || || || | ||
Sbjct 22562544 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 22562603
Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076
||| ||| | |||| ||| | |||||||| ||||||||| | |||||| | || ||
Sbjct 22562604 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 22562663
Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136
||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| ||
Sbjct 22562664 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCC 22562723
Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196
|| |||||||| || || |||||||| || || ||||| || |||||||| ||||| ||
Sbjct 22562724 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 22562783
Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255
||| |||| || | || | | | || | |||||||| || |||||| | || | |
Sbjct 22562784 TTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 22562842
Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315
|||||| || |||||||| |||||||| || || || || || ||||||||||| || |
Sbjct 22562843 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 22562902
Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375
| || | ||||||||||| || || |||||||| ||||| | ||||||||| | |
Sbjct 22562903 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGG 22562962
Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435
| || |||||||| || || || |||||||||||| | ||| |||| || ||||| ||||
Sbjct 22562963 CTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 22563022
Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495
| || ||||| ||||| |||||||| || | | ||||| || || || | || |
Sbjct 22563023 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 22563082
Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555
| ||||| || | ||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct 22563083 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 22563142
Query 178556 CTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590
|||||||||||||||| ||||| |||||| ||||
Sbjct 22563143 CTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAA 22563177
Score = 154 bits (170), Expect = 2e-32
Identities = 208/287 (72%), Gaps = 2/287 (1%)
Strand=Plus/Plus
Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657
||||| |||||| |||| |||| | || ||||| || |||| ||||||||||| ||
Sbjct 22561861 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 22561920
Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716
||||||||||| | | | || || ||||| || || |||| ||| ||||||| ||
Sbjct 22561921 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 22561979
Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776
||| || || || || | || |||| | || ||||||| | | || || |||||
Sbjct 22561980 TCCAGTAGATATTGATGATATTCGTGGGCATGTTTCTGGTTCTTTACTTTACGGAAACAA 22562039
Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836
|| || |||||||| || ||||| ||||| || || || | |||| || || ||
Sbjct 22562040 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGAACTTTTACCCAAT 22562099
Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTT 177883
|||||||| || ||| | ||||||||| | |||||||| |||||||
Sbjct 22562100 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 22562146
>seq5
Length=25164199
Score = 127 bits (140), Expect = 2e-24
Identities = 181/255 (71%), Gaps = 0/255 (0%)
Strand=Plus/Plus
Query 179482 CAAATACATTCAAGGCATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTG 179541
||||||| ||| || || | || || |||| || || || ||||| || || || |
Sbjct 21599136 CAAATACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATAGTCACCG 21599195
Query 179542 CCAACCGTTTCTGGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATT 179601
| || || || ||||| || ||||||||| | || || |||||| |||||| ||||||
Sbjct 21599196 CTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATT 21599255
Query 179602 TCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTC 179661
|||||||| | ||||| || |||| ||| |||| || ||||| | | || |
Sbjct 21599256 TCTTTATGCTATTTGTACCGGTCACCGGTTAATGGATGAGTACTATTGGCGTAGTCGGCC 21599315
Query 179662 TTGCACTTAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATC 179721
| || || ||||| | || |||||||| ||||| || | ||| | || | || ||||
Sbjct 21599316 TGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGAAAATCCGTGCAGTGGAAGATC 21599375
Query 179722 CTGAGTTCGAGACGT 179736
|||| || |||||||
Sbjct 21599376 CTGAATTTGAGACGT 21599390
>seq3
Length=46202548
Score = 114 bits (126), Expect = 2e-20
Identities = 127/168 (76%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 178396 ATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 178455
|| |||||||||||| | ||| |||| || ||||| ||||| || ||||| ||||| |||
Sbjct 10578798 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 10578739
Query 178456 AACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAAC 178515
||||| || | | ||||| || || || | | || ||||| || | |||||
Sbjct 10578738 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 10578680
Query 178516 CGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAAC 178563
||||| ||||| ||||||||| |||||||| |||||||||||| ||
Sbjct 10578679 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 10578632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596234987198080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |