Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20longistaminata_20[genbank_20GCA_5F001514335.2_202016-01-21]
9,688 sequences; 362,063,720 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq2 165 2e-35
seq5 156 1e-32
seq6 154 4e-32
seq8 147 5e-30
seq4 147 5e-30
seq1 147 5e-30
seq9 89.7 1e-12
seq10 87.8 4e-12
seq7 87.8 4e-12
>seq2
Length=36083738
Score = 165 bits (182), Expect = 2e-35
Identities = 160/206 (78%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || |||||||| || || |||||||| ||||| || ||||| |||
Sbjct 2262653 CAGATCTTTGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTTGAGAGCTCGGAC 2262594
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 2262593 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 2262534
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| ||||| ||||| || || ||| ||
Sbjct 2262533 CGCCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAACATC 2262474
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 2262473 CAGAAGGAGTCCACCCTCCACCTTGT 2262448
Score = 163 bits (180), Expect = 7e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||||| || || || || |||||||| |||||||| || |||
Sbjct 2262970 CAGATCTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTGGAGTCTTCTGAC 2262911
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || || || || ||||||||
Sbjct 2262910 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAG 2262851
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| ||||| |||||||| || ||| ||
Sbjct 2262850 CGCCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCCGACTACAACATC 2262791
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || || || || || ||||||||| || | || ||
Sbjct 2262790 CAGAAGGAGTCCACCCTTCATCTTGTTCTGCGCCTAAG 2262753
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || || || ||||||||||||||||| ||| |||
Sbjct 2263198 CAGATCTTTGTGAAGACATTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCCTCTGAC 2263139
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || || || |||||||||||
Sbjct 2263138 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 2263079
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| ||||| ||||| || || ||| ||
Sbjct 2263078 CGTCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAACATC 2263019
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 2263018 CAGAAGGAGTCCACCCTCCACCTTGT 2262993
>seq5
Length=25164199
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||| || |||||||| ||| |||
Sbjct 3097486 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTCGGAC 3097427
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| ||||| ||||| |||||||||||
Sbjct 3097426 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAGCAG 3097367
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || || ||||| || ||| ||
Sbjct 3097366 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 3097307
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 3097306 CAGAAGGAGTCCACCCTCCACCTCGT 3097281
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| |||||||| || || || || ||||| ||||| || ||| ||
Sbjct 21088588 CAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCGGAT 21088529
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || || ||||| |||||||| || |||||||| |||||||||||
Sbjct 21088528 ACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAGCAG 21088469
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||||||||| | || ||||| || || ||| ||
Sbjct 21088468 CGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGGCGCACGCTTGCTGACTACAACATC 21088409
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || || || |||||
Sbjct 21088408 CAGAAGGAATCCACCCTCCACCTTGT 21088383
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || |||||||| || || || || || || ||||| || ||||| |||
Sbjct 21087676 CAGATCTTTGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCCGAC 21087617
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| ||||| || ||||| || || || ||||||||
Sbjct 21087616 ACCATCGACAATGTGAAGGCTAAGATCCAGGATAAGGAAGGTATTCCCCCAGACCAGCAG 21087557
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| |||||||| | || || ||||| || ||| |
Sbjct 21087556 CGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCGCCGACTACAACATT 21087497
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 21087496 CAGAAGGAGTCCACCCTCCACCTGGT 21087471
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || || || |||||||| ||||| || || ||
Sbjct 21088360 CAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCTGAT 21088301
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || |||||| |||||||| || || || || |||||||||||
Sbjct 21088300 ACCATTGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAGCAG 21088241
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || |||||||| ||||| ||||| ||||| || || ||| ||
Sbjct 21088240 CGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACAACATC 21088181
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 21088180 CAGAAGGAGTCCACCCTTCACCTTGT 21088155
>seq6
Length=30401905
Score = 154 bits (170), Expect = 4e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| || || || |||||||||||||| || ||| |||
Sbjct 27218138 CAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGAC 27218197
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 27218198 ACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 27218257
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || ||||| | || || ||||| || ||| ||
Sbjct 27218258 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCCGACTACAACATC 27218317
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || || || || || || ||||| | || |||||
Sbjct 27218318 CAGAAGGAGTCCACCCTCCACCTTGTGCTCAGGCTCAG 27218355
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| || || || |||||||||||||| || ||| ||
Sbjct 26902404 CAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCTGAT 26902463
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || | || || |||||||| ||||| || || || || || |||||||||
Sbjct 26902464 ACAATTGACGATGTGAAGGCCAAGATTCAAGACAAGGAGGGCATTCCACCTGACCAGCAA 26902523
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || || || || ||||| | || || || ||||| ||| ||
Sbjct 26902524 CGTCTCATCTTTGCTGGCAAGCAACTAGAGGATGGCCGCACCCTCGCGGATTACAACATC 26902583
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 26902584 CAGAAGGAGTCCACCCTCCACCTTGT 26902609
Score = 114 bits (126), Expect = 3e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || || || || || || || || || ||||| || || ||
Sbjct 26902860 CAGATTTTTGTCAAGACCCTGACCGGCAAGACCATTACGCTTGAGGTTGAGTCTTCTGAT 26902919
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| |||||||| || || || || |||||||||||
Sbjct 26902920 ACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAGCAG 26902979
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || |||||||| |||||| | || || || ||||| ||| |
Sbjct 26902980 CGCCTCATCTTTGCAGGCAAGCAGCTCGAGGATGGACGCACCCTGGCTGATTACAACATT 26903039
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || |||| || ||
Sbjct 26903040 CAGAAGGAGTCCACCTTGCACCTGGT 26903065
Score = 96.9 bits (106), Expect = 8e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 178009 TTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGC 178068
||||||||||||| || || || || ||||||||| | || || ||||| || || || |
Sbjct 25234247 TTCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGCAAC 25234306
Query 178069 TCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
| ||||||||| | || | || ||||| ||| | || ||||| ||||| || ||| | |
Sbjct 25234307 TGGAAGATGGACGTACATTAGCTGATTACAACATTCAGAAAGAGTCAACGCTCCATTTGG 25234366
Query 178129 TTTTGAGACTCAG 178141
| |||| |||||
Sbjct 25234367 TCCTGAGGCTCAG 25234379
>seq8
Length=23026653
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || || || | |||||||| |||||||| ||| |||
Sbjct 4140037 CAGATCTTTGTGAAGACCCTGACCGGCAAGTCCATCACCCTTGAGGTGGAGTCCTCGGAC 4139978
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || |||||||| ||||||||
Sbjct 4139977 ACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCTCCTGACCAGCAG 4139918
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || ||||| || || ||| |
Sbjct 4139917 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGAAGGTCGCACCCTTGCTGACTACAACATT 4139858
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||||||
Sbjct 4139857 CAGAAGGAGTCCACCCTCCATCTTGT 4139832
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| ||||| || || || | |||||||| |||||||| ||||||
Sbjct 4124775 CAGATCTTTGTGAAGACTCTGACCGGCAAGTCCATCACCCTTGAGGTGGAGTCATCAGAC 4124716
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC-- 178041
|||||||| || || || |||||| |||||||| || || || | || |||||||
Sbjct 4124715 ACCATCGACAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATTTCCCCAGACCAGCAG 4124656
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || || ||||||||||| || |||||||| || ||| | || ||||| || || |||
Sbjct 4124655 AGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGAAGGACGCACCCTTGCTGACTACAACA 4124596
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
| || || || || || || ||||||||
Sbjct 4124595 TTCAGAAGGAGTCCACCCTCCATCTTGT 4124568
Score = 113 bits (124), Expect = 1e-19
Identities = 112/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || || || | |||||||| |||||||| ||| |||
Sbjct 4139174 CAGATCTTTGTGAAGACCCTAACCGGCAAGTCCATCACCCTTGAGGTGGAGTCCTCGGAC 4139115
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| || ||||| || || |||||||| ||||||||
Sbjct 4139114 ACCATCGACAACGTGAAGGCGAAGATCCAAGACAAGGAGGGGATCCCTCCTGACCAGCAG 4139055
Query 178044 CGACTTATCTTCGCCGGAAAACAGC 178068
|| || ||||||||||| || ||||
Sbjct 4139054 CGCCTCATCTTCGCCGGCAAGCAGC 4139030
Score = 86.0 bits (94), Expect = 2e-11
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
||||||| ||||| || || | || ||||||||||||||| || || ||||| ||||
Sbjct 4143652 TCGTGAAGACTCTGACCGGCATCACCATCACCCTCGAGGTGAAACCATCCGACACGATCG 4143593
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
| |||| || |||||||||||||| ||||| |||| | ||||||||
Sbjct 4143592 ACGACGTGAAGGCGAAGATTCAGGACAAGGAAGGCATCCGCTCTGACCAGCA 4143541
>seq4
Length=32292456
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || |||||| | ||||| || ||| ||
Sbjct 28749308 CAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCCGAT 28749367
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||||||||| || || || |||||||||||||||||
Sbjct 28749368 ACGATTGACAATGTGAAGGCTAAGATTCAGGATAAGGAGGGCATCCCTCCGGACCAGCAG 28749427
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||||| || ||||| | ||||| || ||||||||| ||
Sbjct 28749428 CGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAACATC 28749487
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || |||| |||||
Sbjct 28749488 CAGAAGGAGTCCACCTTGCACCTTGT 28749513
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||||||||||||||| ||| |||
Sbjct 3242953 CAGATCTTCGTGAAGACCCTGACTGGGAAGACCATCACCCTCGAGGTGGAGAGCAGCGAC 3242894
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| || ||||| ||||| |||||||| || ||
Sbjct 3242893 ACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGG 3242853
>seq1
Length=43445878
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || |||||||| || |||||||| ||| |||
Sbjct 9972030 CAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCCTCGGAC 9972089
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || ||||| || ||||||||
Sbjct 9972090 ACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGACCAGCAG 9972149
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || | || || ||||| || ||| ||
Sbjct 9972150 CGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTACAACATC 9972209
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 9972210 CAGAAGGAGTCGACCCTCCACCTGGT 9972235
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || |||||||| || |||||||| ||| |||
Sbjct 9981238 CAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCCTCGGAC 9981297
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || ||||| || ||||||||
Sbjct 9981298 ACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGACCAGCAG 9981357
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || | || || ||||| || ||| ||
Sbjct 9981358 CGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTACAACATC 9981417
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 9981418 CAGAAGGAGTCGACCCTCCACCTGGT 9981443
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||| || |||||||| ||| |||
Sbjct 21648299 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGAGCAGCGAC 21648240
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||| |||||||||| ||| | |||||||| || || ||||| |||||||||||
Sbjct 21648239 ACGATCCAGAACGTCAAGGCGAAGGTGCAGGACAAGGAGGGGATCCCGCCGGACCAGCAG 21648180
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || | || || ||||| || ||| ||
Sbjct 21648179 CGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGGCCGACTACAACATC 21648120
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 21648119 CAGAAGGAGTCGACGCTGCACCTGGT 21648094
Score = 114 bits (126), Expect = 3e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986
|| |||||||| || || | || | || ||||| |||| ||| || |||| ||| |
Sbjct 21638979 ATATTCGTGAAGACCCTGAACGGGAGGACCATCACGCTCGTGGTCGACAGCTGCGACTCG 21638920
Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046
||||||||||||| | ||| || |||| || || |||| ||| ||||||| ||
Sbjct 21638919 GTCGAGAACGTCAAGGCGAGGATCCACGACAGGGAGGGCGTCCCGCCGCACCAGCAGCGG 21638860
Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106
|| ||||||||||| || ||||| || || || | || || ||||| || ||| ||||
Sbjct 21638859 CTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTGGCCGACTACAACATCCAG 21638800
Query 178107 AAAGAATCAACACTGCATCTTGT 178129
|| || || || ||||| || ||
Sbjct 21638799 AAGGAGTCGACGCTGCACCTCGT 21638777
>seq9
Length=22605696
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || |||||||| || |||||||| ||| |||
Sbjct 13619298 CAGATCTTCGTGAAGACGCTGACCGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGAC 13619239
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||||||| |||||||| ||||| |||||||| ||||| ||
Sbjct 13619238 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTAT 13619195
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || |||||||| || |||||||| ||| |||
Sbjct 15390564 CAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGAC 15390623
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| |||||||| ||||| |||||||| |||||
Sbjct 15390624 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGG 15390664
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| ||||||||||||||||| || || |||||||| || || ||||| || ||||| |
Sbjct 15391343 AGGTATCCCTCCGGACCAGCAGCGCCTCATCTTCGCGGGGAAGCAGCTGGAGGATGGCCG 15391402
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || ||||| || ||| |||| || || || || ||||| || ||
Sbjct 15391403 CACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGT 15391450
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || |||||||| || |||||||| ||| |||
Sbjct 15396548 CAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGAC 15396607
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| |||||||| ||||| |||||||| |||||
Sbjct 15396608 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGG 15396648
>seq10
Length=17164355
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| ||||| ||||||||||| || || ||||||||||| || ||||| || || || |
Sbjct 12574774 AGGGATCCCGCCGGACCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGAGGACGGGCG 12574715
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||| || ||||| || ||| |||| || || || || ||||| || ||
Sbjct 12574714 GACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGT 12574667
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || |||||||||||||| || ||| |||
Sbjct 12575024 CAGATCTTCGTGAAGACCCTGACTGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGAC 12574965
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||||||| || ||||| ||||| |||||||| ||||| ||
Sbjct 12574964 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTAT 12574921
>seq7
Length=26479886
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| ||||| ||||||||||| || || ||||||||||| || ||||| || || || |
Sbjct 22381706 AGGGATCCCGCCGGACCAGCAGCGGCTGATCTTCGCCGGGAAGCAGCTGGAGGACGGGCG 22381765
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||| || ||||| || ||| |||| || || || || ||||| || ||
Sbjct 22381766 GACGCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGT 22381813
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || |||||||||||||| || ||| |||
Sbjct 22381438 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGAC 22381497
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| || ||||| ||||| |||||||| |||||
Sbjct 22381498 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGG 22381538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203581783855472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |