Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 4e-13 >seq5 Length=26596109 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| |||| || ||| | | Sbjct 22858255 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAGACCATTACCCTCGAGGTTGAGAGCTCC 22858314 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 22858315 GACACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACCAG 22858374 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || |||||||| || ||||||| | | | | || ||| || ||| Sbjct 22858375 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACAAC 22858434 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || || || || Sbjct 22858435 ATTCAGAAGGAGTCCAC 22858451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935937121860