Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq2 104 2e-17 seq1 104 2e-17 seq5 95.1 1e-14 seq4 93.3 3e-14 >seq6 Length=31808207 Score = 116 bits (128), Expect = 3e-21 Identities = 159/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||||||||||| || ||||||||||| |||| ||| | Sbjct 29029161 AGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGG 29029102 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||||| || ||||| || | || || ||||| |||||| || | ||||| Sbjct 29029101 CCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 29029042 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | ||||| || ||| || | | Sbjct 29029041 TTGTCCTGGATCTTGGC--CTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGCG 29028984 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| ||||||||||| || ||||| || |||||||| Sbjct 29028983 TGATGGTCTTTCCGGTCAGGGTCTTGACGAAGATCTGCAT 29028944 Score = 113 bits (124), Expect = 4e-20 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||||||||||| || ||||||||||| || | ||| | Sbjct 29028933 AGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGG 29028874 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||||| || ||||| || | || || ||||| |||||| || | |||||| Sbjct 29028873 CCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 29028814 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | ||||| || ||| || | | Sbjct 29028813 TTGTCCTGGATCTTGGC--CTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGTG 29028756 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || |||||||| || ||||| || |||||||| Sbjct 29028755 TGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 29028716 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || || | || || ||||||||||| || ||||||||||||||| Sbjct 29028440 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 29028381 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || || ||||| |||||| || Sbjct 29028380 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 29028321 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| || ||| Sbjct 29028320 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTGTCAATGGTGTCCGAGGACTCAA 29028263 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || || || ||||| |||||||| Sbjct 29028262 CCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 29028214 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || |||||||||||||| |||||||| || || | ||| | | ||| Sbjct 29029383 AGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCCGCAAGGGTACGGCCATCC 29029324 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | || || ||||| |||||| || | |||||| ||||| Sbjct 29029323 TCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 29029264 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||||| | ||| || | ||||||||| Sbjct 29029263 TGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTGATGGTC 29029204 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || ||||| || |||||||| Sbjct 29029203 TTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 29029172 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||| || || | ||| | | ||||| | ||| Sbjct 28435002 TGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGC 28435061 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || || || ||||| || | |||||| ||||| ||| | Sbjct 28435062 TTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTG 28435121 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | || || || ||| || | ||||||||| || || || Sbjct 28435122 GCCTTCACATCGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTG 28435181 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || ||||| |||||||| Sbjct 28435182 AGTGTCTTCACAAAGATCTGCAT 28435204 >seq2 Length=37273066 Score = 104 bits (114), Expect = 2e-17 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || ||||||||||| || | ||| || ||||||| | || Sbjct 4568010 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGC 4568069 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| |||| || ||||| ||||| || | |||||| ||||| || || Sbjct 4568070 TTGCCGGCAAAAATGAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTG 4568129 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| | |||| || | |||||| || || |||| Sbjct 4568130 GC--CTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGG 4568187 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| || |||||||| Sbjct 4568188 TCAGAGTCTTGACGAAGATCTGCAT 4568212 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| || | ||||||| || Sbjct 4567782 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGC 4567841 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || || ||||| |||||| || | |||||| ||||| || || Sbjct 4567842 TTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 4567901 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | || || | |||| || | ||||||||| || |||| Sbjct 4567902 GC--CTTGACATTGTCAATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGG 4567959 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || |||||||| Sbjct 4567960 TCAGAGTCTTCACGAAGATCTGCAT 4567984 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || |||||||||||||| ||||||||||||||||||| ||| | ||| Sbjct 4567317 AGCACCAGGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCCAGGGTGCGTCCATCC 4567376 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| || | || || ||||| ||||| || | ||||| ||||| Sbjct 4567377 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 4567436 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | |||||| | ||| |||| ||||||| Sbjct 4567437 TGGATCTTGGC--CTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAGAGTGATGG 4567494 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||| || || || || |||||||| Sbjct 4567495 TCTTCCCAGTCAAAGTCTTCACGAAGATCTGCAT 4567528 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||||| | ||| | | ||| Sbjct 4567545 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 4567604 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| ||| | || || ||||| ||||| || | ||||| ||||| Sbjct 4567605 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCC 4567664 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| |||| |||||||| Sbjct 4567665 TGGATCTTGGC--CTTCACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTGATGG 4567722 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || |||||||| |||||||| Sbjct 4567723 TCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 4567756 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| || ||||||||| || Sbjct 4568238 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGC 4568297 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || |||| || ||||| |||||| || | |||||| || || || || Sbjct 4568298 TTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTA 4568357 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | ||||| | |||| || | |||||| || || |||| Sbjct 4568358 GC--CTTGACATTATCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGG 4568415 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || ||||| |||||||| Sbjct 4568416 TCAATGTCTTCACAAAGATCTGCAT 4568440 >seq1 Length=41795227 Score = 104 bits (114), Expect = 2e-17 Identities = 155/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||||| |||||||| || |||||||||||||||| || ||||| Sbjct 23460690 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCC 23460631 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 |||| || ||||| || | || |||||||| |||||| || | ||||| |||| | Sbjct 23460630 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 23460571 Query 16843 GGCAATTTGCTGCTTCAC---CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGAT 16899 ||| || | ||| || |||| | ||||||| | |||| |||| ||||| Sbjct 23460570 TGCACCTT-CGCCTTGACGTTCTGG---ATCGTGTCGCTGCTCTCCCCCTCCAGCGTGAT 23460515 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || ||||| || || || || |||||||| Sbjct 23460514 GGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 23460479 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||||| | ||| ||||| Sbjct 11039180 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 11039239 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| || | || |||||||| ||||| || | ||||| ||||| Sbjct 11039240 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 11039299 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| || |||| |||| ||||| || Sbjct 11039300 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTC 11039359 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||| || || || || |||||||| ||| Sbjct 11039360 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 11039395 Score = 87.8 bits (96), Expect = 1e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || |||||||||||||||| || | ||||||||| || Sbjct 23465505 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGC 23465446 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || | || |||||||| |||| | || |||||||| ||||| Sbjct 23465445 TTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCG 23465395 >seq5 Length=26596109 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || || | || || |||||||| || || ||||||||||| ||| Sbjct 7958449 CCTCCCCTCAGCCTAAGCACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGCC 7958508 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || ||||| || | ||||| ||||| ||||| || Sbjct 7958509 AAGGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 7958568 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || ||||| |||||| | | | | ||||| || ||| Sbjct 7958569 ATACCCTCCTTATCCTGGATCTTTGC--CTTCACGTTGTCAATCGTGTCTGAGGACTCAA 7958626 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||| ||||| |||| || || ||||| ||||||||| Sbjct 7958627 CCTCCAAAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATT 7958676 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||| | ||| | | ||||| | || Sbjct 3748632 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGC 3748573 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || || ||||| |||||| || | || || ||||| || || Sbjct 3748572 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTG 3748513 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| || |||| |||| |||||||| || || | Sbjct 3748512 GC--CTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCG 3748455 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| || || || || |||||||| ||| Sbjct 3748454 TCAGGGTCTTCACGAAGATCTGCATCTTG 3748426 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || || | || || | |||||||| || || |||||||| |||| ||| Sbjct 7958230 AGCCTGAGCACTAGGTGAAGGATCGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGT 7958289 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || ||||| || | || || ||||| |||||| || | |||||| Sbjct 7958290 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCC 7958349 Query 16838 TTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897 ||||| ||| | | |||||| | | | | || || | ||| || | || Sbjct 7958350 TTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTA 7958409 Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||||||||| || ||||||||||||||||| Sbjct 7958410 ATAGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 7958447 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || | ||| | ||| || | ||| || ||||||||||| || |||||||||||||| Sbjct 22858025 CCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 22857966 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | ||||||| || ||||| || | || || | || ||||| || Sbjct 22857965 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGTCTTTGCTGGTCTGGGGGG 22857906 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | | |||||| | | | | ||||| | ||| Sbjct 22857905 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATCGTGTCTGATGACTCGACC 22857846 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || || || || || || || || |||||||| Sbjct 22857845 TCAAGCGTGATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 22857799 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||||| | ||| | | || Sbjct 22858466 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCT 22858407 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| || | || || ||||| ||||| || | || || ||||| Sbjct 22858406 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCC 22858347 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | |||||| | ||| || | ||| |||| Sbjct 22858346 TGGATCTTAGC--CTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGTAATGG 22858289 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || |||||||| |||||||| Sbjct 22858288 TCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 22858255 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||||| | ||| | | ||| Sbjct 22858238 AGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCC 22858179 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || || || | || || | ||| |||||| || | |||||| || || Sbjct 22858178 TCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 22858119 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| | ||| |||| ||| || || Sbjct 22858118 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTC 22858059 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||| |||||||||||| Sbjct 22858058 TTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 22858026 >seq4 Length=30391017 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | ||||| ||||||||||| || ||||| |||||||| Sbjct 26505296 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCA 26505237 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || || ||||| ||||| ||| Sbjct 26505236 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGG 26505177 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 26505176 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAGGACTCAA 26505119 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || || || || || || || || |||||||| Sbjct 26505118 CCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 26505070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087940755880