Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 140 3e-28 seq6 123 2e-23 seq2 113 4e-20 seq1 107 2e-18 seq4 95.1 1e-14 >seq5 Length=26596109 Score = 140 bits (154), Expect = 3e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| |||| |||||||| || ||||| ||||| ||| | | ||||| ||| || Sbjct 22858236 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCCTC 22858177 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| |||| | || |||||| || || || ||||||||||| ||| Sbjct 22858176 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 22858117 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| ||| ||| | ||||| ||| |||||| | ||||| || || | ||| | || | Sbjct 22858116 GATCTTCGCCTTCACGTTGT-CGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTCT 22858058 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || ||||| || || ||||||||||| Sbjct 22858057 TGCCAGTGAGAGTCTTGACGAAAATCTGCAT 22858027 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 126920 GACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCG 126979 ||||| || || |||||||| || ||| ||||| || || ||||| || || ||| Sbjct 7958254 GACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCG 7958313 Query 126980 TAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGT 127039 |||| | |||||||| || || || ||||||||||||||| || ||| ||| | Sbjct 7958314 AAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACA 7958373 Query 127040 TGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 127099 | |||| || || | | |||||| || | || | || || |||||||| || || Sbjct 7958374 TTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATAGTCTTTCCGGTCAGGGTCTTG 7958433 Query 127100 ACAAAAATCTGCATGGCT 127117 ||||||||||||||| || Sbjct 7958434 ACAAAAATCTGCATGCCT 7958451 Score = 102 bits (112), Expect = 8e-17 Identities = 163/229 (71%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | || ||||| || || || |||||||| | Sbjct 7957994 CCACCGCGGAGACGGAGCACCAGGTGCAAGGTGGACTCGTTCTGGATGTTGTAATCTGCT 7958053 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| |||||| |||||||||| || || Sbjct 7958054 AAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGG-GCTGCTGATCCGGGGGA 7958112 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC--TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| ||| | | ||| || |||| || | ||||| | ||| | Sbjct 7958113 ATGCCCTCCTTGTCC-TGAATCTTTGCTTTTACGTTG-TCAATTGTGTCTGACGACTCAA 7958170 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | |||||||| |||| || || ||||| || ||||| Sbjct 7958171 CCTCCAGGGTAATGGTTTTGCCAGTCAATGTCTTGACAAAGATTTGCAT 7958219 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| || | | |||||| ||| || ||||| || ||| Sbjct 22857539 GTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCA 22857480 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 22857479 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTT 22857420 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| |||| ||| || || | ||| | || ||||| || ||||| Sbjct 22857419 ACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTC 22857360 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 22857359 TTCACAAAGATCTGCAT 22857343 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || |||| || | ||| | || ||||| || || || ||||| ||| | Sbjct 22858026 TCCACCCCTTAGGCGCAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 22857967 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || | ||| || ||||| || |||||| |||| | || ||||| || || || Sbjct 22857966 GAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGTCTTTGCTGGTCTGGGGG 22857907 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 ||||||||||||||| ||| ||| ||| | |||| || | ||||| | ||||| Sbjct 22857906 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCAATCGTGTCTGATGACTCGA 22857848 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | || | || ||||| || || || || || || |||||||| Sbjct 22857847 CCTCAAGCGTGATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 22857799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | | ||| || ||||| || ||| Sbjct 22857767 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 22857708 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || || |||||||||||| ||| || ||| Sbjct 22857707 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 22857648 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| || | | ||| || || | ||| | || ||||| |||| || Sbjct 22857647 ACGTTG-TCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAGGT 22857589 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || ||||| || |||||| || Sbjct 22857588 CTTGACAAAGATTTGCATGCCT 22857567 >seq6 Length=31808207 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || |||||||| || Sbjct 28434522 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCC 28434581 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| ||||||| |||||||| || || || Sbjct 28434582 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 28434641 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| ||| | |||| |||| || | | | ||| || Sbjct 28434642 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATCGTATGAGAAGACTCAAC 28434700 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || ||||||||||| || || ||||||||||||||| || Sbjct 28434701 CTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCATGCCT 28434752 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| ||||| ||| || ||||| || ||| Sbjct 29028410 GTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 29028351 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 29028350 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 29028291 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||||| ||| || || | ||| | || |||||||| || || Sbjct 29028290 ACATTGTCAATGGTGTCCGAGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 29028231 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 29028230 TTCACAAAGATCTGCAT 29028214 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| ||||| |||||||| ||| || ||| || || ||||| || || Sbjct 28434780 GTGGACTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACTGTCCTCAAGCTGCTTGCCG 28434839 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || ||||| || |||||||||||| ||| ||| ||| Sbjct 28434840 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTC 28434899 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||||| |||||| |||| || | || || || |||| || Sbjct 28434900 ACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTC 28434959 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||| ||||||||| || Sbjct 28434960 TTCACAAAGATCTGCATGCCT 28434980 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || ||||| ||||| || |||||||| | Sbjct 29029398 CCACCACGGAGGCGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCCGCA 29029339 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| |||||| |||||||| || || || Sbjct 29029338 AGGGTACGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 29029279 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| ||| ||| | |||| || | ||||| | ||| || Sbjct 29029278 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCAATAGTGTCGGACGACTCAAC 29029220 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| ||||| || || || || |||||||| Sbjct 29029219 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 29029172 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||| || || || ||||| || | | ||||| || || Sbjct 29028925 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTC 29028866 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| |||| | |||||||| || || || ||||||||||||||| Sbjct 29028865 CAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 29028806 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||| | ||||| ||| ||||||| |||||| || | || | || | Sbjct 29028805 GATCTTGGCCTTCACGTTGT-CGATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCT 29028747 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||||| || || || || |||||||| Sbjct 29028746 TGCCGGTCAGGGTCTTGACGAAGATCTGCAT 29028716 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || ||| ||||| || || ||||| || || Sbjct 29029140 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTCCAGCTGCTTGCCG 29029081 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 29029080 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTC 29029021 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | |||||| || | || | || || |||||||| || Sbjct 29029020 ACGTTG-TCGATCGTGTCTGAGGACTCGACCTCAAGCGTGATGGTCTTTCCGGTCAGGGT 29028962 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 29028961 CTTGACGAAGATCTGCAT 29028944 >seq2 Length=37273066 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | ||| ||||| || || || ||||| ||| || Sbjct 4567302 CCACCACGGAGGCGGAGCACCAGGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCC 4567361 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || |||||| |||||| |||||||| || || || Sbjct 4567362 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 4567421 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | || | |||||| | ||||| || Sbjct 4567422 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACC 4567481 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| ||| || || || |||||||| Sbjct 4567482 TCCAGAGTGATGGTCTTCCCAGTCAAAGTCTTCACGAAGATCTGCAT 4567528 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| ||| | Sbjct 4567530 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 4567589 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| |||||| |||||||| || || || Sbjct 4567590 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGA 4567649 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | |||| |||||| | ||||| || Sbjct 4567650 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCTGAGCTCTCAACC 4567709 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || || || || || ||||| |||||||| Sbjct 4567710 TCCAGGGTGATGGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 4567756 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | ||| || ||||| || ||| Sbjct 4567788 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 4567847 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 4567848 GCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 4567907 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| || | | ||| || |||| ||| | || |||||||||||||| Sbjct 4567908 ACATTGTCAATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTC 4567967 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 4567968 TTCACGAAGATCTGCATGCCT 4567988 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | | || | || || ||||| || || Sbjct 4568015 CGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCC 4568074 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 || | || | |||||||| || || || ||||||||||||||| ||| || ||| Sbjct 4568075 GGCAAAAATGAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 4568134 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| |||||| | | ||| || || | ||| | || ||||||||||||| Sbjct 4568135 GACGTTG-TCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGAG 4568193 Query 127095 TTTTTACAAAAATCTGCATG 127114 | || || || ||||||||| Sbjct 4568194 TCTTGACGAAGATCTGCATG 4568213 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || |||||| | || | |||||||| || || || ||||||||||| Sbjct 4568286 TCCTCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTA 4568345 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || ||||| | || | |||||| | | ||| || |||| ||| | Sbjct 4568346 TCTTGGATCTTAGCCTTGACATTATCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATA 4568405 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||||| || || ||||| |||||||| Sbjct 4568406 GTCTTGCCGGTCAATGTCTTCACAAAGATCTGCAT 4568440 >seq1 Length=41795227 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 11039162 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 11039221 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||| | |||||||| ||||| Sbjct 11039222 GCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGC 11039281 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || |||||||||||| ||| ||| ||| | |||| |||| |||||||| ||| Sbjct 11039282 GGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 11039340 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | ||| || || ||||| || || || || |||||||| Sbjct 11039341 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 11039391 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||||| || | ||| ||||| || || || ||||| ||| || Sbjct 23460705 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 23460646 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 23460645 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 23460586 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| | ||| ||||| | | || ||||| | ||||| | Sbjct 23460585 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCCCC 23460526 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || ||||| || || || || |||||||| Sbjct 23460525 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 23460479 >seq4 Length=30391017 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | |||||| ||| || ||||| || || Sbjct 26505038 GTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCG 26504979 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 26504978 GCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTC 26504919 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || || | ||| | ||| ||||| || || || Sbjct 26504918 ACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTGAGGGTC 26504859 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 26504858 TTCACGAAGATCTGCAT 26504842 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || ||| | | ||||| ||| || ||||| || || Sbjct 26505266 GTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 26505207 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||||||| ||| || ||| Sbjct 26505206 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 26505147 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | ||| || || | || | || ||||| || || || Sbjct 26505146 ACGTTG-TCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGT 26505088 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 26505087 CTTCACGAAGATCTGCAT 26505070 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| || ||||| || | | ||||| ||| || ||||| || ||| Sbjct 26504810 GTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCA 26504751 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 26504750 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 26504691 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| || | ||| | || |||||||| || || Sbjct 26504690 ACATTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTC 26504631 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || || |||||| || Sbjct 26504630 TTCACGAATATTTGCATGCCT 26504610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500728674880