Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 7e-13 >seq3 Length=38314702 Score = 89.7 bits (98), Expect = 7e-13 Identities = 136/189 (72%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 201567 CGTATACCAGAAATTGGAGATAAATTTTGTTCT-GGAATGGCCCAAAAAGGAACTTGTGG 201625 ||||||||| | ||||||||||| ||| || | || |||| || ||||||||| || Sbjct 25662979 CGTATACCACAGATTGGAGATAAGTTTAGTAGTAGGCATGG-TCAGAAAGGAACTGTGGG 25663037 Query 201626 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCG--GGTATGACCCCGGATATT 201683 |||| |||| ||||||| || |||||| | || || | || || || || |||||| Sbjct 25663038 AATGACTTATACACAAGAGGACATGCCG--TGGACTATTGAAGGCATCACACCTGATATT 25663095 Query 201684 ATAATCAATCCAAATTGTATACCATCAAGAATGACCATAAATCAAATAATTGCAACTGTT 201743 || | |||||| || ||| ||||| | ||||| || ||| | |||| | || Sbjct 25663096 ATTGTGAATCCACATGCTATTCCATCCCGTATGACTATTGGTCAGCTGATTGAGTGTATT 25663155 Query 201744 ATGGGTAAA 201752 ||||||||| Sbjct 25663156 ATGGGTAAA 25663164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655279901708000