Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 3e-13 >seq5 Length=26596109 Score = 91.5 bits (100), Expect = 3e-13 Identities = 126/170 (74%), Gaps = 10/170 (6%) Strand=Plus/Minus Query 305324 GATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAA 305383 |||| ||||| |||||| ||||||| || || ||||||||||| |||| ||| Sbjct 3122416 GATTTTGTTCTTTTCAATCGGCAACCCAGTCTTCACAAAATGTCTATCATGGGGCATCGC 3122357 Query 305384 GTCAAAGT-ATTATCTGGATTGACATTTC-GATTAAA--TGTAAGTG-CTTGTACGCCTT 305438 | ||| | || || ||| | |||| ||||||| ||| || ||| |||| | Sbjct 3122356 ATTAAAATCATGCCCT--ATTCAACTTTCCGATTAAACTTGTCCGTCACTT---CGCCGT 3122302 Query 305439 ATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488 | ||||| ||||||||||| |||||||||||||||||||| ||||| ||| Sbjct 3122301 ACAATGCAGATTTTGATGGGGATGAAATGAATATGCATGTTCCTCAGTCA 3122252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812617527532