Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq6 134 1e-26 seq2 132 4e-26 seq5 129 5e-25 seq4 113 4e-20 seq9 86.0 6e-12 seq7 82.4 7e-11 >seq1 Length=41795227 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| ||| |||| ||||||||||| || || || Sbjct 11039200 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 11039259 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | || | | |||||||||| |||||| ||||| || Sbjct 11039260 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 11039318 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| ||||||||| || ||||||| || |||| Sbjct 11039319 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 11039378 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 11039379 CGAAGATCTGCAT 11039391 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || |||||||| ||||||| || ||| |||| || Sbjct 23460688 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 23460629 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || || | |||||||||||||| || | | |||||||||| Sbjct 23460628 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 23460569 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| ||| | | | ||||||||| ||| |||||| |||||| || || Sbjct 23460568 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCCCCTCCAGCGTGATGGTCTT 23460509 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || ||||| || |||||||| Sbjct 23460508 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 23460479 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || || |||| ||||||||||| || || || Sbjct 23465494 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 23465435 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| || || |||| |||| |||| |||| | ||| | | Sbjct 23465434 GATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTT 23465375 Query 35665 TGCCACCGTGTCGCTCGAT-TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | |||| | || | | | || ||| | | |||||| || | || ||| || |||| Sbjct 23465374 CTCGACCGAGGCG-TAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCA 23465316 Query 35724 CAAATATCTGCAT 35736 | ||||||||||| Sbjct 23465315 CGAATATCTGCAT 23465303 >seq6 Length=31808207 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || ||||||||| ||||||||||| || Sbjct 29029398 CCACCACGGAGGCGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCCGCA 29029339 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || ||||||||||| ||||| |||| ||||||||||||| || Sbjct 29029338 AGGGTACGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 29029279 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| |||||| ||||| |||| | | |||||| ||| || || Sbjct 29029278 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCAATAGTGTCGGACGACTCAAC 29029220 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || |||| || || || || |||||||| Sbjct 29029219 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 29029172 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| |||| ||| || ||| || |||||||| || ||||| Sbjct 28434785 CTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACTGTCCTCAAGCTGCTTGCCGGCAAA 28434844 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||||||| |||||| ||||| | | Sbjct 28434845 GATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 28434904 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||| | ||||| || || || ||||| || ||||| Sbjct 28434905 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 28434964 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 28434965 AAAGATCTGCAT 28434976 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| || ||||||||||| ||| Sbjct 28434522 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCC 28434581 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || ||||| ||||||||||||| ||| Sbjct 28434582 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 28434641 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| |||||| ||||| |||| | | ||| | || || || Sbjct 28434642 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTATGAGAAGACTCAAC 28434700 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||| || || || || |||| || || ||||| |||||||| Sbjct 28434701 CTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 28434748 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||||||| || |||| ||||||||||| || || || Sbjct 29029135 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 29029076 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | |||||||||| |||||| ||||| || Sbjct 29029075 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 29029017 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | |||||| || || || |||| || || | Sbjct 29029016 TGTCGATCGTGTCTGAGGACTCGACCTCAAGCGTGATGGTCTTTCCGGTCAGGGTCTTGA 29028957 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 29028956 CGAAGATCTGCAT 29028944 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| || |||| ||||||||||| || || || Sbjct 29028907 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAA 29028848 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||||| || Sbjct 29028847 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 29028789 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||||| || || || |||| || || | Sbjct 29028788 TGTCGATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCGGTCAGGGTCTTGA 29028729 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 29028728 CGAAGATCTGCAT 29028716 Score = 109 bits (120), Expect = 5e-19 Identities = 150/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || | || || |||||||| || || || Sbjct 29028405 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 29028346 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||| | | | Sbjct 29028345 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 29028286 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || || | || ||||| Sbjct 29028285 GTCAATGGTGTCCGAGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 29028226 Query 35725 AAATATCTGCATTCTGTGCGCACACACA 35752 ||| ||||||| ||| ||||||||| Sbjct 29028225 AAAGATCTGCA-TCT----GCACACACA 29028203 Score = 89.7 bits (98), Expect = 5e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| ||||| | ||| || |||| ||||||||||| || || || Sbjct 29028678 TCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 29028619 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | ||||||||||||| || | || |||||||||| |||||| Sbjct 29028618 ATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 29028572 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | | ||||| |||||||| | ||| ||| || |||||||||||||| | Sbjct 26573012 TTCCACCCCTGAGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAG 26572953 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || || | || ||||| ||||| || || || |||| || |||||||| | | Sbjct 26572952 CTAATGTACGTCCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGG 26572893 Query 35628 GAACGCTCTCCTTGTCC 35644 ||| | ||| |||||| Sbjct 26572892 GAATACCCTCTTTGTCC 26572876 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || || ||||| || ||||| Sbjct 28435013 CTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAA 28435072 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | |||| || ||||||||| ||||| ||||| | Sbjct 28435073 GATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTCACATC 28435132 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || || ||||| | ||||| || || || || | || ||||| Sbjct 28435133 GTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 28435192 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 28435193 AAAGATCTGCA-TCTGT 28435208 >seq2 Length=37273066 Score = 132 bits (146), Expect = 4e-26 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || |||||||| |||||| Sbjct 4567302 CCACCACGGAGGCGGAGCACCAGGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCC 4567361 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||||||||| || || || |||| ||||||||||| | ||| Sbjct 4567362 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 4567421 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | |||||||||| |||||| ||||| | | | | ||||| |||| || Sbjct 4567422 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC---TCA 4567478 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || |||||||| ||||| || |||||||| Sbjct 4567479 ACCTCCAGAGTGATGGTCTTCCCAGTCAAAGTCTTCACGAAGATCTGCAT 4567528 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || |||||||| ||||| Sbjct 4567530 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 4567589 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || ||||| |||| ||||||||||| | ||| Sbjct 4567590 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGA 4567649 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | |||||||||| |||||| ||||| | | | | ||||| |||| || Sbjct 4567650 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCTGAGCTC---TCA 4567706 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || || | || || ||||| |||||||| Sbjct 4567707 ACCTCCAGGGTGATGGTCTTCCCTGTGAGGGTCTTGACAAAGATCTGCAT 4567756 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || ||||| Sbjct 4567793 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 4567852 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| || |||||||||| |||||| ||| | | | Sbjct 4567853 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 4567912 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || |||||||| | ||||| || || || |||| ||| ||||| Sbjct 4567913 GTCAATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTCAC 4567972 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 4567973 GAAGATCTGCAT 4567984 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | |||| || |||||||| || ||||| Sbjct 4568021 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAA 4568080 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||| | || Sbjct 4568081 AATGAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 4568139 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||| | ||||| || || || |||| ||| || | Sbjct 4568140 TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGA 4568199 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 4568200 CGAAGATCTGCAT 4568212 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | |||| ||||||||||| || || || Sbjct 4568249 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCAGCGAA 4568308 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||| || |||||| ||| | | | Sbjct 4568309 AATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATT 4568368 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||| | ||||| || || || ||||| || ||||| Sbjct 4568369 ATCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 4568428 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4568429 AAAGATCTGCAT 4568440 >seq5 Length=26596109 Score = 129 bits (142), Expect = 5e-25 Identities = 147/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||| || |||||||| || | || || |||||||| || || || Sbjct 7958484 CTCTTTCTGAATGTTGTAGTCCGCCAAGGTCCGACCATCCTCAAGCTGCTTGCCAGCGAA 7958543 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||| ||| ||||||| ||||| || Sbjct 7958544 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTTGCCTTCA-CGT 7958602 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||||| ||||| || || || ||||| || |||| Sbjct 7958603 TGTCAATCGTGTCTGAGGACTCAACCTCCAAAGTGATGGTCTTTCCTGTCAAGGTCTTCA 7958662 Query 35724 CAAATATCTGCATTC 35738 |||| |||||||||| Sbjct 7958663 CAAAGATCTGCATTC 7958677 Score = 118 bits (130), Expect = 1e-21 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| |||| ||| |||||| ||||||||||| ||||| | ||| || | || || Sbjct 22858236 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCCTC 22858177 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||||||| || || || | | ||||||||||| || | || |||||| ||| Sbjct 22858176 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 22858117 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCG 35702 |||||| ||||| |||| | | ||||| |||| || ||||||| || || | Sbjct 22858116 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCTGAGCTC---TCAACCTCCAAGGTAATAG 22858061 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || || || | ||| || || || |||||||||| Sbjct 22858060 TCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATTC 22858025 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || | || || |||||||| || || || Sbjct 3748621 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3748562 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||||| || Sbjct 3748561 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3748503 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| |||||| || || ||||||| || |||| Sbjct 3748502 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3748443 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3748442 CGAAGATCTGCAT 3748430 Score = 116 bits (128), Expect = 3e-21 Identities = 156/213 (73%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || || || ||| || || ||||||||||| || ||||| || | || || Sbjct 7958011 CACCAGGTGCAAGGTGGACTCGTTCTGGATGTTGTAATCTGCTAAGGTGCGGCCATCCTC 7958070 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||| || ||||| ||| | ||||||| |||| |||| || |||||||||| | Sbjct 7958071 GAGCTGCTTGCCAGCAAAGATC-AGGGCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-T 7958128 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 || ||||||| |||| | | ||||| ||| || ||||||| || || |||| Sbjct 7958129 GAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTTT 7958188 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || ||||| || || ||||| || ||||||| Sbjct 7958189 TGCCAGTCAATGTCTTGACAAAGATTTGCATTC 7958221 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || || |||||||| || ||||| Sbjct 22857762 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 22857703 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||| ||||| | | || Sbjct 22857702 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATC-TTTGCCTTAACGT 22857644 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || |||||||| | ||||| || || || ||||| || || | Sbjct 22857643 TGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 22857584 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 22857583 CAAAGATTTGCAT 22857571 Score = 105 bits (116), Expect = 6e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||||| | ||| || | || ||||||||||| || || || Sbjct 22858446 CTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAA 22858387 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| | ||||||||| |||||| ||||| | | Sbjct 22858386 GATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACATT 22858327 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||| | || || || || || || | ||| || Sbjct 22858326 GTCGATGGTGTCGGAGCTC---TCAACCTCGAGGGTAATGGTCTTGCCAGTGAGAGTCTT 22858270 Query 35722 CACAAATATCTGCAT 35736 ||||| |||||||| Sbjct 22858269 GACAAAGATCTGCAT 22858255 Score = 104 bits (114), Expect = 2e-17 Identities = 142/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| || | ||| || |||| || || ||||| |||||||| Sbjct 7958712 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCAAGTTGCTTGCCCGCAAA 7958771 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| ||||| ||| | | | Sbjct 7958772 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATT 7958831 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | || || || || || || | || ||||| Sbjct 7958832 GTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCTTGCCAGTGAGTGTCTTCAC 7958891 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 7958892 AAAGATCTGCA-TCTGT 7958907 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || |||| ||| || |||| || |||||||| || || || Sbjct 7958256 CTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAA 7958315 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| ||||| ||||| | | Sbjct 7958316 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATT 7958375 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || || ||||| | ||| || || || || |||| || || || Sbjct 7958376 GTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATAGTCTTTCCGGTCAGGGTCTTGAC 7958435 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 7958436 AAAAATCTGCAT 7958447 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| | | || ||||||||||| || || || Sbjct 22857990 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 22857931 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | | |||||||| | || | || |||||||||| |||||| ||||| || Sbjct 22857930 GATGAGTCTTTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 22857872 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | |||||| || || || || | || |||| Sbjct 22857871 TGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATGGTCTTGCCAGTAAGGGTCTTCA 22857812 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 22857811 CGAAGATCTGCAT 22857799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || || | || ||| | || || |||||||| || || || Sbjct 22857533 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 22857474 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| || | | |||||||||| |||||| ||| | | | Sbjct 22857473 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 22857414 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || || || ||||| | || || || || || || | ||| |||||| Sbjct 22857413 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 22857354 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 22857353 AAGATCTGCAT 22857343 >seq4 Length=30391017 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || |||||||| || || || Sbjct 26505033 CTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAA 26504974 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||| | | Sbjct 26504973 GATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 26504914 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| |||||||| || || || | || ||||| Sbjct 26504913 GTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTGAGGGTCTTCAC 26504854 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 26504853 GAAGATCTGCAT 26504842 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| ||||| || | || ||| | || || ||||||||||| ||||| Sbjct 26504577 CTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTACCAGCAAA 26504518 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||||| ||| | || |||||||||| ||||| ||||| | | Sbjct 26504517 GATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATT 26504458 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| || || || ||||||| ||||| || || || || | || || || Sbjct 26504457 GTCAATCGTATCAGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAAC 26504398 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 26504397 GAATATCTGCAT 26504386 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || || | ||| || | || || |||||||| || ||||| Sbjct 26504804 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 26504745 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | || | | |||||||||| |||||| ||||| | | Sbjct 26504744 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 26504685 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| ||| || ||||||| || || || || || || | || ||||| Sbjct 26504684 TCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 26504625 Query 35726 AATATCTGCAT 35736 ||||| ||||| Sbjct 26504624 AATATTTGCAT 26504614 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || ||||| | ||| || | || || |||||||| || || || Sbjct 26505261 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 26505202 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || |||||||||| |||||| ||||| || Sbjct 26505201 GATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 26505143 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||| || || || || | || |||| Sbjct 26505142 TGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCA 26505083 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 26505082 CGAAGATCTGCAT 26505070 >seq9 Length=18641908 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||||||| || ||| | || ||||||||||| || || || Sbjct 12149896 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 12149837 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||| ||||| || || | ||| | | ||||||||| Sbjct 12149836 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 12149797 >seq7 Length=26849004 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || || |||| ||||||||||| || || || Sbjct 14354855 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGGCCGTCCTCCAGCTGCTTCCCGGCGAA 14354914 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 14354915 GATCAGCCGCTGCTGGTCCG 14354934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793532380960