Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20meridionalis_20[genbank_20GCA_5F000338895.2_202014-02-27] 12 sequences; 335,668,232 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4 167 6e-36 seq5 165 2e-35 seq1 158 3e-33 seq2 152 1e-31 seq6 145 2e-29 seq8 100 7e-16 seq3 98.7 2e-15 seq9 91.5 4e-13 >seq4 Length=30391017 Score = 167 bits (184), Expect = 6e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||| || ||||| || || |||| |||||||| || | || Sbjct 26505063 ACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGT 26505004 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || |||||||| Sbjct 26505003 GCGACCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACC 26504944 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||| ||||| |||| || || || || Sbjct 26504943 CTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAA 26504884 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | || || | ||| | ||||| Sbjct 26504883 GGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 26504842 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||||||||||| || |||||||| ||||||| ||||| || || | || Sbjct 26504834 CGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTG 26504775 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || |||||||||||||| ||||| || || || ||||| || || || || Sbjct 26504774 CGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCC 26504715 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||||||| ||||| ||||| || | || || || | Sbjct 26504714 TCCTTGTCCTGGATCTTGGCCTTCACATTATCGATCGTGTCAGACGACTCGACCTCCAGG 26504655 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | ||| | |||||| Sbjct 26504654 GTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCAT 26504614 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||| | ||||| || || |||| || ||||| || | ||| Sbjct 26504607 ACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGT 26504548 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||| || |||||||| ||||| |||||||| ||||| ||||| || || || || Sbjct 26504547 ACGCCCATCCTCAAGCTGCTTACCAGCAAAGATAAGGCGTTGCTGGTCCGGAGGGATGCC 26504488 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||||||| || || || || |||| || || || || Sbjct 26504487 CTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTATCAGAGGACTCGACCTCCAA 26504428 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 26504427 GGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 26504386 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||||||||| || ||||| || || |||| || || ||||| | || Sbjct 26505291 ACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGT 26505232 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 26505231 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCC 26505172 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| |||||| ||||||||||| |||| || || || | Sbjct 26505171 CTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAG 26505112 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 26505111 AGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 26505070 >seq5 Length=26596109 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || |||||||| |||||||| ||||| || | ||||| || ||||| || | Sbjct 7958458 AGCCTAAGCACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCCGCCAAGGTCCGA 7958517 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| |||||||||||||| || || ||||| || |||||||| ||| Sbjct 7958518 CCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCC 7958577 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || || ||||||||| |||||| || || |||||||||| || || || || ||| Sbjct 7958578 TTATCCTGGATCTTTGCCTTCACGTTGTCAATCGTGTCTGAGGACTCAACCTCCAAAGTG 7958637 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| || ||||| || || | || | |||||| Sbjct 7958638 ATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATT 7958676 Score = 154 bits (170), Expect = 4e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || |||| ||||| ||||| | || | ||||| Sbjct 3748641 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 3748582 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || || || ||||||||||| Sbjct 3748581 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCC 3748522 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||| ||| Sbjct 3748521 TGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 3748462 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| || || | ||| | ||||| || Sbjct 3748461 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3748427 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || || | ||||| ||||| | || | |||||| Sbjct 22858466 AGCACCAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCT 22858407 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || ||||||||||||||||| Sbjct 22858406 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCC 22858347 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| ||| | || || || | || || ||| Sbjct 22858346 TGGATCTTAGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACCTCGAGGGTAATGGTC 22858287 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 22858286 TTGCCAGTGAGAGTCTT 22858270 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||||||||||||||||||||| || |||| ||||| || || | || Sbjct 22857563 CGAAGGCGGAGGACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTG 22857504 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||||||| |||||||| ||||||||||| || || || ||||| || || || || Sbjct 22857503 CGCCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCC 22857444 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| ||| || ||||| || |||| || || || | Sbjct 22857443 TCCTTGTCCTGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAACCTCAAGG 22857384 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || |||||||| || | ||| || Sbjct 22857383 GTTATGGTCTTGCCAGTGAGAGTCTT 22857358 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||||| || || |||| ||||| || || | || || ||||| Sbjct 22857782 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 22857723 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 22857722 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC 22857663 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || || ||||| || || | ||||| || | ||||| ||| Sbjct 22857662 TGGATCTTTGCCTTAACGTTGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTC 22857603 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | || | |||||| Sbjct 22857602 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 22857571 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| ||||| || || ||||| || || |||| ||||| ||||| | || || ||||| Sbjct 22858011 CAGAACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTGCCATC 22857952 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| ||||||||||| |||| ||| ||||| || || || || |||||||| Sbjct 22857951 CTCCAGCTGCTTGCCAGCGAAGATGAGTCTTTGCTGGTCTGGGGGGATGCCCTCCTTGTC 22857892 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| |||||| || || |||||||| | || || || | |||||| || Sbjct 22857891 CTGGATCTTCGCCTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATGGT 22857832 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || | || || | ||| | ||||| Sbjct 22857831 CTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 22857799 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || || | ||||| ||||| | || | ||||| Sbjct 22858238 AGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCC 22858179 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| |||| || ||||| || || || || ||||| || Sbjct 22858178 TCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 22858119 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||||||| | || || || || || || ||| Sbjct 22858118 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAAGGTAATAGTC 22858059 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | ||| || | ||| | |||||| Sbjct 22858058 TTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 22858026 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 225503 GGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTT 225562 ||||||||||||| ||||| ||||| || | |||||||| || | || | || || | Sbjct 7958693 GGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCT 7958752 Query 225563 CTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTT 225622 | || ||||| || || ||||| || || || ||||| || |||||||| |||||||| | Sbjct 7958753 CAAGTTGCTTGCCCGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCT 7958812 Query 225623 GGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCT 225682 | ||||| ||| ||| || || ||||| |||| || || |||| || || |||| Sbjct 7958813 GAATCTTGGCCTTGACATTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCT 7958872 Query 225683 TGCCCGT 225689 |||| || Sbjct 7958873 TGCCAGT 7958879 >seq1 Length=41795227 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| ||||| | || | ||| || Sbjct 11039180 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 11039239 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||||||||| || || |||||||| Sbjct 11039240 TCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 11039299 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| |||| ||||| || | |||||||||| Sbjct 11039300 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTC 11039359 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| || || | ||| | ||||| || Sbjct 11039360 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 11039394 Score = 107 bits (118), Expect = 5e-18 Identities = 108/139 (78%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || |||| ||||||| || | ||||| |||| ||||||||||||| ||||||||| Sbjct 10709805 TATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGC 10709864 Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 || | || | |||||| || |||||||||| |||||| |||| | | |||| || Sbjct 10709865 TTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTACTCCCCAGGCGG 10709924 Query 7844 AATATTT-ACGCGTTAGCT 7861 | | ||| ||||||||||| Sbjct 10709925 AGTGTTTCACGCGTTAGCT 10709943 Score = 102 bits (112), Expect = 2e-16 Identities = 65/71 (92%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 372637 AGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTTGTAAAACGATGTATA 372696 || |||||||||||||||| |||||||||||||||| ||||||| |||| |||||||||| Sbjct 10686341 AGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATA 10686400 Query 372697 GGGTCTGACAC 372707 | ||||||||| Sbjct 10686401 GAGTCTGACAC 10686411 >seq2 Length=37273066 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| ||||| || || || | ||||| ||||||| || | ||||| Sbjct 4567317 AGCACCAGGTGGAGCGTGGACTCCTTCTGTATGTTGTAGTCGGCCAGGGTGCGTCCATCC 4567376 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || ||||| || |||||||| Sbjct 4567377 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCC 4567436 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || |||||||| ||| | || || || | ||||| ||| Sbjct 4567437 TGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTC 4567496 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | ||| | ||||| Sbjct 4567497 TTCCCAGTCAAAGTCTTCACGAAGATCTGCAT 4567528 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || ||||||||||| ||||| || || |||| ||||| || || | || Sbjct 4567763 ACGAAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGT 4567822 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||| || |||||||| ||||| ||||| || || || ||||| || ||||| || Sbjct 4567823 CCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCC 4567882 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| || ||||| || || | ||||| || | Sbjct 4567883 CTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTATCAGAAGACTCCACCTCGAG 4567942 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| |||| ||| || | ||| | ||||| Sbjct 4567943 GGTGATGGTCTTGCCGGTCAGAGTCTTCACGAAGATCTGCAT 4567984 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| ||||| | || | ||||| Sbjct 4567545 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 4567604 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 4567605 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCAGGGGGAATCCCCTCCTTGTCC 4567664 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||||||| | || || || | ||||| ||| Sbjct 4567665 TGGATCTTGGCCTTCACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTGATGGTC 4567724 Query 225682 TTGCCCGT 225689 || || || Sbjct 4567725 TTCCCTGT 4567732 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || || || |||| ||||| || || | || || || || Sbjct 4568001 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCC 4568060 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || || || || ||||| || ||||| || |||||||| Sbjct 4568061 TCAAGCTGCTTGCCGGCAAAAATGAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 4568120 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | ||||| || | ||||| ||| Sbjct 4568121 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATAGTC 4568180 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | ||||| Sbjct 4568181 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 4568212 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || || || || |||| ||||| || || | || || || || Sbjct 4568229 AGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCC 4568288 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| || || || || ||||| || || || || ||||| ||| Sbjct 4568289 TCCAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCT 4568348 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 4568349 TGGATCTTAGCCTTGACATTATCAATGGTGTCAGAAGACTCCACCTCGAGGGTGATAGTC 4568408 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || Sbjct 4568409 TTGCCGGTCAATGTCTT 4568425 >seq6 Length=31808207 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||| || || |||| |||||||| || | || | ||||| Sbjct 28434993 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCC 28435052 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||| ||||| ||||| ||||| || ||||| ||||| || ||||| || ||||||||| Sbjct 28435053 TCTAGTTGCTTGCCAGCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCT 28435112 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| | || || || || |||| || || || | ||||| ||| Sbjct 28435113 TGAATCTTGGCCTTCACATCGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTC 28435172 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 28435173 TTGCCAGT 28435180 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||||||||| ||||| || || |||| ||||| ||||||| || | Sbjct 29028431 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 29028372 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 29028371 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 29028312 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| ||| || |||||||| |||| || || || | ||| Sbjct 29028311 TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCAAGGGTG 29028252 Query 225676 ATCGTCTTGCCCGT 225689 || |||||||| || Sbjct 29028251 ATGGTCTTGCCGGT 29028238 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || || |||||||| ||||| || || |||| ||||| || || | || | Sbjct 29028933 AGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGG 29028874 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| ||||||||||| || || || ||||| || || || || ||| Sbjct 29028873 CCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 29028814 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| |||||| ||||| ||||| |||| || || || | ||| Sbjct 29028813 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCAAGTGTG 29028754 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || |||||||| |||| || || | ||| | ||||| Sbjct 29028753 ATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 29028716 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || ||||||||||| |||||||| || |||| ||||| ||||| | || | Sbjct 29028705 AGCCTGAGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGT 29028646 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || |||||||| || || || ||||| || || || || ||| Sbjct 29028645 CCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 29028586 Query 225616 TTGTCTTGGATCTT 225629 ||||| |||||||| Sbjct 29028585 TTGTCCTGGATCTT 29028572 >seq8 Length=21838022 Score = 100 bits (110), Expect = 7e-16 Identities = 99/127 (78%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| || || ||| ||||||||||||| ||||||||||| | | | Sbjct 19540514 TGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 19540455 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGC 7854 |||||| || |||||||||| | |||||| |||| | | |||| || ||| || |||| Sbjct 19540454 CCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGCGGGATACTTAACGC 19540395 Query 7855 GTTAGCT 7861 ||||||| Sbjct 19540394 GTTAGCT 19540388 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/104 (81%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 6769 GAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAGC 6826 ||||| ||||||||||||| ||||||||| | |||||||| | || ||| | |||||| Sbjct 19539847 GAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAGC 19539905 Query 6827 AGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870 ||||| |||| || |||||||||||||| ||| ||| |||| Sbjct 19539906 AGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATG 19539949 >seq3 Length=38314702 Score = 98.7 bits (108), Expect = 2e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || || ||||| |||||||| ||||| || || |||| ||||| || |||| || Sbjct 7991478 ACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGT 7991537 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || ||||||||||| ||||||||||| || || ||||| ||||| || || Sbjct 7991538 GCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATAAGCCGCTGCTGGTCCGGCGGGATTCC 7991597 Query 225612 TTCC 225615 | || Sbjct 7991598 TGCC 7991601 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| || || |||| ||||| ||||||| || | ||||| Sbjct 9370243 AGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCATCC 9370184 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || ||||| ||||| |||||| Sbjct 9370183 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATACCT 9370133 >seq9 Length=18641908 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || ||||| | ||| ||||| || || || || | ||||| ||||||| || | | Sbjct 12149922 AGCCTGAGGACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGC 12149863 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| |||||||| || ||||| || | || ||||| || || || || |||||| Sbjct 12149862 CCATCTTCCAGCTGCTTGCCGGCGAATATCAAACGCTGTTGATCTGGAGGGATCCCTTCC 12149803 Query 225616 TTGTCTTG 225623 ||||| || Sbjct 12149802 TTGTCCTG 12149795 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || || | ||||| ||||||| || | ||||| Sbjct 13872134 AGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCCAGGGTGCGGCCATCC 13872075 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || ||||| ||||| |||||| Sbjct 13872074 TCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGGGATACCT 13872024 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||||||| || | ||||| Sbjct 15027361 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCC 15027302 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || ||||||||||| |||||||| || || || ||||| || || |||||| Sbjct 15027301 TCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATACCT 15027251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531016648328