Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq8 127 2e-24 seq7 123 2e-23 seq5 122 7e-23 seq9 96.9 3e-15 seq1 91.5 1e-13 seq12 89.7 4e-13 seq6 84.2 2e-11 >seq8 Length=28014461 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||||| ||||||||||| || ||||| || || || Sbjct 24290998 CCACCACGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT 24290939 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || | ||||| ||||| ||||| || | || |||| |||||| ||| ||| Sbjct 24290938 AAGGCGCGGCCATCCTCGAGCTGCTTGCCAGCCAAGATCAGTCGCTGCTGATCCGGGGGA 24290879 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||| || | | | | || || | ||| Sbjct 24290878 ATGCCCTCCTTGTCCTGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACC 24290819 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||||||| |||||||| || || |||||||| ||||||||| Sbjct 24290818 TCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 24290771 Score = 120 bits (132), Expect = 3e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| || | || |||||||| |||||||| ||||| || ||||| || | || Sbjct 22387574 GAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATC 22387515 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||||||||| || || || | || ||||||||||||||| ||| | ||| ||||| || Sbjct 22387514 CTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATC 22387455 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | | ||| || || | ||| |||| |||||| || Sbjct 22387454 CTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGT 22387395 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||||| || | || ||||| || || |||||| Sbjct 22387394 CTTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 22387361 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022 |||||||| || | || |||||||| |||||||| ||||| || ||||| || | || Sbjct 22387802 GAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATC 22387743 Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 |||||||| ||||| || | || || | ||||||||| ||| | ||||||||||| Sbjct 22387742 TTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTC 22387683 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 |||||| ||||| | | ||| ||||| | ||| |||| |||||||| Sbjct 22387682 CTGGATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGT 22387623 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||| || | || ||||| || || ||||| Sbjct 22387622 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 22387590 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || ||||| | ||||| ||||| ||||| Sbjct 22387102 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 22387043 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | |||||||||| ||| | || |||||||| ||||||| || Sbjct 22387042 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 22386983 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||||||| | ||| || | ||| || |||||||| || || || Sbjct 22386982 ACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTC 22386923 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| |||||||| Sbjct 22386922 TTGACAAAGATTTGCAT 22386906 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||||||||||| || ||||| ||||| || Sbjct 3565270 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3565211 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| ||||| || | || || | |||||||||| ||| Sbjct 3565210 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3565151 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | | ||| || || || |||| Sbjct 3565150 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3565091 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| || |||||||| || || | || || || || || ||||| ||| Sbjct 3565090 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 3565040 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || | ||||||||||| | || | || |||||||| || || || ||||| | Sbjct 24290772 TTCCACCCCTGAGCCTGAGCACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAG 24290713 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || ||| | ||||||| ||||| ||||| || | || | | |||||||||| || Sbjct 24290712 CCGGGGCGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGG 24290653 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| ||||| ||||| | | ||| |||||| | ||| Sbjct 24290652 GGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGA 24290593 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||| ||||| | || |||||||| || ||||| Sbjct 24290592 CCTCAAGCGTAATGGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 24290544 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||| || ||||| | | ||||||||||| ||||| Sbjct 22387330 GTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCG 22387271 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| ||||||| | |||||| || ||| | ||| |||||||| |||||| ||| Sbjct 22387270 GCAAAAATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTC 22387211 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| || | |||||||||||||| || | || Sbjct 22387210 ACGTTGTCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTC 22387151 Query 21159 TTGACAAATATTTGCATT 21176 || || || || |||||| Sbjct 22387150 TTCACGAAGATCTGCATT 22387133 >seq7 Length=28646061 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||| | || | ||||||||||| || ||||| ||||| || ||||| || Sbjct 26600953 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGG 26600894 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 ||||||||||||| ||||| ||| | || || | ||||||||| ||| | ||| ||| Sbjct 26600893 CCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCC 26600834 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| || || | | | | || ||| | ||| || | ||| Sbjct 26600833 TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTG 26600774 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||||| || || || ||||| || || ||||| Sbjct 26600773 ATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 26600736 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| ||||| ||||||||||| || ||||||||||| || Sbjct 24916346 CCTCCACGAAGGCGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCA 24916287 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | ||||||||| || Sbjct 24916286 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGA 24916227 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| || ||| || ||| Sbjct 24916226 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACC 24916167 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| || |||||||| || | || || ||||| || ||||| Sbjct 24916166 TCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 24916120 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||| | || | ||||||||||| || ||||| ||||| |||||||| || Sbjct 26600276 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 26600217 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | ||||| ||||| ||||| || | || || | |||||||||| ||| | ||| ||| Sbjct 26600216 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 26600157 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| || || | | | | || || || ||| || | ||| Sbjct 26600156 TTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTG 26600097 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||||||||| | || || ||||| || ||||| Sbjct 26600096 ATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 26600059 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 |||||||| |||| || | ||||||||||| || ||||| ||||| |||| ||| || Sbjct 26601181 AGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGG 26601122 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | ||||||||||| ||||| || | || || | |||||||||| ||| | || ||| Sbjct 26601121 CCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCC 26601062 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 ||||| |||||| ||||| | | ||| || || || ||| || | || Sbjct 26601061 TTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTG 26601002 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||||||||| | || ||||| || || ||||| Sbjct 26601001 ATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 26600964 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | ||||||||||| || ||||| || ||||| Sbjct 26601418 CCACCACGGAGGCGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCA 26601359 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| || || ||| | || || | |||||||||| ||| Sbjct 26601358 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 26601299 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | | | | ||| || | ||| Sbjct 26601298 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCAACC 26601239 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||| || | || || || || || ||||| Sbjct 26601238 TCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 26601192 Score = 109 bits (120), Expect = 5e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||||| ||||||||||| || |||||||| ||||| Sbjct 24915890 CCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCG 24915831 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| ||||| || | ||||| | ||||||||| || Sbjct 24915830 AGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCCGGAGGG 24915771 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| ||||| | | | | ||||| || ||| Sbjct 24915770 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACC 24915711 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 |||| ||| ||||||||||| || | || || || ||||| ||||| | ||| Sbjct 24915710 TCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCATCTGGAA 24915658 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||||| |||||||| ||||| ||||| || ||||| || | ||||| ||||| Sbjct 24916094 TGCAGGGTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGC 24916035 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 || || ||| | || || | ||||||||| || | || |||||||| |||||| Sbjct 24916034 TTCCCAGCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTG 24915975 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | ||| || || || ||| |||| ||||||||||||||| || Sbjct 24915974 GCCTTCACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCAGTG 24915915 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || || ||||||||||| Sbjct 24915914 AGGGTCTTCACGAATATTTGCAT 24915892 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||||||||||| || ||||||||||| || ||||| || | ||||| ||||| Sbjct 24916778 TGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGC 24916719 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| || | || || | ||||||||| || | ||| ||||| || |||||| Sbjct 24916718 TTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTG 24916659 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | | ||| || ||| || ||| |||| || ||||||||||| || Sbjct 24916658 GCCTTCACGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTG 24916599 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || || || || ||||| Sbjct 24916598 AGGGTCTTCACGAAGATCTGCAT 24916576 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||||||||| | || | ||||||||||| || ||||| ||||| ||||| || || Sbjct 26600725 AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGTGTGCGG 26600666 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | ||||| ||||| ||||| || | || || | |||||||||| ||| | ||| ||| Sbjct 26600665 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCC 26600606 Query 21078 TTGTCGGCGATCTT 21091 || || |||||| Sbjct 26600605 TTATCTTGGATCTT 26600592 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| ||||||||||| || ||||| || || || ||||| | | ||||| ||||| Sbjct 24916550 TGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGC 24916491 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| || | || || | ||||||||| || | || |||||||| |||||| Sbjct 24916490 TTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTG 24916431 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | | ||| || ||| | ||| |||| ||| |||||||||||||| Sbjct 24916430 GCCTTCACATTGTCGATCGTGTCAGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTG 24916371 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || || || || || ||||| Sbjct 24916370 AGGGTCTTCACGAAGATCTGCAT 24916348 >seq5 Length=35065507 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||||| ||||||||||| || ||||| || || ||| Sbjct 30648406 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCC 30648465 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||| ||||| ||||| || | || | | |||||||||| ||| Sbjct 30648466 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 30648525 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| |||| | | ||| Sbjct 30648526 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTATGAGAAGACTCAACC 30648585 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||||| | || |||||||| || ||||| Sbjct 30648586 TCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 30648632 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| || | || |||||||| || ||||| ||||| || ||||| || | ||| Sbjct 3012136 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 3012195 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| || | || || | ||||||||| ||| | ||| |||||||| Sbjct 3012196 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 3012255 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| || || | ||| |||| ||| |||||| Sbjct 3012256 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCAACCTCCAGGGTGATGGTC 3012315 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || |||||||| || ||||| Sbjct 3012316 TTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3012347 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || ||||| | | ||||||||||| ||||| Sbjct 3013089 GTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 3013148 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| ||| | ||| ||||| || |||||| || Sbjct 3013149 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTG 3013208 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| || ||| || |||| || | ||| || ||||||||||| || || Sbjct 3013209 ACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTC 3013268 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 3013269 TTCACAAAGATCTGCAT 3013285 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | || | ||||||||||| || ||||| ||||| || Sbjct 3012349 CCACCACGAAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 3012408 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| ||||| ||| | || || | |||||| ||| ||| Sbjct 3012409 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGGGGA 3012468 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | ||| |||||||| |||||| Sbjct 3012469 ATGCCCTCCTTGTCCTGGATCTT 3012491 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | ||||||||||| || ||||| ||||| || Sbjct 3011893 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3011952 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| ||||| || | || || | ||||||||| ||| Sbjct 3011953 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 3012012 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | | || || | ||| Sbjct 3012013 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACC 3012072 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || || || || || || || ||||| Sbjct 3012073 TCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3012119 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| || ||||| ||||| || | ||||| || || ||||| Sbjct 30648892 GTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCA 30648951 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | |||||||| || | ||| |||||||| ||||| ||| Sbjct 30648952 GCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTC 30649011 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | |||||| || ||| || | ||| ||||||||||| || | || Sbjct 30649012 ACATCATCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTC 30649071 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| || ||||| Sbjct 30649072 TTCACAAAGATCTGCAT 30649088 >seq9 Length=29411429 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | || |||||||| || ||||| ||||| || Sbjct 7709399 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 7709340 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| ||||| || | || || | ||||||||| || Sbjct 7709339 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 7709280 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||||| | | ||| || || || |||| Sbjct 7709279 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 7709220 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| || || ||||| || || | || || || || || ||||| ||| Sbjct 7709219 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 7709169 >seq1 Length=42845077 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 || || | |||||| | |||| || |||||||| || ||||| ||||| ||||| || Sbjct 24058314 CGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTG 24058255 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCT 21074 || ||||||||||||| ||||| || | || || | |||||||| | || ||||| Sbjct 24058254 CGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCC 24058195 Query 21075 TCCTTGTCGGCGATC 21089 ||| ||||| |||| Sbjct 24058194 TCCCTGTCGTGGATC 24058180 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| || |||||||| || ||||| ||||| ||| Sbjct 24053834 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 24053775 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||| ||||| || | || || | |||||||||| || Sbjct 24053774 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 24053715 Query 21069 ACGCCTTCCTTGTC 21082 | || |||||||| Sbjct 24053714 ATCCCCTCCTTGTC 24053701 >seq12 Length=20407407 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| |||| || |||||||| || ||||| ||||| ||| Sbjct 15910951 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 15910892 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 ||||| || | ||||||||||| || ||||| | || || | |||||||||| Sbjct 15910891 AGGGTGCGGCCATCCTCCAGCTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCC 15910838 >seq6 Length=36134596 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | || | ||||||||||| || ||||| ||||| ||| Sbjct 7350230 CCGCCACGGAGCCTGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 7350289 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCC 21062 ||||| | ||||||||||||| || || || | || || | |||||||||| Sbjct 7350290 AGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCC 7350343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259138244592