Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq9 140 8e-28 seq8 140 8e-28 seq7 127 5e-24 seq5 125 2e-23 seq1 118 3e-21 seq11 109 1e-18 seq12 89.7 1e-12 seq6 84.2 5e-11 >seq9 Length=29411429 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | || || || ||||| || ||||||||| Sbjct 7709399 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCG 7709340 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 7709339 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGG 7709280 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| |||||||| || || | || || || || Sbjct 7709279 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 7709220 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 7709219 TCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 7709173 Score = 102 bits (112), Expect = 2e-16 Identities = 128/173 (74%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| | ||| ||||||| || || ||||| ||||| || || || || ||| Sbjct 8530599 TCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCA 8530540 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| ||||| | |||| ||||||| ||| || ||||||| || ||||| || Sbjct 8530539 TGGCGCTCGGCTGCAAGAAGATGTACAACGTCGCC-AACCCCTTCGACTGGATGGAGCTC 8530481 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || || || | || ||||| ||||||||||| ||||| ||| ||||||| || Sbjct 8530480 ATATCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCA 8530428 Score = 93.3 bits (102), Expect = 1e-13 Identities = 126/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| | ||| ||||||| || || ||||| ||||| || || || | ||| Sbjct 1286974 TCGGGATGAACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCA 1287033 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| ||||| | |||| ||||||| ||| || || |||| || ||||| || Sbjct 1287034 TGGCGCTCGGGTGCAAGAAGATGTACAACGTCGCC-AACCCGTTCGACTGGATGGAGCTC 1287092 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || || || | || ||||| ||||||||||| ||||| ||| ||||||| || Sbjct 1287093 ATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCA 1287145 >seq8 Length=28014461 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 3565270 CCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3565211 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || |||||||| || ||||| || ||| Sbjct 3565210 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 3565151 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || |||||||| || || | || || || || Sbjct 3565150 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3565091 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 3565090 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 3565044 Score = 118 bits (130), Expect = 3e-21 Identities = 146/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||||||| || || || ||||| | || || || |||||| Sbjct 22387780 TCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAG 22387721 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| ||||| || |||||| || ||||| || |||||||| || || ||||| Sbjct 22387720 ATCAGGCGCTGCTGG---TCTGGGGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACA 22387664 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | |||| ||| || || || || || || ||||| || || |||||| Sbjct 22387663 TTGTCGATGGTATCGGAGCTC---TCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTC 22387607 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 22387606 TTGACGAAGATCTGCAT 22387590 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || |||||||| || ||||| || || || | || || || |||||| Sbjct 22387552 TCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAG 22387493 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| || || ||||||||||| ||||| ||||| || Sbjct 22387492 ATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTG 22387433 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || || || || ||||| || || ||||||||| Sbjct 22387432 TCGATGGTGTCTGAGCTC---TCAACCTCCAGGGTAATAGTCTTGCCAGTGAGAGTCTTG 22387376 Query 288460 ACGAATATCTGCATT 288474 ||||| ||||||||| Sbjct 22387375 ACGAAAATCTGCATT 22387361 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || || |||| ||| || || ||||| || ||||| || || || | || || Sbjct 22387117 AGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCC 22387058 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || || || || |||||||||||||| || || ||| || || || || Sbjct 22387057 TCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTG---GTCCGGGGGAATCCCCTCCTTG 22387001 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || || || ||||| || |||| ||| || || || || || ||||| Sbjct 22387000 TCCTGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATA 22386941 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || |||| |||||||| || || ||||| Sbjct 22386940 GTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 22386906 >seq7 Length=28646061 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || || || | ||| || || ||||| || || || Sbjct 26601421 TGGCCACCACGGAGGCGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCC 26601362 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || ||||| || || || | || || || || |||||||||||||| || Sbjct 26601361 GCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGG 26601302 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| ||||| |||||||| || |||| ||| ||| || Sbjct 26601301 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATAGTGTCGGACGACTCA 26601242 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 26601241 ACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 26601192 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| || || || || |||| ||| || || ||||| || ||||| || Sbjct 26601190 CCACCCCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCC 26601131 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || || || |||||||| |||||||| || ||| Sbjct 26601130 AAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 26601071 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || ||||| || || || | || || || || Sbjct 26601070 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCGACC 26601011 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 26601010 TCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 26600964 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| ||||||||||| Sbjct 24916802 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCA 24916743 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || ||||| || || || | || || || |||||||| || ||||| || ||||| Sbjct 24916742 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG---TCTGGA 24916686 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| || || ||||||||||| || || |||||||| || || | || || || Sbjct 24916685 GGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGGACTCA 24916626 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || ||||| ||||| |||||||| Sbjct 24916625 ACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 24916576 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| || || || || || | ||| || || ||||| || |||||||| Sbjct 26600962 CCACCCCTGAGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCA 26600903 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| |||||||| || |||||| Sbjct 26600902 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGG---TCTGGG 26600846 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || || || || || || || | || ||| || Sbjct 26600845 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGACGACTCG 26600786 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || |||| ||||||||||| |||||||| Sbjct 26600785 ACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 26600736 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| || || ||||| ||||| || | || || || |||||| Sbjct 24916310 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 24916251 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||| || || || || |||||||| || || ||||| || Sbjct 24916250 ATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTG 24916191 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || | ||||||||||| || || || ||||| || Sbjct 24916190 TCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCACA 24916131 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 24916130 AAGATCTGCAT 24916120 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| ||||| || ||||| || || || || || | || || || |||||| Sbjct 24915854 TCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAG 24915795 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || || || || ||||| || || || ||||| || || || ||||| || Sbjct 24915794 ATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTG 24915735 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| || || || || | ||||| ||||| || || || ||||| ||| Sbjct 24915734 TCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACG 24915675 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 24915674 AATATCTGCAT 24915664 >seq5 Length=35065507 Score = 125 bits (138), Expect = 2e-23 Identities = 171/236 (72%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 3011890 TGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 3011949 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||||| |||||||| || || | || || || ||||||||||||||||| || ||| Sbjct 3011950 GCGAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTG---GTCT 3012006 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTC 288417 ||| || || || || |||||||| || || ||||| || || || | || |||| Sbjct 3012007 GGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC 3012066 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| |||| ||||| ||||| |||||||| Sbjct 3012067 ---TCAACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3012119 Score = 116 bits (128), Expect = 9e-21 Identities = 167/233 (72%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | || || || ||||| || ||||||||| Sbjct 3012121 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 3012180 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || || || | || || || |||||||| |||||||| || ||| Sbjct 3012181 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTG---GTCTGGG 3012237 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| || || || |||||||| || || || ||||| || || | || |||| Sbjct 3012238 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTC--- 3012294 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || || |||||||| || |||||||| Sbjct 3012295 TCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3012347 >seq1 Length=42845077 Score = 118 bits (130), Expect = 3e-21 Identities = 173/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 288233 TGAT-TCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGG 288291 |||| || | |||| || | |||||| | || ||||| || | ||| || || ||| Sbjct 24058334 TGATGTCGTTCATG-CCGCGGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGG 24058276 Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351 || || |||||||| |||||||| ||||| || | || || || |||||||| || ||| Sbjct 24058275 ATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGC 24058216 Query 288352 TGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAA 288411 || || |||| || || | || ||||| |||| || ||||| || | || Sbjct 24058215 TGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAG 24058156 Query 288412 TCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGC 288471 |||| || || |||||||||| ||| ||||| |||| ||||| |||||||||||| Sbjct 24058155 TCGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCACGAATATCTGC 24058096 Query 288472 AT 288473 || Sbjct 24058095 AT 24058094 >seq11 Length=26703665 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | || || || || || || ||||| || Sbjct 4117586 CCACCACGGAGACGGAGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCA 4117645 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||||||| || || | || || || |||||||| || ||||| || || ||| Sbjct 4117646 AGGGTGCGTCCTTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGG---TCCGGG 4117702 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||||||||| ||||| ||||| || || || | ||| || || Sbjct 4117703 GGAATACCCTCCTTATCCTGGATCTTCGCCTTCACATTGTCGATTGTGTCGGATGACTCC 4117762 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| | ||| |||||||| || || || || |||||||| Sbjct 4117763 ACCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 4117812 >seq12 Length=20407407 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | ||||| || || Sbjct 15914769 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACC 15914710 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 15914709 TCCAGCGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCAT 15914663 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | ||||| || || Sbjct 14620373 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACC 14620314 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||||||||| || | ||| ||||| |||||||| Sbjct 14620313 TCCAGCGTGATCGTCTTCCCGGTGAGCGGCTTCACGAAGATCTGCAT 14620267 >seq6 Length=36134596 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || || || || || || || | ||||| || || ||| Sbjct 322880 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACCTCG 322939 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 322940 AGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 322983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654218628136