Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq8 120 3e-22 seq7 120 3e-22 seq1 118 1e-21 seq9 113 5e-20 seq5 113 5e-20 seq11 104 3e-17 >seq8 Length=28014461 Score = 120 bits (132), Expect = 3e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||| ||||| ||| |||||| || || |||||||| || | | || | Sbjct 24290987 ACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGCGCGGCC 24290928 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| ||||| || || ||||||||||| || | || | || |||||| Sbjct 24290927 ATCCTCGAGCTGCTTGCCAGCCAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTT 24290868 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCGCTCGATTCCACATCGACCGTGA 42171 |||| ||| | |||| || ||| | || ||||| ||| || || || | || | Sbjct 24290867 GTCC-TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAA 24290809 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||||||||| || | ||||| ||||||||||||||| Sbjct 24290808 TGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 24290771 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| ||||| || || ||| | || || |||||||| |||||||| Sbjct 22386868 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 22386809 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | ||| | | |||||||||| ||| || || | | Sbjct 22386808 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 22386749 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || || || || || || | || ||||| ||||| || || ||||| ||| Sbjct 22386748 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTAAGAGTCTTCACA 22386689 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 22386688 AAGATCTGCAT 22386678 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| || ||||| Sbjct 3565235 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3565176 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | ||||||||| ||| || || | ||| Sbjct 3565175 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3565117 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| || | ||||||||| || ||||| || ||||| | Sbjct 3565116 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3565057 Query 42196 CAAAGATTTGCATTTT 42211 | ||||| ||||| || Sbjct 3565056 CGAAGATCTGCATCTT 3565041 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || |||| | || || |||||||| ||||| || Sbjct 22387097 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 22387038 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| || | |||| | | ||| Sbjct 22387037 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC-TGGATCTTTGCCTTAACGT 22386979 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || || || || || || | ||||| || ||||| || | ||||| | Sbjct 22386978 TGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 22386919 Query 42196 CAAAGATTTGCAT 42208 ||||||||||||| Sbjct 22386918 CAAAGATTTGCAT 22386906 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || | || | |||||| || | || |||||| ||||| ||||| || || Sbjct 22387589 ACCACCCCTGAGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGC 22387530 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || ||||||||||||||||| ||||||| ||||||||| | || Sbjct 22387529 AAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGG 22387470 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | || |||||| ||| ||| || || | | | | ||||| |||| || Sbjct 22387469 GATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAGCTC---TC 22387413 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || || | || || || ||||| || || ||||| || || || |||||| Sbjct 22387412 AACCTCCAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 22387361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || |||| |||||||| || || || || |||| || || ||||| || || || Sbjct 24290094 CTCTTTCCGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCAAGTTGCTTGCCCGCAAA 24290035 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | ||| | | |||||||||| ||| | || | |||| | Sbjct 24290034 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCC-TGAATCTTGGCCTTGA-CA 24289977 Query 42136 TCGCCA-CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | ||||| || || || || | || ||||| ||||| || || ||||| Sbjct 24289976 TTGTGAGTTGTGTCAGAGGACTCAACCTCTAGGGTTATGGTATTGCCAGTGAGTGTCTTC 24289917 Query 42195 ACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 24289916 ACAAAGATCTGCAT 24289903 >seq7 Length=28646061 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| ||||| ||| |||||| || || || || ||||| || || || |||| || Sbjct 24916328 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 24916269 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| ||||| ||||||||||| | ||| | | |||||||||| | Sbjct 24916268 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGG 24916209 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || || | | | | |||||| || || || || | ||||| || ||| Sbjct 24916208 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 24916149 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| |||||||| ||||| Sbjct 24916148 CCAGTAAGGGTCTTCACAAAGATCTGCAT 24916120 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || ||||| || || | || || |||||||| |||||||| Sbjct 26600250 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 26600191 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 26600190 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 26600131 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 26600130 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 26600071 Query 42197 AAAGATTTGCATTTTCAC 42214 |||||| ||||| | ||| Sbjct 26600070 AAAGATCTGCATCTGCAC 26600053 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| ||| |||||| || || |||||||| || || || || | || || |||||| Sbjct 24916550 TGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGC 24916491 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 || |||||||| ||||| ||||||||||| | ||| | | |||||||||| ||| || Sbjct 24916490 TTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTG 24916431 Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185 || | | | | |||||| ||| || || || | |||||||| ||||| || Sbjct 24916430 GCCTTCACATTGTCGATCGTGTCAGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTG 24916371 Query 42186 AGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || ||||| ||||| Sbjct 24916370 AGGGTCTTCACGAAGATCTGCAT 24916348 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| || | |||| |||||| || || |||||||| || || || || | || || Sbjct 26601401 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 26601342 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||||||||| || || || ||||||||||| | || | || |||||||||| Sbjct 26601341 AAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 26601282 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 ||| || || | ||| | | | |||||| ||| || || || | || ||||| | Sbjct 26601281 GATCTTCGCCTTCA-CGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCT 26601223 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || ||||| || ||||| ||||| Sbjct 26601222 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 26601192 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || |||||||| ||||| || Sbjct 26600927 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAA 26600868 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 26600867 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 26600808 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| ||| || || || | |||||||| ||||| || | ||||| || Sbjct 26600807 GTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGAC 26600748 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 26600747 GAAGATCTGCAT 26600736 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||||| || || | || || |||||||| || ||||| Sbjct 26601155 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 26601096 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 26601095 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 26601036 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || || || || | ||||||||| ||||| || || ||||| || Sbjct 26601035 GTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGAC 26600976 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 26600975 GAAGATCTGCAT 26600964 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||| || || || || || | || || |||||||| ||||| || Sbjct 24916082 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAG 24916023 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | ||| | | |||||||||| ||| || || | | Sbjct 24916022 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 24915963 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||| || || || || | || ||||| ||||| || || ||||| || Sbjct 24915962 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACG 24915903 Query 42198 AAGATTTGCAT 42208 || |||||||| Sbjct 24915902 AATATTTGCAT 24915892 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| ||| |||||| || || || || || || || || || | || || |||||| Sbjct 24916778 TGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGC 24916719 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 || || ||||| ||||| ||||||||||| | || | || |||||| ||| ||| || Sbjct 24916718 TTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTG 24916659 Query 42126 TGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 || | ||| | | | ||||| || || || || | |||||||| ||||| || Sbjct 24916658 GCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGT 24916600 Query 42185 TAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || ||||| ||||| Sbjct 24916599 GAGGGTCTTCACGAAGATCTGCAT 24916576 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||||||| || || | || || |||||||| |||||||| Sbjct 26600699 CTCCTTCTGGATGTTGTAGTCAGCCAGTGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 26600640 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 ||||| ||||||||||| | || | || |||||| || Sbjct 26600639 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATC 26600601 >seq1 Length=42845077 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| |||| || |||||| || || ||||| || ||||| || ||| |||| || Sbjct 24053817 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 24053758 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| ||||| ||||||||||| | || | | |||||||||| Sbjct 24053757 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 24053698 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | || |||| || | ||||||||| ||||| || | ||||||||| || Sbjct 24053697 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 24053638 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || ||||| || ||||| ||||| Sbjct 24053637 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 24053608 >seq9 Length=29411429 Score = 113 bits (124), Expect = 5e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || ||| |||| || |||||||| || ||||| Sbjct 7709364 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 7709305 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | | |||||||||| ||| || || | ||| Sbjct 7709304 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 7709246 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| || | |||||| || || ||||| || ||||| | Sbjct 7709245 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 7709186 Query 42196 CAAAGATTTGCATTTT 42211 | ||||| ||||| || Sbjct 7709185 CGAAGATCTGCATCTT 7709170 >seq5 Length=35065507 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || ||||| |||||||||||||| ||||| ||| || |||||||| || || || Sbjct 30648669 CTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACTGTCCTCAAGCTGCTTGCCGGCAAA 30648728 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 30648729 GATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 30648788 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||| || || |||| |||||||| || || || | ||||| || Sbjct 30648789 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 30648848 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 30648849 AAAGATCTGCAT 30648860 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || |||||||| || ||||| Sbjct 3012156 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3012215 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 3012216 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 3012274 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | |||||||| ||||| || || |||| Sbjct 3012275 TGTCGATGGTGTCCGAGCTC---TCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCT 3012331 Query 42193 TTACAAAGATTTGCAT 42208 | |||||||| ||||| Sbjct 3012332 TGACAAAGATCTGCAT 3012347 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || |||| | || || |||||||| |||||||| Sbjct 3013094 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3013153 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||| || ||| || |||| | Sbjct 3013154 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATT 3013213 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || ||||| |||| ||||| || ||||| || | ||||| || Sbjct 3013214 ATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 3013273 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 3013274 AAAGATCTGCAT 3013285 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||| ||||| ||| |||||| || || |||||||| ||||| || || | || || Sbjct 30648423 CACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCCAGGGTGCGTCCATCCTC 30648482 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 |||||||| || ||||| || | ||||||||||| | || | | |||||||||| Sbjct 30648483 AAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 30648542 Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177 ||| || || | ||| | | | ||| | || || || || | ||| ||||| | Sbjct 30648543 GATCTTCGCCTTCA-CGTTGTCGATCGTATGAGAAGACTCAACCTCAAGCGTAATGGTCT 30648601 Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || ||||| ||||| || ||||| Sbjct 30648602 TGCCGGTCAGGGTCTTGACAAAAATCTGCAT 30648632 >seq11 Length=26703665 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| ||||| || || || | || || |||||||| |||||||| Sbjct 4117621 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCAGCGAA 4117680 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||| ||| ||| || || | | Sbjct 4117681 GATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGCCTTCACATT 4117740 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || ||||| || | ||||||| ||||| || || || || || Sbjct 4117741 GTCGATTGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCAC 4117800 Query 42197 AAAGATTTGCAT 42208 |||||| ||||| Sbjct 4117801 AAAGATCTGCAT 4117812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212718518080