Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 seq9 150 2e-31 seq5 138 1e-27 seq8 136 4e-27 seq7 123 3e-23 seq11 122 1e-22 seq12 89.7 6e-13 seq6 82.4 9e-11 >seq1 Length=42845077 Score = 154 bits (170), Expect = 2e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| || |||||| |||| || Sbjct 24053817 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 24053758 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | ||||||||||| | ||| | | |||||||||| Sbjct 24053757 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 24053698 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 | |||| ||||| || | ||||||||| ||||| |||| ||||||||| || Sbjct 24053697 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 24053638 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| || || || ||||| ||||| Sbjct 24053637 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 24053608 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || |||| || |||||| ||||| |||||||||| || ||||| |||| || Sbjct 24058303 CACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTC 24058244 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | |||||||||| | ||| |||| |||| |||| Sbjct 24058243 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTG 24058184 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||| || ||||| || | |||| ||||| || || | | ||||||||| | Sbjct 24058183 GATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCT 24058124 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || |||| || || || || || ||||| || Sbjct 24058123 CCCGTTCAGGGTCTTCACGAATATCTGCATCTT 24058091 >seq9 Length=29411429 Score = 150 bits (166), Expect = 2e-31 Identities = 164/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || |||||| |||| || Sbjct 7709382 CACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 7709323 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| || | ||||||||||||| ||| | | |||||||||| Sbjct 7709322 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTG 7709263 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | ||||| || ||||| |||| |||||| || | Sbjct 7709262 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 7709204 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 | |||||||| || || || ||||| ||||| ||| Sbjct 7709203 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 7709169 >seq5 Length=35065507 Score = 138 bits (152), Expect = 1e-27 Identities = 165/220 (75%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| || | ||| |||||| ||||| |||||||||| || ||||| | Sbjct 3012132 ACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCC 3012191 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||||||||| || | ||||||||||| | || | || |||||| Sbjct 3012192 ATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 3012251 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553 |||| |||||| ||||| ||| | | | ||||| |||| || || |||| | Sbjct 3012252 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGCTC---TCAACCTCCAGGG 3012307 Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| ||||| || || || || |||||||| ||||| Sbjct 3012308 TGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3012347 Score = 131 bits (144), Expect = 2e-25 Identities = 171/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 |||| ||| || | | || | |||||| ||||| || |||||| ||||| ||||| Sbjct 30648400 TATTGGCCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAA 30648459 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 || | || ||||| | || || ||||||||||||||||| ||||||||||||||||| Sbjct 30648460 TCTGCCAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCC 30648519 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539 | || | | |||||||||| ||||||| ||| | ||| | | | ||| | || Sbjct 30648520 GGGGGAATTCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTATGAGAAGA 30648578 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | ||| ||||| ||||| ||||| || || ||||| || ||||| Sbjct 30648579 CTCAACCTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 30648632 Score = 105 bits (116), Expect = 8e-18 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | || |||||| ||||| |||||||||| || ||||| | || || Sbjct 3011910 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTC 3011969 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| |||| ||||||||||| | || | | |||||||||| Sbjct 3011970 CAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTG 3012029 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | | | | ||||| |||| || || |||| |||||||| Sbjct 3012030 GATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC---TCAACCTCCAAAGTGATGGT 3012086 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || ||||| ||||| Sbjct 3012087 CTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3012119 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || || ||||||||||| ||||| Sbjct 3013094 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3013153 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||| || |||||| ||||| | Sbjct 3013154 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATT 3013213 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | ||||| || ||||| |||| || || || Sbjct 3013214 ATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 3013273 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 3013274 AAAGATCTGCAT 3013285 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || ||||| || | || || || ||| || |||||||||||||| || Sbjct 30648669 CTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACTGTCCTCAAGCTGCTTGCCGGCAAA 30648728 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| ||||||| ||| | | Sbjct 30648729 GATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 30648788 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || || | |||||||| || || |||| || || || Sbjct 30648789 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 30648848 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 30648849 AAAGATCTGCAT 30648860 >seq8 Length=28014461 Score = 136 bits (150), Expect = 4e-27 Identities = 150/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || |||||||||||||||||||| Sbjct 3565235 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3565176 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | ||||||||| |||||| ||| | ||| Sbjct 3565175 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3565117 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| |||| ||||||||| || |||||||| || || | Sbjct 3565116 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3565057 Query 46581 CAAAGATTTGCATTTTG 46597 | ||||| ||||| ||| Sbjct 3565056 CGAAGATCTGCATCTTG 3565040 Score = 125 bits (138), Expect = 8e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | |||||| ||||| || |||||| ||||| ||||| || | || | ||| | Sbjct 24290987 ACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGCGCGGCC 24290928 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| || || |||| |||||||| || | || | || |||||| Sbjct 24290927 ATCCTCGAGCTGCTTGCCAGCCAAGATCAGTCGCTGCTGATCCGGGGGAATGCCCTCCTT 24290868 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| | ||| ||| | | | ||||| ||| || || |||| || | Sbjct 24290867 GTCCTGAATCTT-TGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAA 24290809 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||||||||| |||| || || ||||||||||||||| Sbjct 24290808 TGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 24290771 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||| |||||| |||||||||||||| | | | ||| |||| || Sbjct 24290753 CACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAGCCGGGGCGCGTCCGTCCTC 24290694 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || |||||||||||||| || | || |||||||||| Sbjct 24290693 GAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCCTTGTCCTG 24290634 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||| | | | | || || || || || || | ||| ||||| || Sbjct 24290633 AATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTT 24290574 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || ||||| || ||||| Sbjct 24290573 TCCGGTCAGGGTCTTGACAAAAATCTGCAT 24290544 Score = 104 bits (114), Expect = 3e-17 Identities = 141/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || || |||||||||||||| || Sbjct 22387325 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAA 22387266 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||||||| ||||||| ||| | ||| Sbjct 22387265 AATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 22387207 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | ||| ||||| ||||| || || || || | Sbjct 22387206 TGTCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCA 22387147 Query 46581 CAAAGATTTGCATT 46594 | ||||| |||||| Sbjct 22387146 CGAAGATCTGCATT 22387133 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| | || |||||| | || |||||||||||||| ||||| Sbjct 22386868 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 22386809 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 22386808 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 22386749 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || || || || || | || ||||| ||||| || || || || ||| Sbjct 22386748 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTAAGAGTCTTCACA 22386689 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 22386688 AAGATCTGCAT 22386678 Score = 102 bits (112), Expect = 9e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| || || |||||||||| || || || | || || Sbjct 22387799 CACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTC 22387740 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||||||||| |||| |||||||||||| | || | | ||||||||| Sbjct 22387739 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTG 22387680 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | | | | || || |||| || || |||| || ||||| Sbjct 22387679 GATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTC---TCAACCTCCAGAGTAATGGT 22387623 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || || || ||||| ||||| Sbjct 22387622 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 22387590 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | || || | | || |||||||||||||| || || Sbjct 22387097 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 22387038 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | | |||||||||| |||||| | | | | ||| Sbjct 22387037 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTT-TGCCTTAACGT 22386979 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | || || || || || || | ||||| || ||||| |||| || || | Sbjct 22386978 TGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 22386919 Query 46581 CAAAGATTTGCAT 46593 ||||||||||||| Sbjct 22386918 CAAAGATTTGCAT 22386906 >seq7 Length=28646061 Score = 123 bits (136), Expect = 3e-23 Identities = 151/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || || ||||||||||| ||||| Sbjct 26600250 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 26600191 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 26600190 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 26600131 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| ||||| || || || || || Sbjct 26600130 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 26600071 Query 46582 AAAGATTTGCATTTTGCACAAACAA 46606 |||||| |||| | |||||| |||| Sbjct 26600070 AAAGATCTGCA-TCTGCACACACAA 26600047 Score = 122 bits (134), Expect = 1e-22 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| || ||||||| || ||||| | Sbjct 24916790 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCA 24916731 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | |||||||||||| | || | || |||||| Sbjct 24916730 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTA 24916671 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||| | ||| | | | ||||| || || || |||| ||||| Sbjct 24916670 TCCTGGATCTTGGCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGAT 24916612 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| || || || || || ||||| ||||| Sbjct 24916611 GGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 24916576 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || |||||| ||||| || ||||| | || ||||| |||| || Sbjct 24916328 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 24916269 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| || | |||||||||||| | || | | |||||||||| | Sbjct 24916268 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGG 24916209 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | |||||| || || || |||| ||||| || ||| Sbjct 24916208 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 24916149 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||| ||||| Sbjct 24916148 CCAGTAAGGGTCTTCACAAAGATCTGCAT 24916120 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| |||| || ||||||||||| || || Sbjct 26600927 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAA 26600868 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||||| | Sbjct 26600867 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 26600808 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||| || || || | |||||||| ||||| |||| || || || Sbjct 26600807 GTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGAC 26600748 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 26600747 GAAGATCTGCAT 26600736 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| || | ||| |||||| ||||| ||||| || | || ||||| | || || Sbjct 26601401 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 26601342 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||| || || || |||| ||||||||||| | || | || |||||||||| Sbjct 26601341 AAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 26601282 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | |||||| ||| || || || | || ||||| | Sbjct 26601281 GATCTTCGCCTTCA-CGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCT 26601223 Query 46563 TGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||| || || || ||||| ||||| Sbjct 26601222 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 26601192 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || || |||| || |||||| ||||| ||||| || | || ||||| | Sbjct 24916562 CGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCA 24916503 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||| ||||| || | |||||||||||| | || | | ||||||| Sbjct 24916502 TCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTG 24916443 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| |||||| ||| | | | | |||||| ||| || || |||| |||||| Sbjct 24916442 TCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCAACCTCCAGGGTGATG 24916383 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || || || ||||| ||||| Sbjct 24916382 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 24916348 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| | | ||||| | || || ||||||||||||||||| Sbjct 26601155 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 26601096 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 26601095 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 26601036 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | ||||||||| ||||| ||||| || || || Sbjct 26601035 GTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGAC 26600976 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 26600975 GAAGATCTGCAT 26600964 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || || ||||| || |||||| ||||| || || || | ||||| ||| | || || Sbjct 24915872 ACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCA 24915813 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| ||||| || | ||| |||||||| | || | || |||||||||| Sbjct 24915812 AGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 24915753 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||| ||| || || || |||| |||||||| ||| Sbjct 24915752 ATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTG 24915693 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| || || ||||| Sbjct 24915692 CCAGTGAGGGTCTTAACGAATATCTGCAT 24915664 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| | || ||||| | || || |||||||| || || || Sbjct 24916082 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAG 24916023 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | | |||||||||| |||||| ||| | | Sbjct 24916022 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 24915963 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| || || || |||| || ||||| ||||| || || || || || Sbjct 24915962 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACG 24915903 Query 46583 AAGATTTGCAT 46593 || |||||||| Sbjct 24915902 AATATTTGCAT 24915892 >seq11 Length=26703665 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| | || ||||| | || |||||||||||||| ||||| Sbjct 4117621 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCAGCGAA 4117680 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | | |||||| ||| ||||||| ||| | | Sbjct 4117681 GATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGCCTTCACATT 4117740 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || ||||| || | ||||||| ||||| ||||| ||||| || Sbjct 4117741 GTCGATTGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCAC 4117800 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 4117801 AAAGATCTGCAT 4117812 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/201 (71%), Gaps = 14/201 (7%) Strand=Plus/Plus Query 46409 TGGATATTGTAGTCGGATAGAGTGC-GCT--CGTCGTCGAGCTGCTTGC---CGGCGAAT 46462 ||||| | |||||||| || |||| || |||||||||||||||||| ||||| | Sbjct 4121212 TGGATGTCGTAGTCGGCGAGGGTGCTGCCGCCGTCGTCGAGCTGCTTGCTGCCGGCGGAG 4121271 Query 46463 AT-----CAAGC-GCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 | |||| |||||||||||| | | || |||||||| ||||||| ||| Sbjct 4121272 ACGTCGACAAGGTGCTGCTGGTCGGAGCGGATGCCTACCTTGTCCTGGATCTTCGCCTTC 4121331 Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||||| | | ||||||| | | ||| || | |||||||| |||| ||||| || Sbjct 4121332 A-CGTCGTCGATCGTGTCGGATGGTCTCACCTCGAGGGTGATGGTGATGCCGGTCAGAGT 4121390 Query 46576 TTTAACAAAGATTTGCATTTT 46596 || || | ||| |||||||| Sbjct 4121391 CTTCACGATGATCTGCATTTT 4121411 >seq12 Length=20407407 Score = 89.7 bits (98), Expect = 6e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 |||||| |||| || |||||| ||||| |||||||||| || ||||| |||| || Sbjct 15915700 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCATC 15915641 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 |||||||| |||||||| || | |||||||||||| | ||| Sbjct 15915640 CAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 15915599 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||||| || |||||| | || || ||||||||||||||||| Sbjct 12157666 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 12157607 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 46501 |||||| ||||| || || | || | | ||||||||| Sbjct 12157606 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 12157567 >seq6 Length=36134596 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || || ||||||||||||||||| Sbjct 322693 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 322752 Query 46462 TATCAAGCGCTGCTGGTC 46479 || | |||||||||||| Sbjct 322753 GATGAGGCGCTGCTGGTC 322770 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || | || || | |||||| || | || |||||| ||||| |||||||||| Sbjct 8965774 GCCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 8965715 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || ||||| | || || |||||||| |||||||| || | |||||||||||| | ||| Sbjct 8965714 CAGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 8965655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238315214240